EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000004169 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 8891 bases
Position: chrCCOE01000690.1:2147092-2155982
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005320	POP1	PF06978.11	2.3e-36	1	2
ENSACIP00000005320	POP1	PF06978.11	2.3e-36	2	2
ENSACIP00000005320	POPLD	PF08170.12	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005485	POP1-201	2841	-	ENSACIP00000005320	946 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004169	POP1	100	46.565	ENSG00000104356	POP1	90	49.575	Homo_sapiens
ENSACIG00000004169	POP1	100	75.810	ENSAPOG00000008198	pop1	100	76.316	Acanthochromis_polyacanthus
ENSACIG00000004169	POP1	100	46.411	ENSAMEG00000000556	POP1	90	49.414	Ailuropoda_melanoleuca
ENSACIG00000004169	POP1	100	75.479	ENSAOCG00000010991	pop1	100	76.488	Amphiprion_ocellaris
ENSACIG00000004169	POP1	100	74.588	ENSAPEG00000007607	pop1	100	75.103	Amphiprion_percula
ENSACIG00000004169	POP1	100	71.891	ENSATEG00000024814	POP1	100	72.995	Anabas_testudineus
ENSACIG00000004169	POP1	93	49.679	ENSAPLG00000014418	POP1	97	49.679	Anas_platyrhynchos
ENSACIG00000004169	POP1	93	48.243	ENSACAG00000016083	POP1	100	46.065	Anolis_carolinensis
ENSACIG00000004169	POP1	88	52.994	ENSANAG00000026360	POP1	90	66.245	Aotus_nancymaae
ENSACIG00000004169	POP1	100	81.818	ENSACLG00000010951	pop1	100	82.996	Astatotilapia_calliptera
ENSACIG00000004169	POP1	100	56.114	ENSAMXG00000014483	POP1	100	56.114	Astyanax_mexicanus
ENSACIG00000004169	POP1	100	47.348	ENSBTAG00000012596	POP1	100	47.495	Bos_taurus
ENSACIG00000004169	POP1	64	30.028	WBGene00015486	C05D11.9	98	30.028	Caenorhabditis_elegans
ENSACIG00000004169	POP1	100	46.679	ENSCJAG00000015567	POP1	91	49.364	Callithrix_jacchus
ENSACIG00000004169	POP1	100	47.925	ENSCAFG00000000469	POP1	100	47.332	Canis_familiaris
ENSACIG00000004169	POP1	100	46.917	ENSCAFG00020026765	POP1	100	46.339	Canis_lupus_dingo
ENSACIG00000004169	POP1	100	46.731	ENSCHIG00000017066	POP1	100	47.449	Capra_hircus
ENSACIG00000004169	POP1	100	46.654	ENSTSYG00000003097	POP1	100	46.750	Carlito_syrichta
ENSACIG00000004169	POP1	100	45.351	ENSCAPG00000007251	POP1	90	47.739	Cavia_aperea
ENSACIG00000004169	POP1	100	46.648	ENSCPOG00000002901	POP1	90	49.309	Cavia_porcellus
ENSACIG00000004169	POP1	100	47.133	ENSCCAG00000018939	POP1	91	49.363	Cebus_capucinus
ENSACIG00000004169	POP1	100	46.220	ENSCATG00000040916	POP1	90	49.257	Cercocebus_atys
ENSACIG00000004169	POP1	100	47.217	ENSCLAG00000007208	POP1	87	50.160	Chinchilla_lanigera
ENSACIG00000004169	POP1	93	49.363	ENSCSAG00000012340	POP1	99	49.417	Chlorocebus_sabaeus
