EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004344 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 22236 bases
Position: chrCCOE01000874.1:318106-340341
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005714	tRNA-synt_1g	PF09334.11	6.9e-15	1	1
ENSACIP00000005714	Anticodon_1	PF08264.13	2.4e-34	1	1
ENSACIP00000005714	tRNA-synt_1	PF00133.22	1.5e-197	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005890	-	3171	-	ENSACIP00000005714	1056 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004344	vars2	94	49.402	ENSACIG00000013752	vars	81	48.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004344	vars2	99	80.258	ENSAPOG00000007396	vars2	100	80.535	Acanthochromis_polyacanthus
ENSACIG00000004344	vars2	97	51.796	ENSAMEG00000012997	VARS2	95	51.796	Ailuropoda_melanoleuca
ENSACIG00000004344	vars2	99	80.443	ENSAOCG00000000476	vars2	100	80.720	Amphiprion_ocellaris
ENSACIG00000004344	vars2	99	80.443	ENSAPEG00000008646	vars2	97	80.720	Amphiprion_percula
ENSACIG00000004344	vars2	97	82.819	ENSATEG00000012291	vars2	99	81.698	Anabas_testudineus
ENSACIG00000004344	vars2	97	52.546	ENSACAG00000022093	VARS2	95	52.546	Anolis_carolinensis
ENSACIG00000004344	vars2	99	50.518	ENSANAG00000038018	VARS2	97	50.518	Aotus_nancymaae
ENSACIG00000004344	vars2	99	85.568	ENSACLG00000018673	vars2	100	85.568	Astatotilapia_calliptera
ENSACIG00000004344	vars2	97	70.878	ENSAMXG00000017773	vars2	97	71.689	Astyanax_mexicanus
ENSACIG00000004344	vars2	99	51.646	ENSBTAG00000010698	VARS2	97	51.646	Bos_taurus
ENSACIG00000004344	vars2	97	50.965	ENSCJAG00000019826	VARS2	95	51.062	Callithrix_jacchus
ENSACIG00000004344	vars2	95	53.627	ENSCAFG00000000454	VARS2	94	53.627	Canis_familiaris
ENSACIG00000004344	vars2	86	57.127	ENSCAFG00020019387	VARS2	93	57.112	Canis_lupus_dingo
ENSACIG00000004344	vars2	97	51.653	ENSCHIG00000007847	VARS2	98	51.601	Capra_hircus
ENSACIG00000004344	vars2	98	51.364	ENSTSYG00000009904	VARS2	98	51.364	Carlito_syrichta
ENSACIG00000004344	vars2	89	53.095	ENSCAPG00000017770	VARS2	99	53.095	Cavia_aperea
ENSACIG00000004344	vars2	99	51.080	ENSCPOG00000021834	VARS2	97	51.174	Cavia_porcellus
ENSACIG00000004344	vars2	99	50.377	ENSCCAG00000037907	VARS2	98	50.471	Cebus_capucinus
ENSACIG00000004344	vars2	97	50.613	ENSCATG00000032554	VARS2	98	50.707	Cercocebus_atys
ENSACIG00000004344	vars2	94	52.475	ENSCLAG00000002889	VARS2	93	52.673	Chinchilla_lanigera
ENSACIG00000004344	vars2	95	52.114	ENSCSAG00000008327	VARS2	94	52.212	Chlorocebus_sabaeus
ENSACIG00000004344	vars2	92	55.759	ENSCPBG00000021502	VARS2	96	55.759	Chrysemys_picta_bellii
ENSACIG00000004344	vars2	97	50.424	ENSCANG00000014991	VARS2	97	50.518	Colobus_angolensis_palliatus
ENSACIG00000004344	vars2	94	53.147	ENSCGRG00001021535	Vars2	92	53.147	Cricetulus_griseus_chok1gshd
ENSACIG00000004344	vars2	94	53.147	ENSCGRG00000014112	Vars2	92	53.147	Cricetulus_griseus_crigri
ENSACIG00000004344	vars2	99	67.842	ENSCSEG00000015432	vars2	98	78.747	Cynoglossus_semilaevis
ENSACIG00000004344	vars2	66	79.887	ENSCVAG00000017765	vars2	98	79.887	Cyprinodon_variegatus
