EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004161 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8928 bases
Position: chrCCOE01000874.1:264619-273546
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005367	RRM_1	PF00076.22	1.9e-27	1	2
ENSACIP00000005367	RRM_1	PF00076.22	1.9e-27	2	2
ENSACIP00000005359	RRM_1	PF00076.22	3.4e-27	1	2
ENSACIP00000005359	RRM_1	PF00076.22	3.4e-27	2	2
ENSACIP00000005324	RRM_1	PF00076.22	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005489	-	585	-	ENSACIP00000005324	194 (aa)	-	-
ENSACIT00000005532	-	774	-	ENSACIP00000005367	257 (aa)	-	-
ENSACIT00000005524	-	909	-	ENSACIP00000005359	302 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004161	trnau1apa	71	31.447	ENSACIG00000018366	pabpc1b	59	31.447
ENSACIG00000004161	trnau1apa	74	31.056	ENSACIG00000004685	pabpc1a	60	31.447
ENSACIG00000004161	trnau1apa	94	45.130	ENSACIG00000001863	trnau1apb	95	45.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004161	trnau1apa	93	70.115	ENSG00000180098	TRNAU1AP	91	70.115	Homo_sapiens
ENSACIG00000004161	trnau1apa	93	98.701	ENSAPOG00000007148	TRNAU1AP	91	98.701	Acanthochromis_polyacanthus
ENSACIG00000004161	trnau1apa	98	59.933	ENSAMEG00000011367	TRNAU1AP	91	70.115	Ailuropoda_melanoleuca
ENSACIG00000004161	trnau1apa	100	88.925	ENSAOCG00000008056	trnau1apa	100	88.925	Amphiprion_ocellaris
ENSACIG00000004161	trnau1apa	100	88.925	ENSAPEG00000008868	trnau1apa	100	88.925	Amphiprion_percula
ENSACIG00000004161	trnau1apa	93	94.681	ENSATEG00000012140	trnau1apa	91	94.681	Anabas_testudineus
ENSACIG00000004161	trnau1apa	92	67.857	ENSAPLG00000002606	TRNAU1AP	95	67.857	Anas_platyrhynchos
ENSACIG00000004161	trnau1apa	91	65.909	ENSACAG00000003995	-	87	65.909	Anolis_carolinensis
ENSACIG00000004161	trnau1apa	74	38.393	ENSACAG00000004205	-	80	39.286	Anolis_carolinensis
ENSACIG00000004161	trnau1apa	93	70.115	ENSANAG00000018976	TRNAU1AP	91	70.115	Aotus_nancymaae
ENSACIG00000004161	trnau1apa	100	93.115	ENSACLG00000018515	trnau1apa	100	93.115	Astatotilapia_calliptera
ENSACIG00000004161	trnau1apa	92	71.591	ENSAMXG00000029240	-	97	71.591	Astyanax_mexicanus
ENSACIG00000004161	trnau1apa	93	71.429	ENSAMXG00000013750	trnau1apa	88	71.429	Astyanax_mexicanus
ENSACIG00000004161	trnau1apa	93	70.115	ENSBTAG00000010393	TRNAU1AP	91	70.115	Bos_taurus
ENSACIG00000004161	trnau1apa	93	70.115	ENSCJAG00000009717	TRNAU1AP	91	70.115	Callithrix_jacchus
ENSACIG00000004161	trnau1apa	93	70.115	ENSCAFG00000011735	TRNAU1AP	91	70.115	Canis_familiaris