ENSACIG00000004169	POP1	93	47.609	ENSCHOG00000011432	POP1	94	47.821	Choloepus_hoffmanni
ENSACIG00000004169	POP1	100	49.079	ENSCPBG00000006373	POP1	100	49.273	Chrysemys_picta_bellii
ENSACIG00000004169	POP1	90	33.000	ENSCING00000008323	-	90	35.827	Ciona_intestinalis
ENSACIG00000004169	POP1	100	46.029	ENSCANG00000001647	POP1	90	49.045	Colobus_angolensis_palliatus
ENSACIG00000004169	POP1	92	49.134	ENSCGRG00001017308	Pop1	90	49.251	Cricetulus_griseus_chok1gshd
ENSACIG00000004169	POP1	100	44.083	ENSCGRG00000010824	Pop1	100	44.280	Cricetulus_griseus_crigri
ENSACIG00000004169	POP1	100	65.392	ENSCSEG00000008737	POP1	100	65.694	Cynoglossus_semilaevis
ENSACIG00000004169	POP1	100	68.159	ENSCVAG00000022248	pop1	100	68.008	Cyprinodon_variegatus
ENSACIG00000004169	POP1	51	53.252	ENSDARG00000102087	pop1	99	53.659	Danio_rerio
ENSACIG00000004169	POP1	100	43.377	ENSDNOG00000019974	POP1	100	43.937	Dasypus_novemcinctus
ENSACIG00000004169	POP1	93	43.631	ENSDORG00000015384	Pop1	89	43.897	Dipodomys_ordii
ENSACIG00000004169	POP1	64	34.135	FBgn0026702	l(1)G0045	76	32.855	Drosophila_melanogaster
ENSACIG00000004169	POP1	88	45.470	ENSETEG00000007839	POP1	88	45.470	Echinops_telfairi
ENSACIG00000004169	POP1	51	44.332	ENSEBUG00000009897	pop1	96	44.332	Eptatretus_burgeri
ENSACIG00000004169	POP1	100	47.110	ENSEASG00005003189	POP1	98	47.206	Equus_asinus_asinus
ENSACIG00000004169	POP1	100	47.206	ENSECAG00000024236	POP1	100	47.495	Equus_caballus
ENSACIG00000004169	POP1	53	76.623	ENSEEUG00000003050	-	54	76.623	Erinaceus_europaeus
ENSACIG00000004169	POP1	100	60.383	ENSELUG00000003526	pop1	100	60.988	Esox_lucius
ENSACIG00000004169	POP1	100	46.872	ENSFCAG00000002168	POP1	100	47.064	Felis_catus
ENSACIG00000004169	POP1	100	46.146	ENSFALG00000005711	POP1	100	46.191	Ficedula_albicollis
ENSACIG00000004169	POP1	100	46.154	ENSFDAG00000017068	POP1	90	48.780	Fukomys_damarensis
ENSACIG00000004169	POP1	100	68.941	ENSFHEG00000019518	pop1	100	69.043	Fundulus_heteroclitus
ENSACIG00000004169	POP1	100	60.888	ENSGMOG00000000659	POP1	100	61.197	Gadus_morhua
ENSACIG00000004169	POP1	100	67.205	ENSGAFG00000019770	POP1	100	67.713	Gambusia_affinis
ENSACIG00000004169	POP1	100	63.429	ENSGACG00000003499	pop1	100	64.504	Gasterosteus_aculeatus
ENSACIG00000004169	POP1	100	48.123	ENSGAGG00000011737	POP1	98	48.123	Gopherus_agassizii
ENSACIG00000004169	POP1	93	49.575	ENSGGOG00000003176	POP1	90	49.894	Gorilla_gorilla
ENSACIG00000004169	POP1	100	82.020	ENSHBUG00000021583	pop1	100	83.198	Haplochromis_burtoni
ENSACIG00000004169	POP1	100	45.774	ENSHGLG00000006029	POP1	90	48.993	Heterocephalus_glaber_female
