EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004928 (Gene tree)
Gene ID: -
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 19580 bases
Position: chrCCOE01000365.1:3501439-3521018
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000006363	PAM2	PF07145.15	5.8e-06	1	1
ENSACIP00000006359	PAM2	PF07145.15	5.9e-06	1	1
ENSACIP00000006363	LsmAD	PF06741.13	1.1e-14	1	1
ENSACIP00000006359	LsmAD	PF06741.13	1.1e-14	1	1
ENSACIP00000006363	SM-ATX	PF14438.6	1.3e-20	1	1
ENSACIP00000006359	SM-ATX	PF14438.6	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000006548	-	3054	-	ENSACIP00000006359	1017 (aa)	-	-
ENSACIT00000006552	-	3024	-	ENSACIP00000006363	1007 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004928	atxn2	58	51.837	ENSACIG00000024435	atxn2l	63	52.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004928	atxn2	100	57.077	ENSG00000204842	ATXN2	90	73.333	Homo_sapiens
ENSACIG00000004928	atxn2	92	96.416	ENSAPOG00000014663	atxn2	94	94.718	Acanthochromis_polyacanthus
ENSACIG00000004928	atxn2	100	56.984	ENSAMEG00000013747	ATXN2	97	56.221	Ailuropoda_melanoleuca
ENSACIG00000004928	atxn2	99	81.139	ENSATEG00000018587	atxn2	99	81.326	Anabas_testudineus
ENSACIG00000004928	atxn2	100	58.786	ENSAPLG00000008724	ATXN2	97	60.000	Anas_platyrhynchos
ENSACIG00000004928	atxn2	100	56.152	ENSANAG00000022522	ATXN2	99	55.352	Aotus_nancymaae
ENSACIG00000004928	atxn2	99	89.279	ENSACLG00000013359	atxn2	96	89.052	Astatotilapia_calliptera
ENSACIG00000004928	atxn2	100	57.757	ENSBTAG00000022069	ATXN2	99	56.250	Bos_taurus
ENSACIG00000004928	atxn2	100	56.069	ENSCJAG00000011756	ATXN2	99	55.345	Callithrix_jacchus
ENSACIG00000004928	atxn2	100	58.644	ENSCAFG00000008606	ATXN2	78	59.807	Canis_familiaris
ENSACIG00000004928	atxn2	100	56.799	ENSCAFG00020017041	ATXN2	99	56.314	Canis_lupus_dingo
ENSACIG00000004928	atxn2	100	57.248	ENSCHIG00000012141	ATXN2	80	56.437	Capra_hircus
ENSACIG00000004928	atxn2	100	56.406	ENSTSYG00000002717	ATXN2	99	55.362	Carlito_syrichta
ENSACIG00000004928	atxn2	81	55.229	ENSCAPG00000013332	ATXN2	97	53.115	Cavia_aperea
ENSACIG00000004928	atxn2	100	57.895	ENSCPOG00000001390	ATXN2	96	55.639	Cavia_porcellus
ENSACIG00000004928	atxn2	100	57.390	ENSCCAG00000026267	ATXN2	99	55.352	Cebus_capucinus
ENSACIG00000004928	atxn2	100	56.285	ENSCATG00000017877	ATXN2	99	55.535	Cercocebus_atys
ENSACIG00000004928	atxn2	100	56.654	ENSCLAG00000009324	ATXN2	96	55.626	Chinchilla_lanigera
ENSACIG00000004928	atxn2	100	56.337	ENSCSAG00000002590	ATXN2	90	56.314	Chlorocebus_sabaeus
ENSACIG00000004928	atxn2	78	63.679	ENSCHOG00000004284	ATXN2	82	63.679	Choloepus_hoffmanni
ENSACIG00000004928	atxn2	100	56.059	ENSCANG00000042302	ATXN2	99	55.037	Colobus_angolensis_palliatus
ENSACIG00000004928	atxn2	100	55.185	ENSCGRG00001022603	Atxn2	81	53.946	Cricetulus_griseus_chok1gshd
ENSACIG00000004928	atxn2	100	57.209	ENSCGRG00000015823	Atxn2	96	57.476	Cricetulus_griseus_crigri
ENSACIG00000004928	atxn2	100	59.320	ENSCSEG00000018366	atxn2	68	72.222	Cynoglossus_semilaevis
ENSACIG00000004928	atxn2	99	77.923	ENSCVAG00000020160	atxn2	94	77.557	Cyprinodon_variegatus
ENSACIG00000004928	atxn2	100	65.840	ENSDARG00000052897	atxn2	93	65.578	Danio_rerio
ENSACIG00000004928	atxn2	100	57.209	ENSDNOG00000015696	ATXN2	99	54.989	Dasypus_novemcinctus