ENSACIG00000004161	trnau1apa	93	70.115	ENSCAFG00020023584	TRNAU1AP	91	70.115	Canis_lupus_dingo
ENSACIG00000004161	trnau1apa	93	70.115	ENSCHIG00000023215	TRNAU1AP	91	70.115	Capra_hircus
ENSACIG00000004161	trnau1apa	93	70.115	ENSTSYG00000003506	TRNAU1AP	91	70.115	Carlito_syrichta
ENSACIG00000004161	trnau1apa	93	70.115	ENSCPOG00000001925	TRNAU1AP	91	70.115	Cavia_porcellus
ENSACIG00000004161	trnau1apa	93	70.115	ENSCCAG00000037506	TRNAU1AP	91	70.115	Cebus_capucinus
ENSACIG00000004161	trnau1apa	93	70.115	ENSCATG00000044617	TRNAU1AP	91	70.115	Cercocebus_atys
ENSACIG00000004161	trnau1apa	93	70.115	ENSCLAG00000008223	TRNAU1AP	91	70.115	Chinchilla_lanigera
ENSACIG00000004161	trnau1apa	93	70.115	ENSCSAG00000001014	TRNAU1AP	91	70.115	Chlorocebus_sabaeus
ENSACIG00000004161	trnau1apa	94	59.441	ENSCPBG00000000121	TRNAU1AP	92	69.737	Chrysemys_picta_bellii
ENSACIG00000004161	trnau1apa	63	48.780	ENSCSAVG00000011781	-	86	48.780	Ciona_savignyi
ENSACIG00000004161	trnau1apa	98	51.178	ENSCANG00000041949	TRNAU1AP	93	58.382	Colobus_angolensis_palliatus
ENSACIG00000004161	trnau1apa	93	70.115	ENSCGRG00001004713	Trnau1ap	91	70.115	Cricetulus_griseus_chok1gshd
ENSACIG00000004161	trnau1apa	93	70.115	ENSCGRG00000014532	Trnau1ap	91	70.115	Cricetulus_griseus_crigri
ENSACIG00000004161	trnau1apa	93	93.258	ENSCSEG00000006663	trnau1apa	92	88.298	Cynoglossus_semilaevis
ENSACIG00000004161	trnau1apa	93	92.135	ENSCVAG00000018069	trnau1apa	91	92.135	Cyprinodon_variegatus
ENSACIG00000004161	trnau1apa	99	51.780	ENSDARG00000101323	trnau1apa	95	51.780	Danio_rerio
ENSACIG00000004161	trnau1apa	93	70.115	ENSDNOG00000033009	TRNAU1AP	91	70.115	Dasypus_novemcinctus
ENSACIG00000004161	trnau1apa	68	60.452	ENSDNOG00000047959	-	92	60.452	Dasypus_novemcinctus
ENSACIG00000004161	trnau1apa	98	55.743	ENSDORG00000006349	Trnau1ap	94	70.115	Dipodomys_ordii
ENSACIG00000004161	trnau1apa	93	34.663	FBgn0031607	CG15440	96	34.969	Drosophila_melanogaster
ENSACIG00000004161	trnau1apa	92	77.273	ENSETEG00000012594	TRNAU1AP	89	77.273	Echinops_telfairi
ENSACIG00000004161	trnau1apa	71	46.591	ENSEBUG00000006349	-	63	46.591	Eptatretus_burgeri
ENSACIG00000004161	trnau1apa	51	42.208	ENSEBUG00000004709	-	81	42.208	Eptatretus_burgeri
ENSACIG00000004161	trnau1apa	93	70.115	ENSEASG00005010062	TRNAU1AP	91	70.115	Equus_asinus_asinus
ENSACIG00000004161	trnau1apa	93	70.115	ENSECAG00000012980	TRNAU1AP	91	70.115	Equus_caballus
ENSACIG00000004161	trnau1apa	93	87.640	ENSELUG00000017686	trnau1apa	90	87.640	Esox_lucius
