EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000004672 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 6646 bases
Position: chrCCOE01000297.1:168268-174913
Accession: ZDB-GENE-070112-1352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005968	R3H	PF01424.22	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000006148	-	771	-	ENSACIP00000005968	256 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004672	r3hdm4	91	57.143	ENSG00000198858	R3HDM4	90	58.036	Homo_sapiens
ENSACIG00000004672	r3hdm4	91	57.983	ENSAMEG00000003001	R3HDM4	97	57.983	Ailuropoda_melanoleuca
ENSACIG00000004672	r3hdm4	98	86.905	ENSATEG00000015913	r3hdm4	99	86.905	Anabas_testudineus
ENSACIG00000004672	r3hdm4	91	57.143	ENSANAG00000029748	R3HDM4	98	57.143	Aotus_nancymaae
ENSACIG00000004672	r3hdm4	91	57.563	ENSBTAG00000046406	R3HDM4	88	57.563	Bos_taurus
ENSACIG00000004672	r3hdm4	93	55.645	ENSCJAG00000020114	R3HDM4	92	55.645	Callithrix_jacchus
ENSACIG00000004672	r3hdm4	91	57.983	ENSCAFG00000019665	R3HDM4	87	57.983	Canis_familiaris
ENSACIG00000004672	r3hdm4	91	58.403	ENSCAFG00020016880	R3HDM4	87	58.403	Canis_lupus_dingo
ENSACIG00000004672	r3hdm4	91	57.983	ENSCHIG00000020110	R3HDM4	91	57.983	Capra_hircus
ENSACIG00000004672	r3hdm4	91	56.723	ENSCCAG00000019955	R3HDM4	86	56.723	Cebus_capucinus
ENSACIG00000004672	r3hdm4	91	57.083	ENSCATG00000037269	R3HDM4	89	57.083	Cercocebus_atys
ENSACIG00000004672	r3hdm4	91	56.118	ENSCLAG00000007094	R3HDM4	97	56.118	Chinchilla_lanigera
ENSACIG00000004672	r3hdm4	91	57.143	ENSCSAG00000012574	R3HDM4	88	57.143	Chlorocebus_sabaeus
ENSACIG00000004672	r3hdm4	100	61.654	ENSCPBG00000009805	R3HDM4	100	61.654	Chrysemys_picta_bellii
ENSACIG00000004672	r3hdm4	91	57.563	ENSCANG00000040439	R3HDM4	83	57.563	Colobus_angolensis_palliatus
ENSACIG00000004672	r3hdm4	91	56.118	ENSCGRG00001021650	R3hdm4	89	56.118	Cricetulus_griseus_chok1gshd
ENSACIG00000004672	r3hdm4	91	56.118	ENSCGRG00000013169	R3hdm4	89	56.118	Cricetulus_griseus_crigri
ENSACIG00000004672	r3hdm4	100	79.297	ENSCSEG00000018211	r3hdm4	100	79.297	Cynoglossus_semilaevis
ENSACIG00000004672	r3hdm4	100	87.891	ENSCVAG00000017127	r3hdm4	100	87.891	Cyprinodon_variegatus
ENSACIG00000004672	r3hdm4	90	56.067	ENSDORG00000006605	R3hdm4	96	56.067	Dipodomys_ordii
ENSACIG00000004672	r3hdm4	91	56.723	ENSEASG00005021556	R3HDM4	86	56.723	Equus_asinus_asinus
ENSACIG00000004672	r3hdm4	91	56.723	ENSECAG00000000003	R3HDM4	87	56.723	Equus_caballus
ENSACIG00000004672	r3hdm4	91	57.563	ENSFCAG00000042437	R3HDM4	88	57.563	Felis_catus
ENSACIG00000004672	r3hdm4	91	62.553	ENSFALG00000013938	R3HDM4	97	62.553	Ficedula_albicollis
ENSACIG00000004672	r3hdm4	91	56.303	ENSFDAG00000017040	R3HDM4	97	56.303	Fukomys_damarensis
ENSACIG00000004672	r3hdm4	100	87.500	ENSFHEG00000017636	r3hdm4	100	87.500	Fundulus_heteroclitus
ENSACIG00000004672	r3hdm4	95	70.248	ENSGMOG00000001231	r3hdm4	100	70.248	Gadus_morhua
ENSACIG00000004672	r3hdm4	91	62.025	ENSGALG00000001998	R3HDM4	90	62.025	Gallus_gallus
ENSACIG00000004672	r3hdm4	100	86.328	ENSGAFG00000004173	r3hdm4	100	86.328	Gambusia_affinis