ENSACIG00000004169	POP1	100	45.774	ENSHGLG00100016879	POP1	90	48.993	Heterocephalus_glaber_male
ENSACIG00000004169	POP1	100	64.510	ENSHCOG00000013888	pop1	100	64.510	Hippocampus_comes
ENSACIG00000004169	POP1	100	54.028	ENSIPUG00000018336	pop1	100	54.028	Ictalurus_punctatus
ENSACIG00000004169	POP1	100	46.660	ENSSTOG00000011455	POP1	87	48.995	Ictidomys_tridecemlineatus
ENSACIG00000004169	POP1	100	45.768	ENSJJAG00000013325	Pop1	100	45.965	Jaculus_jaculus
ENSACIG00000004169	POP1	100	71.443	ENSKMAG00000001346	POP1	100	71.312	Kryptolebias_marmoratus
ENSACIG00000004169	POP1	100	68.130	ENSLBEG00000024457	POP1	100	68.130	Labrus_bergylta
ENSACIG00000004169	POP1	97	50.352	ENSLACG00000012498	POP1	99	50.553	Latimeria_chalumnae
ENSACIG00000004169	POP1	100	52.418	ENSLOCG00000009817	POP1	100	52.515	Lepisosteus_oculatus
ENSACIG00000004169	POP1	93	50.641	ENSLAFG00000010770	POP1	100	47.897	Loxodonta_africana
ENSACIG00000004169	POP1	100	46.220	ENSMFAG00000000347	POP1	90	49.045	Macaca_fascicularis
ENSACIG00000004169	POP1	100	46.367	ENSMNEG00000036870	POP1	90	49.205	Macaca_nemestrina
ENSACIG00000004169	POP1	100	46.603	ENSMLEG00000034986	POP1	90	49.469	Mandrillus_leucophaeus
ENSACIG00000004169	POP1	100	71.847	ENSMAMG00000004040	pop1	100	72.105	Mastacembelus_armatus
ENSACIG00000004169	POP1	100	82.020	ENSMZEG00005025448	pop1	100	83.198	Maylandia_zebra
ENSACIG00000004169	POP1	100	45.042	ENSMGAG00000012167	POP1	100	45.480	Meleagris_gallopavo
ENSACIG00000004169	POP1	100	46.273	ENSMAUG00000017537	Pop1	100	46.273	Mesocricetus_auratus
ENSACIG00000004169	POP1	100	45.638	ENSMICG00000004361	POP1	90	48.195	Microcebus_murinus
ENSACIG00000004169	POP1	93	49.149	ENSMOCG00000006356	Pop1	90	48.830	Microtus_ochrogaster
ENSACIG00000004169	POP1	100	67.745	ENSMMOG00000018242	pop1	100	67.675	Mola_mola
ENSACIG00000004169	POP1	93	48.305	ENSMODG00000006561	POP1	89	48.305	Monodelphis_domestica
ENSACIG00000004169	POP1	100	70.850	ENSMALG00000012621	POP1	100	71.414	Monopterus_albus
ENSACIG00000004169	POP1	100	45.954	MGP_CAROLIEiJ_G0019726	Pop1	100	46.146	Mus_caroli
ENSACIG00000004169	POP1	100	45.865	ENSMUSG00000022325	Pop1	100	46.058	Mus_musculus
ENSACIG00000004169	POP1	100	45.314	MGP_PahariEiJ_G0019735	Pop1	90	47.747	Mus_pahari
ENSACIG00000004169	POP1	100	46.102	MGP_SPRETEiJ_G0020622	Pop1	100	46.198	Mus_spretus
ENSACIG00000004169	POP1	100	47.510	ENSMPUG00000015250	POP1	100	47.414	Mustela_putorius_furo
ENSACIG00000004169	POP1	100	45.038	ENSMLUG00000010204	POP1	100	45.038	Myotis_lucifugus