ENSACIG00000004161	trnau1apa	93	81.818	ENSELUG00000022790	-	95	81.818	Esox_lucius
ENSACIG00000004161	trnau1apa	93	70.115	ENSFCAG00000013401	TRNAU1AP	91	70.115	Felis_catus
ENSACIG00000004161	trnau1apa	92	69.737	ENSFALG00000001371	TRNAU1AP	92	69.737	Ficedula_albicollis
ENSACIG00000004161	trnau1apa	93	70.115	ENSFDAG00000018599	TRNAU1AP	91	70.115	Fukomys_damarensis
ENSACIG00000004161	trnau1apa	81	86.697	ENSFHEG00000018232	trnau1apa	88	88.298	Fundulus_heteroclitus
ENSACIG00000004161	trnau1apa	98	83.784	ENSGMOG00000016508	trnau1apa	86	83.784	Gadus_morhua
ENSACIG00000004161	trnau1apa	69	38.532	ENSGALG00000012721	C2H6orf52	79	42.411	Gallus_gallus
ENSACIG00000004161	trnau1apa	93	68.966	ENSGALG00000001310	-	93	68.966	Gallus_gallus
ENSACIG00000004161	trnau1apa	76	87.234	ENSGAFG00000004928	trnau1apa	93	92.135	Gambusia_affinis
ENSACIG00000004161	trnau1apa	100	95.506	ENSGACG00000001443	trnau1apa	93	95.506	Gasterosteus_aculeatus
ENSACIG00000004161	trnau1apa	94	59.441	ENSGAGG00000004940	TRNAU1AP	92	69.737	Gopherus_agassizii
ENSACIG00000004161	trnau1apa	93	70.115	ENSGGOG00000003511	TRNAU1AP	91	70.115	Gorilla_gorilla
ENSACIG00000004161	trnau1apa	100	91.290	ENSHBUG00000002510	trnau1apa	100	91.290	Haplochromis_burtoni
ENSACIG00000004161	trnau1apa	93	70.115	ENSHGLG00000010380	TRNAU1AP	91	70.115	Heterocephalus_glaber_female
ENSACIG00000004161	trnau1apa	93	63.218	ENSHGLG00100012699	TRNAU1AP	98	58.923	Heterocephalus_glaber_male
ENSACIG00000004161	trnau1apa	93	82.979	ENSHCOG00000014770	trnau1apa	91	82.979	Hippocampus_comes
ENSACIG00000004161	trnau1apa	93	70.115	ENSSTOG00000000079	TRNAU1AP	91	70.115	Ictidomys_tridecemlineatus
ENSACIG00000004161	trnau1apa	93	70.115	ENSJJAG00000010128	Trnau1ap	91	70.115	Jaculus_jaculus
ENSACIG00000004161	trnau1apa	93	93.258	ENSKMAG00000001230	trnau1apa	91	93.258	Kryptolebias_marmoratus
ENSACIG00000004161	trnau1apa	93	90.426	ENSLBEG00000011683	trnau1apa	100	82.803	Labrus_bergylta
ENSACIG00000004161	trnau1apa	96	53.103	ENSLACG00000005541	TRNAU1AP	98	54.483	Latimeria_chalumnae
ENSACIG00000004161	trnau1apa	93	75.000	ENSLOCG00000004041	trnau1apa	92	75.000	Lepisosteus_oculatus
ENSACIG00000004161	trnau1apa	93	71.264	ENSLAFG00000007628	TRNAU1AP	91	71.264	Loxodonta_africana
ENSACIG00000004161	trnau1apa	93	70.115	ENSMFAG00000043751	TRNAU1AP	91	70.115	Macaca_fascicularis
ENSACIG00000004161	trnau1apa	93	70.115	ENSMMUG00000006561	TRNAU1AP	91	70.115	Macaca_mulatta
ENSACIG00000004161	trnau1apa	93	70.115	ENSMNEG00000044201	TRNAU1AP	91	70.115	Macaca_nemestrina