ENSACIG00000004928	atxn2	99	54.461	ENSDORG00000000808	Atxn2	97	55.305	Dipodomys_ordii
ENSACIG00000004928	atxn2	93	57.364	ENSETEG00000005224	ATXN2	74	56.299	Echinops_telfairi
ENSACIG00000004928	atxn2	93	56.110	ENSEASG00005012077	ATXN2	99	55.403	Equus_asinus_asinus
ENSACIG00000004928	atxn2	69	71.127	ENSEEUG00000014635	-	66	71.127	Erinaceus_europaeus
ENSACIG00000004928	atxn2	99	66.418	ENSELUG00000019632	atxn2	94	65.103	Esox_lucius
ENSACIG00000004928	atxn2	100	57.423	ENSFCAG00000003178	ATXN2	99	55.398	Felis_catus
ENSACIG00000004928	atxn2	100	57.621	ENSFALG00000009001	ATXN2	99	58.907	Ficedula_albicollis
ENSACIG00000004928	atxn2	100	56.044	ENSFDAG00000020942	ATXN2	97	56.477	Fukomys_damarensis
ENSACIG00000004928	atxn2	92	76.617	ENSGMOG00000007412	atxn2	91	75.255	Gadus_morhua
ENSACIG00000004928	atxn2	99	55.659	ENSGALG00000004625	ATXN2	99	56.015	Gallus_gallus
ENSACIG00000004928	atxn2	99	79.554	ENSGAFG00000003302	atxn2	93	79.243	Gambusia_affinis
ENSACIG00000004928	atxn2	100	80.712	ENSGACG00000006295	atxn2	98	80.340	Gasterosteus_aculeatus
ENSACIG00000004928	atxn2	100	56.337	ENSGGOG00000002137	ATXN2	99	56.314	Gorilla_gorilla
ENSACIG00000004928	atxn2	100	58.475	ENSHGLG00000009812	ATXN2	81	59.490	Heterocephalus_glaber_female
ENSACIG00000004928	atxn2	100	56.273	ENSHGLG00100019351	ATXN2	97	56.929	Heterocephalus_glaber_male
ENSACIG00000004928	atxn2	100	56.429	ENSSTOG00000000978	ATXN2	96	55.340	Ictidomys_tridecemlineatus
ENSACIG00000004928	atxn2	66	76.828	ENSKMAG00000000980	atxn2	68	76.017	Kryptolebias_marmoratus
ENSACIG00000004928	atxn2	55	77.178	ENSLBEG00000017484	atxn2	95	77.375	Labrus_bergylta
ENSACIG00000004928	atxn2	99	64.451	ENSLOCG00000007880	atxn2	94	63.458	Lepisosteus_oculatus
ENSACIG00000004928	atxn2	100	57.525	ENSLAFG00000007416	ATXN2	97	58.357	Loxodonta_africana
ENSACIG00000004928	atxn2	100	57.209	ENSMFAG00000000374	ATXN2	99	55.261	Macaca_fascicularis
ENSACIG00000004928	atxn2	100	56.470	ENSMMUG00000002226	ATXN2	99	56.449	Macaca_mulatta
ENSACIG00000004928	atxn2	100	57.209	ENSMNEG00000035588	ATXN2	99	55.261	Macaca_nemestrina
ENSACIG00000004928	atxn2	100	56.285	ENSMLEG00000024324	ATXN2	99	55.261	Mandrillus_leucophaeus
ENSACIG00000004928	atxn2	100	58.624	ENSMGAG00000005288	ATXN2	97	60.112	Meleagris_gallopavo
ENSACIG00000004928	atxn2	62	52.802	ENSMAUG00000008223	-	97	50.825	Mesocricetus_auratus
ENSACIG00000004928	atxn2	100	56.522	ENSMICG00000013541	ATXN2	99	56.501	Microcebus_murinus
ENSACIG00000004928	atxn2	86	55.987	ENSMOCG00000005219	Atxn2	96	55.124	Microtus_ochrogaster
ENSACIG00000004928	atxn2	99	78.506	ENSMMOG00000013189	atxn2	99	78.116	Mola_mola
ENSACIG00000004928	atxn2	100	57.749	ENSMODG00000012221	ATXN2	81	57.914	Monodelphis_domestica
ENSACIG00000004928	atxn2	100	55.059	MGP_CAROLIEiJ_G0027692	Atxn2	91	54.797	Mus_caroli
ENSACIG00000004928	atxn2	100	55.853	ENSMUSG00000042605	Atxn2	79	71.698	Mus_musculus
ENSACIG00000004928	atxn2	87	68.687	MGP_PahariEiJ_G0024272	Atxn2	97	49.701	Mus_pahari
ENSACIG00000004928	atxn2	100	55.829	MGP_SPRETEiJ_G0028690	Atxn2	96	56.821	Mus_spretus
ENSACIG00000004928	atxn2	100	54.889	ENSMPUG00000002212	ATXN2	97	54.537	Mustela_putorius_furo
ENSACIG00000004928	atxn2	100	56.667	ENSMLUG00000015559	ATXN2	97	55.847	Myotis_lucifugus