ENSACIG00000004672	r3hdm4	100	61.278	ENSGAGG00000019698	R3HDM4	100	61.278	Gopherus_agassizii
ENSACIG00000004672	r3hdm4	91	57.143	ENSGGOG00000008040	R3HDM4	97	57.143	Gorilla_gorilla
ENSACIG00000004672	r3hdm4	100	94.141	ENSHBUG00000014810	r3hdm4	100	94.141	Haplochromis_burtoni
ENSACIG00000004672	r3hdm4	91	54.622	ENSHGLG00000016194	R3HDM4	88	54.622	Heterocephalus_glaber_female
ENSACIG00000004672	r3hdm4	99	82.353	ENSHCOG00000008422	r3hdm4	99	82.353	Hippocampus_comes
ENSACIG00000004672	r3hdm4	100	68.992	ENSIPUG00000006716	r3hdm4	100	68.992	Ictalurus_punctatus
ENSACIG00000004672	r3hdm4	91	55.042	ENSSTOG00000023015	R3HDM4	97	55.042	Ictidomys_tridecemlineatus
ENSACIG00000004672	r3hdm4	90	56.596	ENSJJAG00000012475	R3hdm4	89	56.596	Jaculus_jaculus
ENSACIG00000004672	r3hdm4	100	86.719	ENSKMAG00000005853	r3hdm4	100	86.719	Kryptolebias_marmoratus
ENSACIG00000004672	r3hdm4	100	87.891	ENSLBEG00000000730	r3hdm4	100	87.891	Labrus_bergylta
ENSACIG00000004672	r3hdm4	100	61.832	ENSLACG00000016445	R3HDM4	100	61.832	Latimeria_chalumnae
ENSACIG00000004672	r3hdm4	100	68.199	ENSLOCG00000002423	r3hdm4	100	68.966	Lepisosteus_oculatus
ENSACIG00000004672	r3hdm4	91	57.203	ENSLAFG00000017796	R3HDM4	91	57.203	Loxodonta_africana
ENSACIG00000004672	r3hdm4	91	57.563	ENSMFAG00000044131	R3HDM4	88	57.563	Macaca_fascicularis
ENSACIG00000004672	r3hdm4	86	58.482	ENSMMUG00000009682	R3HDM4	90	58.482	Macaca_mulatta
ENSACIG00000004672	r3hdm4	91	57.563	ENSMNEG00000044115	R3HDM4	96	57.563	Macaca_nemestrina
ENSACIG00000004672	r3hdm4	92	56.790	ENSMLEG00000035693	R3HDM4	89	56.790	Mandrillus_leucophaeus
ENSACIG00000004672	r3hdm4	88	86.607	ENSMAMG00000005652	r3hdm4	92	86.607	Mastacembelus_armatus
ENSACIG00000004672	r3hdm4	91	55.274	ENSMAUG00000010611	R3hdm4	91	55.274	Mesocricetus_auratus
ENSACIG00000004672	r3hdm4	91	57.143	ENSMICG00000010124	R3HDM4	88	57.143	Microcebus_murinus
ENSACIG00000004672	r3hdm4	91	54.894	ENSMOCG00000002646	R3hdm4	89	55.745	Microtus_ochrogaster
ENSACIG00000004672	r3hdm4	100	84.375	ENSMMOG00000008253	r3hdm4	100	84.375	Mola_mola
ENSACIG00000004672	r3hdm4	89	59.565	ENSMODG00000005698	R3HDM4	99	59.565	Monodelphis_domestica
ENSACIG00000004672	r3hdm4	100	84.766	ENSMALG00000018856	r3hdm4	100	84.766	Monopterus_albus
ENSACIG00000004672	r3hdm4	91	54.894	MGP_CAROLIEiJ_G0015551	R3hdm4	89	55.745	Mus_caroli
ENSACIG00000004672	r3hdm4	90	54.741	ENSMUSG00000035781	R3hdm4	89	55.603	Mus_musculus
ENSACIG00000004672	r3hdm4	91	54.468	MGP_PahariEiJ_G0030964	R3hdm4	89	55.319	Mus_pahari
ENSACIG00000004672	r3hdm4	91	54.894	MGP_SPRETEiJ_G0016369	-	75	55.745	Mus_spretus
ENSACIG00000004672	r3hdm4	93	58.678	ENSMPUG00000009394	R3HDM4	90	58.678	Mustela_putorius_furo
ENSACIG00000004672	r3hdm4	100	93.359	ENSNBRG00000004438	r3hdm4	100	93.359	Neolamprologus_brichardi
ENSACIG00000004672	r3hdm4	86	53.913	ENSNLEG00000001022	R3HDM4	99	53.913	Nomascus_leucogenys
ENSACIG00000004672	r3hdm4	91	58.475	ENSMEUG00000011020	R3HDM4	99	58.475	Notamacropus_eugenii
ENSACIG00000004672	r3hdm4	91	56.118	ENSODEG00000011745	R3HDM4	88	56.118	Octodon_degus
ENSACIG00000004672	r3hdm4	100	93.750	ENSONIG00000012675	r3hdm4	92	93.750	Oreochromis_niloticus