ENSACIG00000004344	vars2	99	69.925	ENSDARG00000056717	vars2	99	69.925	Danio_rerio
ENSACIG00000004344	vars2	81	49.827	ENSDORG00000008516	Vars2	93	49.827	Dipodomys_ordii
ENSACIG00000004344	vars2	92	48.141	ENSETEG00000014844	VARS2	93	48.141	Echinops_telfairi
ENSACIG00000004344	vars2	98	51.321	ENSEASG00005019997	VARS2	94	55.556	Equus_asinus_asinus
ENSACIG00000004344	vars2	98	51.598	ENSECAG00000018202	VARS2	99	51.692	Equus_caballus
ENSACIG00000004344	vars2	98	71.132	ENSELUG00000017824	vars2	97	71.132	Esox_lucius
ENSACIG00000004344	vars2	99	51.220	ENSFCAG00000010531	VARS2	98	51.220	Felis_catus
ENSACIG00000004344	vars2	99	50.281	ENSFDAG00000017216	VARS2	98	50.281	Fukomys_damarensis
ENSACIG00000004344	vars2	94	74.826	ENSFHEG00000013932	vars2	99	74.826	Fundulus_heteroclitus
ENSACIG00000004344	vars2	91	71.458	ENSGMOG00000018960	vars2	99	71.458	Gadus_morhua
ENSACIG00000004344	vars2	96	74.160	ENSGAFG00000004737	vars2	100	74.160	Gambusia_affinis
ENSACIG00000004344	vars2	95	79.403	ENSGACG00000001464	vars2	100	79.403	Gasterosteus_aculeatus
ENSACIG00000004344	vars2	93	55.096	ENSGAGG00000011652	VARS2	98	55.096	Gopherus_agassizii
ENSACIG00000004344	vars2	97	50.330	ENSGGOG00000014587	VARS2	98	50.424	Gorilla_gorilla
ENSACIG00000004344	vars2	99	83.789	ENSHBUG00000002448	vars2	100	83.789	Haplochromis_burtoni
ENSACIG00000004344	vars2	99	49.812	ENSHGLG00000012886	VARS2	94	49.906	Heterocephalus_glaber_female
ENSACIG00000004344	vars2	99	49.719	ENSHGLG00100016535	VARS2	98	49.812	Heterocephalus_glaber_male
ENSACIG00000004344	vars2	69	78.308	ENSHCOG00000017907	vars2	97	78.308	Hippocampus_comes
ENSACIG00000004344	vars2	95	72.288	ENSIPUG00000015573	Vars2	98	70.699	Ictalurus_punctatus
ENSACIG00000004344	vars2	99	49.953	ENSSTOG00000009924	VARS2	98	50.047	Ictidomys_tridecemlineatus
ENSACIG00000004344	vars2	97	51.158	ENSJJAG00000011144	Vars2	95	51.255	Jaculus_jaculus
ENSACIG00000004344	vars2	99	76.449	ENSKMAG00000001393	vars2	99	76.449	Kryptolebias_marmoratus
ENSACIG00000004344	vars2	99	73.606	ENSLBEG00000011949	vars2	99	73.606	Labrus_bergylta
ENSACIG00000004344	vars2	53	82.826	ENSLBEG00000005480	-	81	82.790	Labrus_bergylta
ENSACIG00000004344	vars2	96	50.334	ENSLACG00000001576	-	99	50.812	Latimeria_chalumnae
ENSACIG00000004344	vars2	99	51.270	ENSLAFG00000015183	VARS2	98	51.270	Loxodonta_africana
ENSACIG00000004344	vars2	97	50.424	ENSMFAG00000042367	VARS2	98	50.518	Macaca_fascicularis
ENSACIG00000004344	vars2	97	50.518	ENSMMUG00000018609	VARS2	98	50.613	Macaca_mulatta
ENSACIG00000004344	vars2	97	50.707	ENSMNEG00000043163	VARS2	98	50.801	Macaca_nemestrina
ENSACIG00000004344	vars2	97	50.330	ENSMLEG00000041728	VARS2	96	50.424	Mandrillus_leucophaeus
ENSACIG00000004344	vars2	96	79.480	ENSMAMG00000020339	vars2	99	77.593	Mastacembelus_armatus
ENSACIG00000004344	vars2	99	85.475	ENSMZEG00005017669	vars2	100	85.475	Maylandia_zebra
ENSACIG00000004344	vars2	94	53.194	ENSMAUG00000018946	Vars2	92	53.194	Mesocricetus_auratus
ENSACIG00000004344	vars2	77	58.566	ENSMICG00000005365	VARS2	92	58.566	Microcebus_murinus