ENSACIG00000004169	POP1	93	49.043	ENSNGAG00000001582	Pop1	90	49.043	Nannospalax_galili
ENSACIG00000004169	POP1	100	82.878	ENSNBRG00000002356	pop1	100	82.878	Neolamprologus_brichardi
ENSACIG00000004169	POP1	100	46.986	ENSNLEG00000002541	POP1	90	50.106	Nomascus_leucogenys
ENSACIG00000004169	POP1	81	57.460	ENSMEUG00000003118	POP1	88	57.460	Notamacropus_eugenii
ENSACIG00000004169	POP1	100	46.673	ENSOPRG00000007667	POP1	100	46.622	Ochotona_princeps
ENSACIG00000004169	POP1	100	46.353	ENSODEG00000003984	POP1	90	49.787	Octodon_degus
ENSACIG00000004169	POP1	100	82.626	ENSONIG00000016445	pop1	100	83.603	Oreochromis_niloticus
ENSACIG00000004169	POP1	59	46.535	ENSOANG00000001278	-	94	46.535	Ornithorhynchus_anatinus
ENSACIG00000004169	POP1	100	46.154	ENSOCUG00000017400	POP1	90	48.732	Oryctolagus_cuniculus
ENSACIG00000004169	POP1	100	68.103	ENSORLG00000002839	pop1	100	68.615	Oryzias_latipes
ENSACIG00000004169	POP1	100	66.463	ENSORLG00020022450	POP1	100	66.463	Oryzias_latipes_hni
ENSACIG00000004169	POP1	100	68.270	ENSORLG00015012746	POP1	100	68.884	Oryzias_latipes_hsok
ENSACIG00000004169	POP1	100	66.598	ENSOMEG00000006915	pop1	99	67.593	Oryzias_melastigma
ENSACIG00000004169	POP1	93	48.421	ENSOGAG00000001466	POP1	90	49.151	Otolemur_garnettii
ENSACIG00000004169	POP1	100	46.851	ENSPPAG00000018410	POP1	90	49.894	Pan_paniscus
ENSACIG00000004169	POP1	100	46.923	ENSPPRG00000005002	POP1	100	46.980	Panthera_pardus
ENSACIG00000004169	POP1	100	47.115	ENSPTIG00000016527	POP1	100	47.115	Panthera_tigris_altaica
ENSACIG00000004169	POP1	100	46.947	ENSPTRG00000020458	POP1	90	50.000	Pan_troglodytes
ENSACIG00000004169	POP1	100	46.699	ENSPANG00000009704	POP1	90	49.575	Papio_anubis
ENSACIG00000004169	POP1	100	57.387	ENSPKIG00000016325	POP1	100	57.688	Paramormyrops_kingsleyae
ENSACIG00000004169	POP1	100	47.353	ENSPSIG00000012343	POP1	89	50.807	Pelodiscus_sinensis
ENSACIG00000004169	POP1	100	62.335	ENSPMGG00000022253	POP1	100	62.640	Periophthalmus_magnuspinnatus
ENSACIG00000004169	POP1	99	46.503	ENSPEMG00000023633	Pop1	90	48.796	Peromyscus_maniculatus_bairdii
ENSACIG00000004169	POP1	93	42.947	ENSPMAG00000003209	POP1	100	42.947	Petromyzon_marinus
ENSACIG00000004169	POP1	93	47.084	ENSPCIG00000012216	POP1	89	47.402	Phascolarctos_cinereus
ENSACIG00000004169	POP1	100	67.275	ENSPFOG00000012490	POP1	100	67.781	Poecilia_formosa
ENSACIG00000004169	POP1	100	66.768	ENSPLAG00000004646	POP1	100	67.275	Poecilia_latipinna
ENSACIG00000004169	POP1	100	67.411	ENSPMEG00000019592	POP1	100	67.919	Poecilia_mexicana
ENSACIG00000004169	POP1	100	66.431	ENSPREG00000020951	POP1	100	66.936	Poecilia_reticulata