ENSACIG00000004161	trnau1apa	93	70.115	ENSMLEG00000015649	TRNAU1AP	91	70.115	Mandrillus_leucophaeus
ENSACIG00000004161	trnau1apa	93	93.617	ENSMAMG00000001247	trnau1apa	93	93.617	Mastacembelus_armatus
ENSACIG00000004161	trnau1apa	100	93.115	ENSMZEG00005017722	trnau1apa	100	93.115	Maylandia_zebra
ENSACIG00000004161	trnau1apa	92	70.000	ENSMGAG00000002105	TRNAU1AP	92	70.000	Meleagris_gallopavo
ENSACIG00000004161	trnau1apa	93	70.115	ENSMICG00000008386	TRNAU1AP	91	70.115	Microcebus_murinus
ENSACIG00000004161	trnau1apa	93	70.115	ENSMOCG00000011189	Trnau1ap	91	70.115	Microtus_ochrogaster
ENSACIG00000004161	trnau1apa	93	83.133	ENSMMOG00000012107	trnau1apa	91	83.133	Mola_mola
ENSACIG00000004161	trnau1apa	98	58.923	ENSMODG00000010927	TRNAU1AP	98	59.596	Monodelphis_domestica
ENSACIG00000004161	trnau1apa	93	97.297	ENSMALG00000016778	trnau1apa	91	96.629	Monopterus_albus
ENSACIG00000004161	trnau1apa	93	70.115	MGP_CAROLIEiJ_G0026563	Trnau1ap	91	70.115	Mus_caroli
ENSACIG00000004161	trnau1apa	93	70.115	ENSMUSG00000028898	Trnau1ap	91	70.115	Mus_musculus
ENSACIG00000004161	trnau1apa	98	59.596	MGP_PahariEiJ_G0028896	Trnau1ap	84	77.966	Mus_pahari
ENSACIG00000004161	trnau1apa	93	70.115	MGP_SPRETEiJ_G0027544	Trnau1ap	91	70.115	Mus_spretus
ENSACIG00000004161	trnau1apa	99	59.667	ENSMPUG00000015511	TRNAU1AP	91	70.115	Mustela_putorius_furo
ENSACIG00000004161	trnau1apa	93	70.115	ENSMLUG00000012586	TRNAU1AP	91	70.115	Myotis_lucifugus
ENSACIG00000004161	trnau1apa	98	59.933	ENSNGAG00000015881	Trnau1ap	98	60.943	Nannospalax_galili
ENSACIG00000004161	trnau1apa	100	80.656	ENSNBRG00000001758	trnau1apa	99	80.656	Neolamprologus_brichardi
ENSACIG00000004161	trnau1apa	93	70.115	ENSNLEG00000009822	TRNAU1AP	91	70.115	Nomascus_leucogenys
ENSACIG00000004161	trnau1apa	92	71.250	ENSMEUG00000006117	TRNAU1AP	92	71.250	Notamacropus_eugenii
ENSACIG00000004161	trnau1apa	77	64.368	ENSOPRG00000007084	-	58	64.368	Ochotona_princeps
ENSACIG00000004161	trnau1apa	93	70.115	ENSODEG00000002970	TRNAU1AP	91	70.115	Octodon_degus
ENSACIG00000004161	trnau1apa	80	93.061	ENSONIG00000004715	trnau1apa	97	93.061	Oreochromis_niloticus
ENSACIG00000004161	trnau1apa	92	61.176	ENSOANG00000005325	-	94	49.286	Ornithorhynchus_anatinus
ENSACIG00000004161	trnau1apa	93	59.770	ENSOCUG00000002353	-	91	59.770	Oryctolagus_cuniculus
ENSACIG00000004161	trnau1apa	84	54.023	ENSOCUG00000006834	-	98	49.618	Oryctolagus_cuniculus
ENSACIG00000004161	trnau1apa	98	58.249	ENSOCUG00000011704	-	91	68.966	Oryctolagus_cuniculus