ENSACIG00000004672	r3hdm4	100	84.375	ENSOMEG00000003005	r3hdm4	100	84.375	Oryzias_melastigma
ENSACIG00000004672	r3hdm4	91	56.780	ENSOGAG00000025656	R3HDM4	89	56.780	Otolemur_garnettii
ENSACIG00000004672	r3hdm4	91	57.143	ENSOARG00000009945	R3HDM4	97	57.143	Ovis_aries
ENSACIG00000004672	r3hdm4	91	57.143	ENSPPAG00000042371	R3HDM4	97	57.143	Pan_paniscus
ENSACIG00000004672	r3hdm4	91	57.563	ENSPANG00000015203	R3HDM4	88	57.563	Papio_anubis
ENSACIG00000004672	r3hdm4	100	65.649	ENSPKIG00000007421	r3hdm4	100	67.176	Paramormyrops_kingsleyae
ENSACIG00000004672	r3hdm4	100	74.708	ENSPMGG00000020467	r3hdm4	100	74.708	Periophthalmus_magnuspinnatus
ENSACIG00000004672	r3hdm4	91	57.021	ENSPEMG00000008365	Tmem259	97	57.021	Peromyscus_maniculatus_bairdii
ENSACIG00000004672	r3hdm4	100	85.938	ENSPFOG00000003199	r3hdm4	100	85.938	Poecilia_formosa
ENSACIG00000004672	r3hdm4	100	85.938	ENSPMEG00000014183	r3hdm4	100	85.938	Poecilia_mexicana
ENSACIG00000004672	r3hdm4	100	86.328	ENSPREG00000010709	r3hdm4	100	86.328	Poecilia_reticulata
ENSACIG00000004672	r3hdm4	91	57.203	ENSPPYG00000009297	R3HDM4	88	57.203	Pongo_abelii
ENSACIG00000004672	r3hdm4	58	58.278	ENSPCAG00000010997	R3HDM4	55	58.278	Procavia_capensis
ENSACIG00000004672	r3hdm4	91	57.983	ENSPCOG00000016785	R3HDM4	88	57.983	Propithecus_coquereli
ENSACIG00000004672	r3hdm4	100	94.141	ENSPNYG00000017489	r3hdm4	100	94.141	Pundamilia_nyererei
ENSACIG00000004672	r3hdm4	91	54.468	ENSRNOG00000011489	R3hdm4	89	55.319	Rattus_norvegicus
ENSACIG00000004672	r3hdm4	91	57.563	ENSRROG00000028842	R3HDM4	88	57.563	Rhinopithecus_roxellana
ENSACIG00000004672	r3hdm4	91	55.372	ENSSBOG00000019298	R3HDM4	70	55.372	Saimiri_boliviensis_boliviensis
ENSACIG00000004672	r3hdm4	56	62.329	ENSSHAG00000003036	-	100	62.329	Sarcophilus_harrisii
ENSACIG00000004672	r3hdm4	97	72.581	ENSSFOG00015020574	r3hdm4	92	72.510	Scleropages_formosus
ENSACIG00000004672	r3hdm4	100	86.719	ENSSMAG00000021090	r3hdm4	74	86.719	Scophthalmus_maximus
ENSACIG00000004672	r3hdm4	100	92.188	ENSSDUG00000008488	r3hdm4	100	92.188	Seriola_dumerili
ENSACIG00000004672	r3hdm4	100	91.797	ENSSLDG00000025328	r3hdm4	100	91.797	Seriola_lalandi_dorsalis
ENSACIG00000004672	r3hdm4	91	62.869	ENSSPUG00000005434	R3HDM4	92	62.869	Sphenodon_punctatus
ENSACIG00000004672	r3hdm4	99	81.641	ENSSPAG00000002562	r3hdm4	99	81.641	Stegastes_partitus
ENSACIG00000004672	r3hdm4	91	58.403	ENSSSCG00000013419	R3HDM4	87	58.403	Sus_scrofa
ENSACIG00000004672	r3hdm4	78	55.122	ENSTGUG00000000663	R3HDM4	98	56.098	Taeniopygia_guttata
ENSACIG00000004672	r3hdm4	91	58.475	ENSTTRG00000001470	R3HDM4	97	58.475	Tursiops_truncatus
ENSACIG00000004672	r3hdm4	86	58.929	ENSUAMG00000005751	R3HDM4	100	58.929	Ursus_americanus
ENSACIG00000004672	r3hdm4	91	57.983	ENSVVUG00000022685	R3HDM4	87	57.983	Vulpes_vulpes
ENSACIG00000004672	r3hdm4	97	47.082	ENSXETG00000033624	R3HDM4	97	47.082	Xenopus_tropicalis
ENSACIG00000004672	r3hdm4	100	84.436	ENSXCOG00000005127	r3hdm4	100	84.436	Xiphophorus_couchianus
ENSACIG00000004672	r3hdm4	100	85.156	ENSXMAG00000022875	r3hdm4	100	85.156	Xiphophorus_maculatus