ENSACIG00000004169	POP1	93	49.258	ENSPPYG00000018777	POP1	90	49.470	Pongo_abelii
ENSACIG00000004169	POP1	100	44.497	ENSPCAG00000016662	POP1	100	44.444	Procavia_capensis
ENSACIG00000004169	POP1	93	48.034	ENSPCOG00000019420	POP1	90	48.034	Propithecus_coquereli
ENSACIG00000004169	POP1	100	45.560	ENSPVAG00000014468	POP1	90	48.877	Pteropus_vampyrus
ENSACIG00000004169	POP1	100	83.544	ENSPNYG00000004476	pop1	100	83.544	Pundamilia_nyererei
ENSACIG00000004169	POP1	100	56.151	ENSPNAG00000000265	pop1	100	56.151	Pygocentrus_nattereri
ENSACIG00000004169	POP1	100	46.102	ENSRNOG00000005243	Pop1	100	46.295	Rattus_norvegicus
ENSACIG00000004169	POP1	100	46.411	ENSRBIG00000007996	POP1	90	49.469	Rhinopithecus_bieti
ENSACIG00000004169	POP1	100	46.411	ENSRROG00000012334	POP1	90	49.469	Rhinopithecus_roxellana
ENSACIG00000004169	POP1	93	48.887	ENSSBOG00000020830	POP1	91	48.990	Saimiri_boliviensis_boliviensis
ENSACIG00000004169	POP1	100	45.669	ENSSHAG00000000296	POP1	100	45.669	Sarcophilus_harrisii
ENSACIG00000004169	POP1	100	57.794	ENSSFOG00015007429	pop1	99	57.794	Scleropages_formosus
ENSACIG00000004169	POP1	100	72.555	ENSSMAG00000010467	POP1	100	72.871	Scophthalmus_maximus
ENSACIG00000004169	POP1	100	73.112	ENSSDUG00000007817	POP1	100	74.498	Seriola_dumerili
ENSACIG00000004169	POP1	100	73.674	ENSSLDG00000012565	POP1	100	75.100	Seriola_lalandi_dorsalis
ENSACIG00000004169	POP1	100	45.043	ENSSPUG00000003550	-	100	44.851	Sphenodon_punctatus
ENSACIG00000004169	POP1	100	76.259	ENSSPAG00000014955	pop1	100	76.259	Stegastes_partitus
ENSACIG00000004169	POP1	100	47.093	ENSSSCG00000006078	POP1	90	49.731	Sus_scrofa
ENSACIG00000004169	POP1	93	44.610	ENSTGUG00000012011	-	98	44.931	Taeniopygia_guttata
ENSACIG00000004169	POP1	100	68.763	ENSTRUG00000010856	pop1	100	68.763	Takifugu_rubripes
ENSACIG00000004169	POP1	93	67.203	ENSTNIG00000013297	pop1	96	67.738	Tetraodon_nigroviridis
ENSACIG00000004169	POP1	93	47.190	ENSTBEG00000014214	POP1	94	47.190	Tupaia_belangeri
ENSACIG00000004169	POP1	93	48.663	ENSTTRG00000016071	POP1	90	48.663	Tursiops_truncatus
ENSACIG00000004169	POP1	93	49.520	ENSUAMG00000017309	POP1	94	49.520	Ursus_americanus
ENSACIG00000004169	POP1	100	46.381	ENSUMAG00000016952	POP1	89	70.833	Ursus_maritimus
ENSACIG00000004169	POP1	85	51.103	ENSVPAG00000008278	POP1	72	68.452	Vicugna_pacos
ENSACIG00000004169	POP1	100	46.821	ENSVVUG00000010994	POP1	100	46.339	Vulpes_vulpes
ENSACIG00000004169	POP1	100	60.338	ENSXCOG00000017043	POP1	100	60.905	Xiphophorus_couchianus
ENSACIG00000004169	POP1	100	66.532	ENSXMAG00000002472	POP1	100	66.835	Xiphophorus_maculatus