EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004365 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 10226 bases
Position: chrCCOE01001719.1:546346-556571
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000009316	MMR_HSR1	PF01926.23	7e-06	1	1
ENSACIP00000009404	MMR_HSR1	PF01926.23	7.9e-06	1	1
ENSACIP00000009388	MMR_HSR1	PF01926.23	8.5e-06	1	1
ENSACIP00000009282	MMR_HSR1	PF01926.23	8.5e-06	1	1
ENSACIP00000009219	MMR_HSR1	PF01926.23	8.7e-06	1	1
ENSACIP00000009324	MMR_HSR1	PF01926.23	9.6e-06	1	1
ENSACIP00000009449	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009670	-	1911	-	ENSACIP00000009388	636 (aa)	-	-
ENSACIT00000009603	-	1947	-	ENSACIP00000009324	648 (aa)	-	-
ENSACIT00000009731	-	1878	-	ENSACIP00000009449	625 (aa)	-	-
ENSACIT00000009686	-	1929	-	ENSACIP00000009404	642 (aa)	-	-
ENSACIT00000009595	-	1923	-	ENSACIP00000009316	640 (aa)	-	-
ENSACIT00000009495	-	1953	-	ENSACIP00000009219	650 (aa)	-	-
ENSACIT00000009560	-	1944	-	ENSACIP00000009282	647 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004365	-	77	32.164	ENSACIG00000002828	dnm1l	70	32.432
ENSACIG00000004365	-	99	69.600	ENSACIG00000007486	mxa	99	69.600
ENSACIG00000004365	-	69	35.165	ENSACIG00000010115	-	63	35.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004365	-	97	69.489	ENSAPOG00000009488	-	100	69.489	Acanthochromis_polyacanthus
ENSACIG00000004365	-	63	77.041	ENSATEG00000018869	-	99	77.551	Anabas_testudineus
ENSACIG00000004365	-	100	84.409	ENSACLG00000015278	-	100	84.409	Astatotilapia_calliptera
ENSACIG00000004365	-	98	53.984	ENSCPBG00000012852	-	88	54.032	Chrysemys_picta_bellii
ENSACIG00000004365	-	97	67.314	ENSCSEG00000005684	MX1	100	67.314	Cynoglossus_semilaevis
ENSACIG00000004365	-	97	52.885	ENSGAGG00000009392	-	99	51.893	Gopherus_agassizii
ENSACIG00000004365	-	88	83.423	ENSHBUG00000011119	-	96	83.423	Haplochromis_burtoni
ENSACIG00000004365	-	97	57.532	ENSIPUG00000004815	-	100	57.508	Ictalurus_punctatus
ENSACIG00000004365	-	96	55.878	ENSIPUG00000017098	-	99	55.878	Ictalurus_punctatus
ENSACIG00000004365	-	97	55.343	ENSIPUG00000017075	-	100	55.343	Ictalurus_punctatus
ENSACIG00000004365	-	97	63.636	ENSLOCG00000006389	MX1	100	62.981	Lepisosteus_oculatus
ENSACIG00000004365	-	100	82.835	ENSMZEG00005012472	MX1	98	88.083	Maylandia_zebra
ENSACIG00000004365	-	55	69.500	ENSODEG00000003389	-	98	66.667	Octodon_degus
ENSACIG00000004365	-	99	83.568	ENSONIG00000020363	-	99	83.568	Oreochromis_niloticus
ENSACIG00000004365	-	98	68.362	ENSOMEG00000008446	-	95	75.827	Oryzias_melastigma
ENSACIG00000004365	-	62	75.969	ENSPNYG00000001309	MX1	97	76.031	Pundamilia_nyererei
ENSACIG00000004365	-	86	85.267	ENSPNYG00000001452	-	94	85.267	Pundamilia_nyererei
ENSACIG00000004365	-	97	63.854	ENSPNAG00000027889	-	100	63.651	Pygocentrus_nattereri
ENSACIG00000004365	-	95	61.028	ENSSFOG00015011797	MX1	100	61.028	Scleropages_formosus
ENSACIG00000004365	-	97	66.294	ENSSMAG00000010402	MX1	100	66.613	Scophthalmus_maximus
ENSACIG00000004365	-	99	73.585	ENSSLDG00000014433	-	99	73.659	Seriola_lalandi_dorsalis
ENSACIG00000004365	-	98	72.340	ENSXCOG00000010594	MX1	99	73.621	Xiphophorus_couchianus
ENSACIG00000004365	-	99	73.139	ENSXMAG00000002020	MX1	99	73.139	Xiphophorus_maculatus