EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004226 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 10013 bases
Position: chrCCOE01000440.1:1546142-1556154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005390	FAM83	PF07894.12	3.3e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005555	-	5346	-	ENSACIP00000005390	1781 (aa)	-	-
ENSACIT00000005540	-	774	-	ENSACIP00000005375	257 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004226	-	55	45.283	ENSACIG00000011141	fam83hb	71	48.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004226	-	92	61.586	ENSAPOG00000000745	-	97	62.087	Acanthochromis_polyacanthus
ENSACIG00000004226	-	98	63.089	ENSAOCG00000004401	-	99	63.629	Amphiprion_ocellaris
ENSACIG00000004226	-	98	63.166	ENSAPEG00000024662	-	99	63.707	Amphiprion_percula
ENSACIG00000004226	-	98	68.548	ENSACLG00000021078	-	99	69.321	Astatotilapia_calliptera
ENSACIG00000004226	-	54	48.148	ENSACLG00000017085	fam83hb	78	48.148	Astatotilapia_calliptera
ENSACIG00000004226	-	54	46.903	ENSAMXG00000020626	fam83hb	79	46.552	Astyanax_mexicanus
ENSACIG00000004226	-	62	44.886	ENSAMXG00000003637	-	99	44.369	Astyanax_mexicanus
ENSACIG00000004226	-	67	61.547	ENSCSEG00000017411	-	96	61.344	Cynoglossus_semilaevis
ENSACIG00000004226	-	54	48.980	ENSCSEG00000018065	fam83hb	77	49.495	Cynoglossus_semilaevis
ENSACIG00000004226	-	64	61.765	ENSCVAG00000004532	-	53	61.765	Cyprinodon_variegatus
ENSACIG00000004226	-	54	51.923	ENSDARG00000060830	fam83hb	78	51.923	Danio_rerio
ENSACIG00000004226	-	51	53.783	ENSELUG00000021435	-	83	53.783	Esox_lucius
ENSACIG00000004226	-	55	49.107	ENSELUG00000001087	fam83hb	77	49.107	Esox_lucius
ENSACIG00000004226	-	54	47.115	ENSFHEG00000013522	fam83hb	76	47.115	Fundulus_heteroclitus
ENSACIG00000004226	-	51	60.699	ENSFHEG00000019359	-	52	60.917	Fundulus_heteroclitus
ENSACIG00000004226	-	54	50.000	ENSGAFG00000011105	fam83hb	78	50.000	Gambusia_affinis
ENSACIG00000004226	-	50	61.657	ENSGAFG00000017827	-	51	61.326	Gambusia_affinis
ENSACIG00000004226	-	54	48.980	ENSHBUG00000003140	fam83hb	78	48.148	Haplochromis_burtoni
ENSACIG00000004226	-	98	68.664	ENSHBUG00000011170	-	99	68.789	Haplochromis_burtoni
ENSACIG00000004226	-	54	49.020	ENSHCOG00000019264	fam83hb	77	49.020	Hippocampus_comes
ENSACIG00000004226	-	80	54.729	ENSHCOG00000004219	-	93	55.931	Hippocampus_comes
ENSACIG00000004226	-	55	53.704	ENSIPUG00000020131	fam83h	76	53.704	Ictalurus_punctatus
ENSACIG00000004226	-	54	45.283	ENSKMAG00000006085	fam83hb	75	45.283	Kryptolebias_marmoratus
ENSACIG00000004226	-	72	60.465	ENSKMAG00000008619	-	64	59.757	Kryptolebias_marmoratus
ENSACIG00000004226	-	55	46.281	ENSLBEG00000003167	fam83hb	79	46.281	Labrus_bergylta
ENSACIG00000004226	-	70	67.568	ENSLBEG00000017805	-	75	67.568	Labrus_bergylta
ENSACIG00000004226	-	55	50.000	ENSLOCG00000005513	fam83hb	79	50.000	Lepisosteus_oculatus
ENSACIG00000004226	-	87	56.802	ENSMAMG00000015417	-	97	57.052	Mastacembelus_armatus
ENSACIG00000004226	-	98	68.481	ENSMZEG00005011038	-	99	69.252	Maylandia_zebra