ENSACIG00000004344	vars2	94	48.255	ENSMOCG00000014607	Vars2	92	48.255	Microtus_ochrogaster
ENSACIG00000004344	vars2	96	77.384	ENSMMOG00000012122	vars2	100	75.607	Mola_mola
ENSACIG00000004344	vars2	94	50.986	ENSMODG00000015848	VARS2	96	50.236	Monodelphis_domestica
ENSACIG00000004344	vars2	95	80.697	ENSMALG00000009217	vars2	99	80.697	Monopterus_albus
ENSACIG00000004344	vars2	99	51.458	MGP_CAROLIEiJ_G0021529	Vars2	97	55.360	Mus_caroli
ENSACIG00000004344	vars2	99	51.176	ENSMUSG00000038838	Vars2	96	55.300	Mus_musculus
ENSACIG00000004344	vars2	99	50.988	MGP_PahariEiJ_G0020523	Vars2	96	55.300	Mus_pahari
ENSACIG00000004344	vars2	99	51.364	MGP_SPRETEiJ_G0022436	Vars2	97	55.009	Mus_spretus
ENSACIG00000004344	vars2	95	53.243	ENSMPUG00000011643	VARS2	96	53.243	Mustela_putorius_furo
ENSACIG00000004344	vars2	93	53.213	ENSMLUG00000002356	VARS2	89	53.213	Myotis_lucifugus
ENSACIG00000004344	vars2	93	49.139	ENSNGAG00000020607	Vars2	91	49.139	Nannospalax_galili
ENSACIG00000004344	vars2	67	78.571	ENSNBRG00000001624	vars2	61	78.571	Neolamprologus_brichardi
ENSACIG00000004344	vars2	97	50.095	ENSNLEG00000005625	VARS2	96	50.191	Nomascus_leucogenys
ENSACIG00000004344	vars2	78	56.928	ENSMEUG00000014475	VARS2	87	56.928	Notamacropus_eugenii
ENSACIG00000004344	vars2	89	50.485	ENSOPRG00000000682	VARS2	87	50.485	Ochotona_princeps
ENSACIG00000004344	vars2	99	50.798	ENSODEG00000017965	VARS2	97	50.801	Octodon_degus
ENSACIG00000004344	vars2	95	63.689	ENSONIG00000004734	vars2	100	63.725	Oreochromis_niloticus
ENSACIG00000004344	vars2	70	44.177	ENSOANG00000000398	-	89	44.177	Ornithorhynchus_anatinus
ENSACIG00000004344	vars2	99	47.623	ENSOCUG00000021496	VARS2	63	48.183	Oryctolagus_cuniculus
ENSACIG00000004344	vars2	95	75.617	ENSORLG00000010632	vars2	99	72.861	Oryzias_latipes
ENSACIG00000004344	vars2	95	75.814	ENSORLG00020018584	vars2	99	72.953	Oryzias_latipes_hni
ENSACIG00000004344	vars2	95	75.814	ENSORLG00015010408	vars2	99	72.953	Oryzias_latipes_hsok
ENSACIG00000004344	vars2	99	73.481	ENSOMEG00000008360	vars2	99	73.481	Oryzias_melastigma
ENSACIG00000004344	vars2	95	51.688	ENSOGAG00000006087	VARS2	93	51.688	Otolemur_garnettii
ENSACIG00000004344	vars2	97	51.226	ENSOARG00000010844	VARS2	97	51.176	Ovis_aries
ENSACIG00000004344	vars2	97	50.613	ENSPPAG00000041141	VARS2	98	50.613	Pan_paniscus
ENSACIG00000004344	vars2	99	51.174	ENSPPRG00000006751	VARS2	95	51.174	Panthera_pardus
ENSACIG00000004344	vars2	99	51.130	ENSPTIG00000017799	VARS2	96	52.794	Panthera_tigris_altaica
ENSACIG00000004344	vars2	97	50.613	ENSPTRG00000034497	VARS2	98	50.613	Pan_troglodytes
ENSACIG00000004344	vars2	97	50.613	ENSPANG00000018481	VARS2	97	52.016	Papio_anubis
ENSACIG00000004344	vars2	97	69.246	ENSPKIG00000011372	vars2	97	68.827	Paramormyrops_kingsleyae
ENSACIG00000004344	vars2	59	63.622	ENSPSIG00000006206	VARS2	92	63.354	Pelodiscus_sinensis
ENSACIG00000004344	vars2	99	72.573	ENSPMGG00000000465	vars2	99	72.573	Periophthalmus_magnuspinnatus
