EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004444 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5680 bases
Position: chrCCOE01000409.1:401505-407184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005658	MMR_HSR1	PF01926.23	1.4e-06	1	1
ENSACIP00000005668	MMR_HSR1	PF01926.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005844	-	873	-	ENSACIP00000005668	290 (aa)	-	-
ENSACIT00000005834	-	825	-	ENSACIP00000005658	274 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004444	-	95	76.923	ENSACIG00000004521	-	93	76.923
ENSACIG00000004444	-	93	33.591	ENSACIG00000018021	zgc:153654	59	33.333
ENSACIG00000004444	-	97	77.574	ENSACIG00000004408	-	94	77.574
ENSACIG00000004444	-	95	79.545	ENSACIG00000015616	-	96	81.226
ENSACIG00000004444	-	91	45.817	ENSACIG00000015237	-	93	45.817
ENSACIG00000004444	-	98	37.132	ENSACIG00000009430	-	60	38.290
ENSACIG00000004444	-	97	74.254	ENSACIG00000004501	-	94	74.254
ENSACIG00000004444	-	94	58.397	ENSACIG00000000741	-	93	58.397
ENSACIG00000004444	-	97	80.000	ENSACIG00000004426	-	89	83.529
ENSACIG00000004444	-	95	78.788	ENSACIG00000015684	-	95	78.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004444	-	97	59.341	ENSAOCG00000002056	-	91	59.341	Amphiprion_ocellaris
ENSACIG00000004444	-	98	58.394	ENSAPEG00000021053	-	96	58.394	Amphiprion_percula
ENSACIG00000004444	-	96	46.296	ENSATEG00000002718	-	81	48.837	Anabas_testudineus
ENSACIG00000004444	-	95	52.672	ENSATEG00000002869	-	94	52.471	Anabas_testudineus
ENSACIG00000004444	-	94	50.000	ENSACLG00000010292	-	94	50.186	Astatotilapia_calliptera
ENSACIG00000004444	-	95	64.906	ENSACLG00000027615	-	99	64.906	Astatotilapia_calliptera
ENSACIG00000004444	-	96	46.008	ENSACLG00000002020	-	96	46.008	Astatotilapia_calliptera
ENSACIG00000004444	-	85	55.745	ENSACLG00000016390	-	92	55.462	Astatotilapia_calliptera
ENSACIG00000004444	-	93	66.409	ENSACLG00000016487	-	87	66.409	Astatotilapia_calliptera
ENSACIG00000004444	-	95	50.186	ENSACLG00000018321	-	94	49.446	Astatotilapia_calliptera
ENSACIG00000004444	-	86	38.333	ENSAMXG00000037563	-	85	38.333	Astyanax_mexicanus
ENSACIG00000004444	-	93	51.923	ENSCSEG00000018832	-	97	51.923	Cynoglossus_semilaevis
ENSACIG00000004444	-	93	44.788	ENSCVAG00000016719	-	90	45.000	Cyprinodon_variegatus
ENSACIG00000004444	-	90	46.063	ENSCVAG00000007214	-	98	46.063	Cyprinodon_variegatus
ENSACIG00000004444	-	92	45.914	ENSCVAG00000023166	-	97	46.693	Cyprinodon_variegatus
ENSACIG00000004444	-	63	40.571	ENSCVAG00000014640	-	82	41.011	Cyprinodon_variegatus
ENSACIG00000004444	-	64	32.571	ENSDARG00000092361	si:dkey-79f11.7	74	32.571	Danio_rerio
ENSACIG00000004444	-	87	39.095	ENSDARG00000095673	si:dkey-79f11.8	74	40.329	Danio_rerio
ENSACIG00000004444	-	83	36.596	ENSDARG00000029720	si:dkeyp-9d4.2	79	37.872	Danio_rerio
ENSACIG00000004444	-	96	36.431	ENSDARG00000092634	CABZ01000634.1	91	36.431	Danio_rerio
ENSACIG00000004444	-	86	39.754	ENSDARG00000095309	si:dkey-79f11.9	87	39.754	Danio_rerio
ENSACIG00000004444	-	87	41.152	ENSDARG00000107486	CR855320.3	82	41.564	Danio_rerio
