EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004408 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5220 bases
Position: chrCCOE01000409.1:368619-373838
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005588	MMR_HSR1	PF01926.23	9.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005759	-	867	-	ENSACIP00000005588	288 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004408	-	97	72.535	ENSACIG00000004426	-	97	72.535
ENSACIG00000004408	-	91	77.186	ENSACIG00000015684	-	93	77.186
ENSACIG00000004408	-	93	56.458	ENSACIG00000000741	-	95	56.458
ENSACIG00000004408	-	91	72.901	ENSACIG00000004521	-	92	72.901
ENSACIG00000004408	-	92	33.962	ENSACIG00000018021	zgc:153654	59	33.962
ENSACIG00000004408	-	92	76.208	ENSACIG00000015616	-	97	76.208
ENSACIG00000004408	-	86	41.200	ENSACIG00000015237	-	92	41.200
ENSACIG00000004408	-	93	34.944	ENSACIG00000009430	-	57	35.659
ENSACIG00000004408	-	94	77.574	ENSACIG00000004444	-	97	77.574
ENSACIG00000004408	-	97	70.107	ENSACIG00000004501	-	97	70.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004408	-	93	60.370	ENSAOCG00000002056	-	90	60.370	Amphiprion_ocellaris
ENSACIG00000004408	-	94	58.672	ENSAPEG00000021053	-	93	60.076	Amphiprion_percula
ENSACIG00000004408	-	94	46.071	ENSATEG00000002718	-	81	47.692	Anabas_testudineus
ENSACIG00000004408	-	92	50.376	ENSATEG00000002869	-	94	50.376	Anabas_testudineus
ENSACIG00000004408	-	89	47.104	ENSACLG00000010292	-	91	47.104	Astatotilapia_calliptera
ENSACIG00000004408	-	90	47.893	ENSACLG00000002020	-	94	47.893	Astatotilapia_calliptera
ENSACIG00000004408	-	85	55.510	ENSACLG00000016390	-	94	55.510	Astatotilapia_calliptera
ENSACIG00000004408	-	92	66.288	ENSACLG00000016487	-	87	66.288	Astatotilapia_calliptera
ENSACIG00000004408	-	91	62.121	ENSACLG00000027615	-	98	62.121	Astatotilapia_calliptera
ENSACIG00000004408	-	93	46.125	ENSACLG00000018321	-	93	46.125	Astatotilapia_calliptera
ENSACIG00000004408	-	93	36.531	ENSAMXG00000037563	-	93	36.531	Astyanax_mexicanus
ENSACIG00000004408	-	91	50.000	ENSCSEG00000018832	-	97	50.000	Cynoglossus_semilaevis
ENSACIG00000004408	-	60	40.678	ENSCVAG00000014640	-	82	40.678	Cyprinodon_variegatus
ENSACIG00000004408	-	88	45.703	ENSCVAG00000007214	-	98	45.703	Cyprinodon_variegatus
ENSACIG00000004408	-	89	45.174	ENSCVAG00000023166	-	97	45.174	Cyprinodon_variegatus
ENSACIG00000004408	-	90	44.061	ENSCVAG00000016719	-	90	44.061	Cyprinodon_variegatus
ENSACIG00000004408	-	86	37.849	ENSDARG00000075791	si:dkey-79f11.5	78	37.849	Danio_rerio
ENSACIG00000004408	-	58	35.714	ENSDARG00000092361	si:dkey-79f11.7	71	35.714	Danio_rerio
ENSACIG00000004408	-	92	36.131	ENSDARG00000092634	CABZ01000634.1	92	36.131	Danio_rerio
ENSACIG00000004408	-	86	40.964	ENSDARG00000107486	CR855320.3	83	40.964	Danio_rerio
ENSACIG00000004408	-	91	36.842	ENSDARG00000093857	si:dkey-79f11.10	82	36.842	Danio_rerio
ENSACIG00000004408	-	71	43.689	ENSDARG00000015678	si:dkeyp-75b4.9	97	43.689	Danio_rerio
ENSACIG00000004408	-	86	40.161	ENSDARG00000095673	si:dkey-79f11.8	76	40.161	Danio_rerio