ENSACIG00000004344	vars2	94	52.947	ENSPEMG00000014691	Vars2	92	52.947	Peromyscus_maniculatus_bairdii
ENSACIG00000004344	vars2	96	51.245	ENSPCIG00000015040	VARS2	97	50.949	Phascolarctos_cinereus
ENSACIG00000004344	vars2	98	75.190	ENSPFOG00000017616	vars2	97	75.190	Poecilia_formosa
ENSACIG00000004344	vars2	99	74.651	ENSPLAG00000019778	vars2	99	74.651	Poecilia_latipinna
ENSACIG00000004344	vars2	99	74.280	ENSPMEG00000011123	vars2	99	74.280	Poecilia_mexicana
ENSACIG00000004344	vars2	97	67.751	ENSPREG00000014998	vars2	99	67.751	Poecilia_reticulata
ENSACIG00000004344	vars2	99	50.379	ENSPPYG00000016424	VARS2	97	50.473	Pongo_abelii
ENSACIG00000004344	vars2	63	55.426	ENSPCAG00000006946	VARS2	64	55.426	Procavia_capensis
ENSACIG00000004344	vars2	97	51.344	ENSPCOG00000014839	VARS2	93	51.344	Propithecus_coquereli
ENSACIG00000004344	vars2	94	52.448	ENSPVAG00000004197	VARS2	92	52.448	Pteropus_vampyrus
ENSACIG00000004344	vars2	88	88.140	ENSPNYG00000010314	vars2	100	88.140	Pundamilia_nyererei
ENSACIG00000004344	vars2	96	71.802	ENSPNAG00000026793	vars2	97	70.885	Pygocentrus_nattereri
ENSACIG00000004344	vars2	99	50.282	ENSRNOG00000000833	Vars2	98	50.282	Rattus_norvegicus
ENSACIG00000004344	vars2	97	50.707	ENSRBIG00000032725	VARS2	98	50.801	Rhinopithecus_bieti
ENSACIG00000004344	vars2	97	50.707	ENSRROG00000043847	VARS2	98	50.801	Rhinopithecus_roxellana
ENSACIG00000004344	vars2	99	49.629	ENSSBOG00000033240	VARS2	95	49.536	Saimiri_boliviensis_boliviensis
ENSACIG00000004344	vars2	97	50.904	ENSSHAG00000009307	VARS2	97	50.904	Sarcophilus_harrisii
ENSACIG00000004344	vars2	98	68.451	ENSSFOG00015016187	vars2	97	68.057	Scleropages_formosus
ENSACIG00000004344	vars2	100	78.047	ENSSMAG00000020842	vars2	100	79.443	Scophthalmus_maximus
ENSACIG00000004344	vars2	99	81.163	ENSSDUG00000011598	vars2	100	81.810	Seriola_dumerili
ENSACIG00000004344	vars2	99	80.672	ENSSLDG00000015492	vars2	100	81.139	Seriola_lalandi_dorsalis
ENSACIG00000004344	vars2	50	59.259	ENSSARG00000003786	-	60	59.259	Sorex_araneus
ENSACIG00000004344	vars2	79	61.383	ENSSPUG00000014700	VARS2	87	61.383	Sphenodon_punctatus
ENSACIG00000004344	vars2	99	79.081	ENSSPAG00000004654	vars2	99	79.081	Stegastes_partitus
ENSACIG00000004344	vars2	95	52.647	ENSSSCG00000001384	VARS2	95	54.715	Sus_scrofa
ENSACIG00000004344	vars2	95	74.553	ENSTRUG00000005264	vars2	96	73.922	Takifugu_rubripes
ENSACIG00000004344	vars2	97	70.560	ENSTNIG00000005916	vars2	98	69.831	Tetraodon_nigroviridis
ENSACIG00000004344	vars2	82	51.429	ENSTTRG00000012243	VARS2	85	51.429	Tursiops_truncatus
ENSACIG00000004344	vars2	99	51.410	ENSUAMG00000026124	VARS2	99	53.312	Ursus_americanus
ENSACIG00000004344	vars2	99	51.552	ENSUMAG00000019894	VARS2	98	51.552	Ursus_maritimus
ENSACIG00000004344	vars2	99	52.060	ENSVVUG00000010754	VARS2	93	52.060	Vulpes_vulpes
ENSACIG00000004344	vars2	84	55.150	ENSXETG00000003036	vars2	93	55.150	Xenopus_tropicalis
ENSACIG00000004344	vars2	97	77.606	ENSXCOG00000003455	vars2	99	77.606	Xiphophorus_couchianus
ENSACIG00000004344	vars2	99	77.108	ENSXMAG00000013523	vars2	99	77.108	Xiphophorus_maculatus