ENSACIG00000004444	-	96	36.803	ENSDARG00000093857	si:dkey-79f11.10	83	38.346	Danio_rerio
ENSACIG00000004444	-	75	41.429	ENSDARG00000015678	si:dkeyp-75b4.9	99	41.429	Danio_rerio
ENSACIG00000004444	-	88	36.735	ENSDARG00000010729	CABZ01073795.1	85	37.959	Danio_rerio
ENSACIG00000004444	-	87	39.184	ENSDARG00000075791	si:dkey-79f11.5	76	40.249	Danio_rerio
ENSACIG00000004444	-	96	49.627	ENSFHEG00000018069	-	93	51.471	Fundulus_heteroclitus
ENSACIG00000004444	-	77	48.858	ENSFHEG00000019992	-	74	48.858	Fundulus_heteroclitus
ENSACIG00000004444	-	93	45.946	ENSFHEG00000018078	-	96	46.792	Fundulus_heteroclitus
ENSACIG00000004444	-	93	48.276	ENSFHEG00000021105	-	91	48.718	Fundulus_heteroclitus
ENSACIG00000004444	-	97	43.911	ENSGAFG00000019423	-	60	43.911	Gambusia_affinis
ENSACIG00000004444	-	88	40.800	ENSGAFG00000019422	-	95	40.800	Gambusia_affinis
ENSACIG00000004444	-	97	54.275	ENSGACG00000001319	-	99	54.275	Gasterosteus_aculeatus
ENSACIG00000004444	-	96	54.682	ENSGACG00000012556	-	86	54.682	Gasterosteus_aculeatus
ENSACIG00000004444	-	97	53.903	ENSGACG00000012548	-	91	53.903	Gasterosteus_aculeatus
ENSACIG00000004444	-	87	73.950	ENSHBUG00000010945	-	89	73.950	Haplochromis_burtoni
ENSACIG00000004444	-	63	33.333	ENSIPUG00000006725	-	88	33.333	Ictalurus_punctatus
ENSACIG00000004444	-	96	40.824	ENSIPUG00000007632	-	70	44.033	Ictalurus_punctatus
ENSACIG00000004444	-	94	42.366	ENSIPUG00000005624	-	95	42.366	Ictalurus_punctatus
ENSACIG00000004444	-	96	42.804	ENSIPUG00000006852	-	84	42.804	Ictalurus_punctatus
ENSACIG00000004444	-	97	47.426	ENSKMAG00000006729	-	99	47.426	Kryptolebias_marmoratus
ENSACIG00000004444	-	91	51.969	ENSKMAG00000000369	-	99	50.741	Kryptolebias_marmoratus
ENSACIG00000004444	-	91	50.588	ENSKMAG00000000325	-	91	50.588	Kryptolebias_marmoratus
ENSACIG00000004444	-	93	56.031	ENSMAMG00000003570	-	90	56.809	Mastacembelus_armatus
ENSACIG00000004444	-	96	44.815	ENSMAMG00000003546	-	89	44.815	Mastacembelus_armatus
ENSACIG00000004444	-	95	70.229	ENSMZEG00005008301	-	98	70.229	Maylandia_zebra
ENSACIG00000004444	-	96	50.370	ENSMZEG00005015498	-	95	49.632	Maylandia_zebra
ENSACIG00000004444	-	95	71.591	ENSMZEG00005008329	-	100	72.348	Maylandia_zebra
ENSACIG00000004444	-	99	50.362	ENSNBRG00000023290	-	95	49.823	Neolamprologus_brichardi
ENSACIG00000004444	-	97	67.286	ENSNBRG00000020806	-	92	67.286	Neolamprologus_brichardi
ENSACIG00000004444	-	95	65.000	ENSNBRG00000020744	-	90	65.000	Neolamprologus_brichardi
ENSACIG00000004444	-	97	66.418	ENSNBRG00000022075	-	93	66.917	Neolamprologus_brichardi
ENSACIG00000004444	-	93	63.281	ENSNBRG00000006414	-	88	63.281	Neolamprologus_brichardi
ENSACIG00000004444	-	93	51.331	ENSNBRG00000024253	-	89	51.331	Neolamprologus_brichardi
ENSACIG00000004444	-	89	68.699	ENSNBRG00000020781	-	99	68.699	Neolamprologus_brichardi
ENSACIG00000004444	-	95	69.318	ENSNBRG00000006386	-	99	69.318	Neolamprologus_brichardi
ENSACIG00000004444	-	88	71.020	ENSONIG00000012317	-	98	71.837	Oreochromis_niloticus
ENSACIG00000004444	-	93	72.201	ENSONIG00000012319	-	100	72.201	Oreochromis_niloticus