ENSACIG00000004408	-	82	37.500	ENSDARG00000029720	si:dkeyp-9d4.2	80	37.917	Danio_rerio
ENSACIG00000004408	-	96	34.386	ENSDARG00000010729	CABZ01073795.1	98	34.386	Danio_rerio
ENSACIG00000004408	-	84	38.710	ENSDARG00000095309	si:dkey-79f11.9	87	38.710	Danio_rerio
ENSACIG00000004408	-	73	48.598	ENSFHEG00000019992	-	71	48.598	Fundulus_heteroclitus
ENSACIG00000004408	-	92	45.076	ENSFHEG00000018078	-	95	45.076	Fundulus_heteroclitus
ENSACIG00000004408	-	90	49.430	ENSFHEG00000021105	-	88	49.430	Fundulus_heteroclitus
ENSACIG00000004408	-	90	49.425	ENSFHEG00000018069	-	88	49.425	Fundulus_heteroclitus
ENSACIG00000004408	-	93	44.280	ENSGAFG00000019423	-	59	44.280	Gambusia_affinis
ENSACIG00000004408	-	85	41.532	ENSGAFG00000019422	-	95	41.532	Gambusia_affinis
ENSACIG00000004408	-	91	55.303	ENSGACG00000001319	-	97	55.303	Gasterosteus_aculeatus
ENSACIG00000004408	-	91	55.725	ENSGACG00000012556	-	84	55.725	Gasterosteus_aculeatus
ENSACIG00000004408	-	91	54.924	ENSGACG00000012548	-	89	54.924	Gasterosteus_aculeatus
ENSACIG00000004408	-	85	68.980	ENSHBUG00000010945	-	90	68.980	Haplochromis_burtoni
ENSACIG00000004408	-	90	41.762	ENSIPUG00000006852	-	80	40.927	Ictalurus_punctatus
ENSACIG00000004408	-	57	35.152	ENSIPUG00000006725	-	80	35.152	Ictalurus_punctatus
ENSACIG00000004408	-	89	40.467	ENSIPUG00000007632	-	73	40.467	Ictalurus_punctatus
ENSACIG00000004408	-	90	40.154	ENSIPUG00000005624	-	94	40.154	Ictalurus_punctatus
ENSACIG00000004408	-	89	51.362	ENSKMAG00000000325	-	91	51.362	Kryptolebias_marmoratus
ENSACIG00000004408	-	89	51.163	ENSKMAG00000006729	-	95	51.163	Kryptolebias_marmoratus
ENSACIG00000004408	-	88	51.172	ENSKMAG00000000369	-	93	51.172	Kryptolebias_marmoratus
ENSACIG00000004408	-	94	53.137	ENSMAMG00000003570	-	94	53.137	Mastacembelus_armatus
ENSACIG00000004408	-	92	44.444	ENSMAMG00000003546	-	89	44.444	Mastacembelus_armatus
ENSACIG00000004408	-	91	69.349	ENSMZEG00005008301	-	98	68.441	Maylandia_zebra
ENSACIG00000004408	-	90	47.529	ENSMZEG00005015498	-	92	47.529	Maylandia_zebra
ENSACIG00000004408	-	91	69.202	ENSMZEG00005008329	-	99	69.202	Maylandia_zebra
ENSACIG00000004408	-	85	64.898	ENSNBRG00000020781	-	98	64.898	Neolamprologus_brichardi
ENSACIG00000004408	-	91	67.300	ENSNBRG00000006386	-	98	67.300	Neolamprologus_brichardi
ENSACIG00000004408	-	92	47.388	ENSNBRG00000023290	-	89	47.388	Neolamprologus_brichardi
ENSACIG00000004408	-	92	64.528	ENSNBRG00000020806	-	90	64.528	Neolamprologus_brichardi
ENSACIG00000004408	-	94	57.609	ENSNBRG00000020744	-	94	57.609	Neolamprologus_brichardi
ENSACIG00000004408	-	93	67.164	ENSNBRG00000022075	-	91	68.872	Neolamprologus_brichardi
ENSACIG00000004408	-	91	62.835	ENSNBRG00000006414	-	88	62.835	Neolamprologus_brichardi
ENSACIG00000004408	-	96	45.390	ENSNBRG00000024253	-	94	45.390	Neolamprologus_brichardi
ENSACIG00000004408	-	64	70.492	ENSONIG00000013227	-	100	70.492	Oreochromis_niloticus
ENSACIG00000004408	-	91	69.732	ENSONIG00000012319	-	100	69.732	Oreochromis_niloticus
ENSACIG00000004408	-	86	68.145	ENSONIG00000017465	-	99	68.145	Oreochromis_niloticus