ENSACIG00000004226	-	54	48.148	ENSMZEG00005004572	fam83hb	78	48.148	Maylandia_zebra
ENSACIG00000004226	-	54	47.959	ENSMMOG00000019073	fam83hb	74	47.959	Mola_mola
ENSACIG00000004226	-	50	49.495	ENSMALG00000014368	fam83hb	75	49.495	Monopterus_albus
ENSACIG00000004226	-	62	58.036	ENSMALG00000007504	-	89	58.817	Monopterus_albus
ENSACIG00000004226	-	98	68.609	ENSNBRG00000016501	-	99	68.897	Neolamprologus_brichardi
ENSACIG00000004226	-	54	48.039	ENSNBRG00000012168	fam83hb	78	47.321	Neolamprologus_brichardi
ENSACIG00000004226	-	78	85.235	ENSONIG00000010254	-	97	85.235	Oreochromis_niloticus
ENSACIG00000004226	-	54	48.980	ENSONIG00000002496	fam83hb	82	48.148	Oreochromis_niloticus
ENSACIG00000004226	-	60	76.344	ENSORLG00000029445	-	78	76.344	Oryzias_latipes
ENSACIG00000004226	-	55	76.344	ENSORLG00020005552	-	65	76.344	Oryzias_latipes_hni
ENSACIG00000004226	-	55	78.495	ENSORLG00015020652	-	65	78.495	Oryzias_latipes_hsok
ENSACIG00000004226	-	72	60.271	ENSOMEG00000017183	-	81	60.628	Oryzias_melastigma
ENSACIG00000004226	-	55	45.865	ENSPKIG00000021594	-	64	45.865	Paramormyrops_kingsleyae
ENSACIG00000004226	-	55	45.848	ENSPKIG00000011416	fam83hb	79	44.828	Paramormyrops_kingsleyae
ENSACIG00000004226	-	55	56.142	ENSPMGG00000022601	-	85	56.682	Periophthalmus_magnuspinnatus
ENSACIG00000004226	-	54	49.515	ENSPMGG00000001766	fam83hb	78	43.077	Periophthalmus_magnuspinnatus
ENSACIG00000004226	-	68	77.686	ENSPLAG00000022026	-	98	77.686	Poecilia_latipinna
ENSACIG00000004226	-	50	62.458	ENSPMEG00000020860	-	51	62.458	Poecilia_mexicana
ENSACIG00000004226	-	50	62.486	ENSPREG00000001508	-	52	62.486	Poecilia_reticulata
ENSACIG00000004226	-	98	68.616	ENSPNYG00000012210	-	99	69.343	Pundamilia_nyererei
ENSACIG00000004226	-	54	48.980	ENSPNYG00000010992	fam83hb	78	48.148	Pundamilia_nyererei
ENSACIG00000004226	-	54	52.830	ENSPNAG00000026242	fam83hb	78	52.830	Pygocentrus_nattereri
ENSACIG00000004226	-	55	48.485	ENSSFOG00015020932	fam83h	79	48.485	Scleropages_formosus
ENSACIG00000004226	-	56	49.587	ENSSFOG00015007757	-	60	49.587	Scleropages_formosus
ENSACIG00000004226	-	83	59.131	ENSSMAG00000012479	-	99	58.729	Scophthalmus_maximus
ENSACIG00000004226	-	54	49.515	ENSSMAG00000008612	fam83hb	77	49.515	Scophthalmus_maximus
ENSACIG00000004226	-	89	62.813	ENSSDUG00000005051	-	99	63.768	Seriola_dumerili
ENSACIG00000004226	-	60	71.444	ENSSLDG00000023360	-	99	66.941	Seriola_lalandi_dorsalis
ENSACIG00000004226	-	98	62.595	ENSSPAG00000021937	-	99	62.595	Stegastes_partitus
ENSACIG00000004226	-	54	48.039	ENSTRUG00000009193	fam83hb	72	48.039	Takifugu_rubripes
ENSACIG00000004226	-	51	62.242	ENSTRUG00000024578	-	89	62.894	Takifugu_rubripes
ENSACIG00000004226	-	58	74.815	ENSXCOG00000005364	-	95	74.815	Xiphophorus_couchianus
ENSACIG00000004226	-	54	50.000	ENSXCOG00000020106	fam83hb	77	50.000	Xiphophorus_couchianus
ENSACIG00000004226	-	56	58.200	ENSXMAG00000026782	-	55	58.700	Xiphophorus_maculatus
ENSACIG00000004226	-	54	50.000	ENSXMAG00000003383	fam83hb	77	50.000	Xiphophorus_maculatus