ENSACIG00000004444	-	89	70.040	ENSONIG00000017465	-	100	70.040	Oreochromis_niloticus
ENSACIG00000004444	-	95	70.229	ENSONIG00000015247	-	93	70.229	Oreochromis_niloticus
ENSACIG00000004444	-	93	72.481	ENSONIG00000015167	-	100	73.256	Oreochromis_niloticus
ENSACIG00000004444	-	86	47.083	ENSONIG00000016843	-	97	47.917	Oreochromis_niloticus
ENSACIG00000004444	-	92	67.578	ENSONIG00000015371	-	100	67.578	Oreochromis_niloticus
ENSACIG00000004444	-	93	42.586	ENSONIG00000018790	-	94	42.238	Oreochromis_niloticus
ENSACIG00000004444	-	65	72.376	ENSONIG00000013227	-	100	72.376	Oreochromis_niloticus
ENSACIG00000004444	-	98	48.921	ENSPMGG00000012906	-	99	48.921	Periophthalmus_magnuspinnatus
ENSACIG00000004444	-	95	41.418	ENSPMGG00000004994	-	96	43.165	Periophthalmus_magnuspinnatus
ENSACIG00000004444	-	95	43.561	ENSPMGG00000022341	-	79	43.561	Periophthalmus_magnuspinnatus
ENSACIG00000004444	-	89	46.215	ENSPMGG00000002695	-	95	47.012	Periophthalmus_magnuspinnatus
ENSACIG00000004444	-	95	45.833	ENSPFOG00000015455	-	88	45.833	Poecilia_formosa
ENSACIG00000004444	-	96	46.097	ENSPFOG00000003807	-	94	46.097	Poecilia_formosa
ENSACIG00000004444	-	95	47.368	ENSPFOG00000015382	-	93	47.368	Poecilia_formosa
ENSACIG00000004444	-	96	43.494	ENSPFOG00000015493	-	90	43.893	Poecilia_formosa
ENSACIG00000004444	-	96	44.981	ENSPFOG00000003841	-	92	44.981	Poecilia_formosa
ENSACIG00000004444	-	96	44.195	ENSPLAG00000018274	-	95	44.195	Poecilia_latipinna
ENSACIG00000004444	-	94	46.154	ENSPMEG00000018626	-	95	45.725	Poecilia_mexicana
ENSACIG00000004444	-	95	47.191	ENSPMEG00000018635	-	93	47.191	Poecilia_mexicana
ENSACIG00000004444	-	98	46.977	ENSPREG00000005137	-	96	46.977	Poecilia_reticulata
ENSACIG00000004444	-	99	48.929	ENSPNYG00000001584	-	97	48.929	Pundamilia_nyererei
ENSACIG00000004444	-	91	71.825	ENSPNYG00000005478	-	88	71.825	Pundamilia_nyererei
ENSACIG00000004444	-	93	68.627	ENSPNYG00000024019	-	88	69.141	Pundamilia_nyererei
ENSACIG00000004444	-	93	40.769	ENSPNAG00000009266	-	95	40.769	Pygocentrus_nattereri
ENSACIG00000004444	-	91	33.333	ENSPNAG00000006327	-	67	33.818	Pygocentrus_nattereri
ENSACIG00000004444	-	96	50.566	ENSSDUG00000002417	-	97	50.566	Seriola_dumerili
ENSACIG00000004444	-	96	50.566	ENSSDUG00000002359	-	97	50.566	Seriola_dumerili
ENSACIG00000004444	-	92	49.612	ENSSLDG00000016397	-	95	50.584	Seriola_lalandi_dorsalis
ENSACIG00000004444	-	96	49.813	ENSSLDG00000008952	-	95	50.370	Seriola_lalandi_dorsalis
ENSACIG00000004444	-	97	59.259	ENSSPAG00000012856	-	96	59.259	Stegastes_partitus
ENSACIG00000004444	-	93	59.231	ENSSPAG00000012915	-	98	59.231	Stegastes_partitus
ENSACIG00000004444	-	59	47.904	ENSXCOG00000003913	-	85	47.904	Xiphophorus_couchianus
ENSACIG00000004444	-	65	47.826	ENSXCOG00000008517	-	60	45.641	Xiphophorus_couchianus
ENSACIG00000004444	-	84	42.259	ENSXCOG00000019639	-	91	42.259	Xiphophorus_couchianus
ENSACIG00000004444	-	97	42.963	ENSXMAG00000009971	-	70	44.195	Xiphophorus_maculatus
ENSACIG00000004444	-	95	46.642	ENSXMAG00000009973	-	94	46.792	Xiphophorus_maculatus
ENSACIG00000004444	-	95	49.254	ENSXMAG00000029117	-	95	49.254	Xiphophorus_maculatus