ENSACIG00000004161	trnau1apa	93	94.382	ENSORLG00000010428	trnau1apa	91	94.382	Oryzias_latipes
ENSACIG00000004161	trnau1apa	93	94.382	ENSORLG00020000926	trnau1ap	91	94.382	Oryzias_latipes_hni
ENSACIG00000004161	trnau1apa	93	94.382	ENSORLG00015009858	trnau1ap	91	94.382	Oryzias_latipes_hsok
ENSACIG00000004161	trnau1apa	93	94.382	ENSOMEG00000007873	trnau1apa	91	94.382	Oryzias_melastigma
ENSACIG00000004161	trnau1apa	93	70.115	ENSOGAG00000002274	TRNAU1AP	91	70.115	Otolemur_garnettii
ENSACIG00000004161	trnau1apa	93	70.115	ENSOARG00000002843	TRNAU1AP	91	70.115	Ovis_aries
ENSACIG00000004161	trnau1apa	93	70.115	ENSPPAG00000033927	TRNAU1AP	91	70.115	Pan_paniscus
ENSACIG00000004161	trnau1apa	93	70.115	ENSPPRG00000004416	TRNAU1AP	91	70.115	Panthera_pardus
ENSACIG00000004161	trnau1apa	93	70.115	ENSPTIG00000016677	TRNAU1AP	91	70.115	Panthera_tigris_altaica
ENSACIG00000004161	trnau1apa	89	55.422	ENSPTRG00000000434	-	86	70.312	Pan_troglodytes
ENSACIG00000004161	trnau1apa	93	70.115	ENSPANG00000016019	TRNAU1AP	91	70.115	Papio_anubis
ENSACIG00000004161	trnau1apa	92	81.818	ENSPKIG00000022205	-	93	66.848	Paramormyrops_kingsleyae
ENSACIG00000004161	trnau1apa	93	76.136	ENSPKIG00000015511	trnau1apa	89	76.136	Paramormyrops_kingsleyae
ENSACIG00000004161	trnau1apa	94	59.441	ENSPSIG00000006864	TRNAU1AP	92	69.737	Pelodiscus_sinensis
ENSACIG00000004161	trnau1apa	93	86.364	ENSPMGG00000023893	trnau1apa	89	86.364	Periophthalmus_magnuspinnatus
ENSACIG00000004161	trnau1apa	93	68.966	ENSPEMG00000007877	Trnau1ap	91	68.966	Peromyscus_maniculatus_bairdii
ENSACIG00000004161	trnau1apa	67	54.237	ENSPMAG00000000592	trnau1apa	97	54.237	Petromyzon_marinus
ENSACIG00000004161	trnau1apa	71	62.500	ENSPMAG00000005934	trnau1apa	93	62.500	Petromyzon_marinus
ENSACIG00000004161	trnau1apa	93	92.135	ENSPFOG00000008100	trnau1apa	91	92.135	Poecilia_formosa
ENSACIG00000004161	trnau1apa	93	86.585	ENSPLAG00000010236	trnau1apa	91	92.208	Poecilia_latipinna
ENSACIG00000004161	trnau1apa	93	91.358	ENSPMEG00000016387	trnau1apa	87	91.358	Poecilia_mexicana
ENSACIG00000004161	trnau1apa	93	80.851	ENSPREG00000019821	trnau1apa	95	84.444	Poecilia_reticulata
ENSACIG00000004161	trnau1apa	78	70.690	ENSPPYG00000001639	-	95	54.724	Pongo_abelii
ENSACIG00000004161	trnau1apa	97	48.805	ENSPCOG00000023470	-	95	52.227	Propithecus_coquereli
ENSACIG00000004161	trnau1apa	93	70.115	ENSPCOG00000027712	-	91	70.115	Propithecus_coquereli
ENSACIG00000004161	trnau1apa	93	70.115	ENSPVAG00000017214	TRNAU1AP	91	70.115	Pteropus_vampyrus