ENSACIG00000004408	-	91	70.115	ENSONIG00000015247	-	92	70.115	Oreochromis_niloticus
ENSACIG00000004408	-	90	69.615	ENSONIG00000015167	-	100	69.615	Oreochromis_niloticus
ENSACIG00000004408	-	84	51.230	ENSONIG00000016843	-	98	51.230	Oreochromis_niloticus
ENSACIG00000004408	-	89	68.482	ENSONIG00000015371	-	99	68.482	Oreochromis_niloticus
ENSACIG00000004408	-	95	39.636	ENSONIG00000018790	-	89	40.613	Oreochromis_niloticus
ENSACIG00000004408	-	85	69.106	ENSONIG00000012317	-	98	69.106	Oreochromis_niloticus
ENSACIG00000004408	-	90	45.560	ENSPMGG00000022341	-	77	45.560	Periophthalmus_magnuspinnatus
ENSACIG00000004408	-	86	49.407	ENSPMGG00000002695	-	95	49.407	Periophthalmus_magnuspinnatus
ENSACIG00000004408	-	93	50.000	ENSPMGG00000012906	-	95	50.000	Periophthalmus_magnuspinnatus
ENSACIG00000004408	-	90	42.857	ENSPMGG00000004994	-	93	42.857	Periophthalmus_magnuspinnatus
ENSACIG00000004408	-	91	46.008	ENSPFOG00000003841	-	89	46.008	Poecilia_formosa
ENSACIG00000004408	-	92	44.030	ENSPFOG00000015493	-	91	43.774	Poecilia_formosa
ENSACIG00000004408	-	89	45.525	ENSPFOG00000015455	-	86	45.525	Poecilia_formosa
ENSACIG00000004408	-	89	47.876	ENSPFOG00000003807	-	90	47.876	Poecilia_formosa
ENSACIG00000004408	-	92	46.840	ENSPFOG00000015382	-	93	46.840	Poecilia_formosa
ENSACIG00000004408	-	90	46.538	ENSPLAG00000018274	-	91	46.538	Poecilia_latipinna
ENSACIG00000004408	-	93	46.667	ENSPMEG00000018635	-	93	46.667	Poecilia_mexicana
ENSACIG00000004408	-	89	45.525	ENSPMEG00000018626	-	90	45.525	Poecilia_mexicana
ENSACIG00000004408	-	93	47.739	ENSPREG00000005137	-	95	47.739	Poecilia_reticulata
ENSACIG00000004408	-	92	45.353	ENSPNYG00000001584	-	93	45.353	Pundamilia_nyererei
ENSACIG00000004408	-	91	67.681	ENSPNYG00000005478	-	89	67.681	Pundamilia_nyererei
ENSACIG00000004408	-	95	65.091	ENSPNYG00000024019	-	91	65.091	Pundamilia_nyererei
ENSACIG00000004408	-	87	34.470	ENSPNAG00000006327	-	65	34.328	Pygocentrus_nattereri
ENSACIG00000004408	-	91	39.544	ENSPNAG00000009266	-	95	39.544	Pygocentrus_nattereri
ENSACIG00000004408	-	89	51.562	ENSSDUG00000002359	-	94	51.562	Seriola_dumerili
ENSACIG00000004408	-	89	50.781	ENSSDUG00000002417	-	94	50.781	Seriola_dumerili
ENSACIG00000004408	-	93	50.746	ENSSLDG00000008952	-	93	50.746	Seriola_lalandi_dorsalis
ENSACIG00000004408	-	90	50.382	ENSSLDG00000016397	-	96	50.382	Seriola_lalandi_dorsalis
ENSACIG00000004408	-	91	59.696	ENSSPAG00000012856	-	93	59.696	Stegastes_partitus
ENSACIG00000004408	-	91	59.316	ENSSPAG00000012915	-	99	59.316	Stegastes_partitus
ENSACIG00000004408	-	60	45.455	ENSXCOG00000003913	-	91	45.455	Xiphophorus_couchianus
ENSACIG00000004408	-	66	45.050	ENSXCOG00000008517	-	62	45.050	Xiphophorus_couchianus
ENSACIG00000004408	-	82	44.304	ENSXCOG00000019639	-	89	44.304	Xiphophorus_couchianus
ENSACIG00000004408	-	90	44.061	ENSXMAG00000009971	-	68	44.061	Xiphophorus_maculatus
ENSACIG00000004408	-	93	47.232	ENSXMAG00000009973	-	92	48.092	Xiphophorus_maculatus
ENSACIG00000004408	-	90	49.049	ENSXMAG00000029117	-	92	49.049	Xiphophorus_maculatus