ENSACIG00000004161	trnau1apa	100	91.613	ENSPNYG00000010130	trnau1apa	100	91.613	Pundamilia_nyererei
ENSACIG00000004161	trnau1apa	93	69.663	ENSPNAG00000024905	trnau1apa	88	69.663	Pygocentrus_nattereri
ENSACIG00000004161	trnau1apa	83	60.714	ENSRNOG00000055344	Trnau1ap	93	70.115	Rattus_norvegicus
ENSACIG00000004161	trnau1apa	93	70.115	ENSRBIG00000029083	TRNAU1AP	91	70.115	Rhinopithecus_bieti
ENSACIG00000004161	trnau1apa	93	70.115	ENSRROG00000029128	TRNAU1AP	91	70.115	Rhinopithecus_roxellana
ENSACIG00000004161	trnau1apa	93	70.115	ENSSBOG00000021299	TRNAU1AP	91	70.115	Saimiri_boliviensis_boliviensis
ENSACIG00000004161	trnau1apa	98	58.923	ENSSHAG00000008108	TRNAU1AP	91	70.115	Sarcophilus_harrisii
ENSACIG00000004161	trnau1apa	93	92.135	ENSSMAG00000020851	trnau1apa	91	92.135	Scophthalmus_maximus
ENSACIG00000004161	trnau1apa	93	96.629	ENSSDUG00000011734	trnau1apa	91	96.629	Seriola_dumerili
ENSACIG00000004161	trnau1apa	100	71.192	ENSSLDG00000012101	trnau1apa	99	71.192	Seriola_lalandi_dorsalis
ENSACIG00000004161	trnau1apa	96	59.655	ENSSARG00000007536	TRNAU1AP	92	71.250	Sorex_araneus
ENSACIG00000004161	trnau1apa	93	66.667	ENSSPUG00000010400	-	92	66.667	Sphenodon_punctatus
ENSACIG00000004161	trnau1apa	63	52.381	ENSSPUG00000010415	-	99	52.381	Sphenodon_punctatus
ENSACIG00000004161	trnau1apa	93	97.753	ENSSPAG00000005029	trnau1apa	91	97.753	Stegastes_partitus
ENSACIG00000004161	trnau1apa	93	70.115	ENSSSCG00000030284	TRNAU1AP	91	70.115	Sus_scrofa
ENSACIG00000004161	trnau1apa	69	41.627	ENSTGUG00000005908	-	99	43.541	Taeniopygia_guttata
ENSACIG00000004161	trnau1apa	96	59.310	ENSTGUG00000000735	-	92	70.000	Taeniopygia_guttata
ENSACIG00000004161	trnau1apa	93	95.506	ENSTRUG00000003352	trnau1apa	91	95.506	Takifugu_rubripes
ENSACIG00000004161	trnau1apa	98	92.135	ENSTNIG00000006129	trnau1apa	97	92.135	Tetraodon_nigroviridis
ENSACIG00000004161	trnau1apa	92	80.000	ENSTBEG00000008049	-	84	80.000	Tupaia_belangeri
ENSACIG00000004161	trnau1apa	93	70.115	ENSTTRG00000001854	TRNAU1AP	91	70.115	Tursiops_truncatus
ENSACIG00000004161	trnau1apa	94	59.441	ENSUAMG00000008789	TRNAU1AP	92	71.053	Ursus_americanus
ENSACIG00000004161	trnau1apa	93	70.115	ENSUMAG00000011068	TRNAU1AP	91	70.115	Ursus_maritimus
ENSACIG00000004161	trnau1apa	98	52.475	ENSVPAG00000006778	TRNAU1AP	99	53.398	Vicugna_pacos
ENSACIG00000004161	trnau1apa	98	58.784	ENSVVUG00000012518	TRNAU1AP	85	68.235	Vulpes_vulpes
ENSACIG00000004161	trnau1apa	93	92.135	ENSXMAG00000017361	trnau1apa	91	92.135	Xiphophorus_maculatus