ENSACIG00000004928	atxn2	99	89.494	ENSNBRG00000015794	atxn2	99	89.268	Neolamprologus_brichardi
ENSACIG00000004928	atxn2	100	57.077	ENSNLEG00000000484	ATXN2	99	55.128	Nomascus_leucogenys
ENSACIG00000004928	atxn2	86	77.143	ENSMEUG00000012244	-	83	77.143	Notamacropus_eugenii
ENSACIG00000004928	atxn2	100	53.789	ENSOPRG00000014599	ATXN2	98	53.645	Ochotona_princeps
ENSACIG00000004928	atxn2	100	57.353	ENSODEG00000010798	ATXN2	100	55.934	Octodon_degus
ENSACIG00000004928	atxn2	99	85.967	ENSONIG00000014521	atxn2	95	85.874	Oreochromis_niloticus
ENSACIG00000004928	atxn2	88	54.696	ENSOANG00000004796	ATXN2	99	56.369	Ornithorhynchus_anatinus
ENSACIG00000004928	atxn2	100	57.024	ENSOCUG00000002855	ATXN2	67	55.327	Oryctolagus_cuniculus
ENSACIG00000004928	atxn2	99	79.009	ENSORLG00000003606	atxn2	95	69.811	Oryzias_latipes
ENSACIG00000004928	atxn2	79	88.732	ENSORLG00020000785	atxn2	94	88.732	Oryzias_latipes_hni
ENSACIG00000004928	atxn2	77	88.732	ENSOMEG00000020080	atxn2	94	88.732	Oryzias_melastigma
ENSACIG00000004928	atxn2	100	56.522	ENSOGAG00000000609	ATXN2	80	56.501	Otolemur_garnettii
ENSACIG00000004928	atxn2	100	56.348	ENSOARG00000018223	ATXN2	97	56.437	Ovis_aries
ENSACIG00000004928	atxn2	100	57.011	ENSPPAG00000028043	ATXN2	99	56.250	Pan_paniscus
ENSACIG00000004928	atxn2	100	55.904	ENSPPRG00000003573	ATXN2	99	55.492	Panthera_pardus
ENSACIG00000004928	atxn2	100	56.919	ENSPTIG00000021122	ATXN2	99	56.595	Panthera_tigris_altaica
ENSACIG00000004928	atxn2	100	57.077	ENSPTRG00000029540	ATXN2	99	56.314	Pan_troglodytes
ENSACIG00000004928	atxn2	100	57.209	ENSPANG00000017168	ATXN2	99	55.261	Papio_anubis
ENSACIG00000004928	atxn2	93	82.105	ENSPKIG00000023134	atxn2	94	82.105	Paramormyrops_kingsleyae
ENSACIG00000004928	atxn2	100	58.640	ENSPSIG00000002353	-	97	59.851	Pelodiscus_sinensis
ENSACIG00000004928	atxn2	100	76.352	ENSPMGG00000005074	atxn2	99	75.881	Periophthalmus_magnuspinnatus
ENSACIG00000004928	atxn2	86	55.987	ENSPEMG00000015340	Atxn2	96	55.340	Peromyscus_maniculatus_bairdii
ENSACIG00000004928	atxn2	64	56.061	ENSPMAG00000004603	atxn2	66	56.061	Petromyzon_marinus
ENSACIG00000004928	atxn2	63	52.874	ENSPCIG00000006165	-	99	54.930	Phascolarctos_cinereus
ENSACIG00000004928	atxn2	100	75.294	ENSPFOG00000005857	atxn2	93	76.442	Poecilia_formosa
ENSACIG00000004928	atxn2	100	72.109	ENSPLAG00000015241	atxn2	67	73.305	Poecilia_latipinna
ENSACIG00000004928	atxn2	100	72.400	ENSPMEG00000016681	atxn2	67	74.153	Poecilia_mexicana
ENSACIG00000004928	atxn2	100	80.242	ENSPREG00000014825	atxn2	98	79.736	Poecilia_reticulata
ENSACIG00000004928	atxn2	100	57.077	ENSPPYG00000004963	ATXN2	83	56.127	Pongo_abelii
ENSACIG00000004928	atxn2	99	55.576	ENSPCOG00000022031	ATXN2	99	55.695	Propithecus_coquereli
ENSACIG00000004928	atxn2	92	72.183	ENSPVAG00000013179	ATXN2	74	72.183	Pteropus_vampyrus
ENSACIG00000004928	atxn2	56	82.343	ENSPNYG00000016981	atxn2	98	82.301	Pundamilia_nyererei
ENSACIG00000004928	atxn2	100	56.285	ENSRNOG00000001256	Atxn2	95	57.290	Rattus_norvegicus
ENSACIG00000004928	atxn2	100	55.344	ENSRBIG00000039212	ATXN2	99	55.114	Rhinopithecus_bieti
ENSACIG00000004928	atxn2	100	56.152	ENSRROG00000031170	ATXN2	99	55.128	Rhinopithecus_roxellana
ENSACIG00000004928	atxn2	100	56.159	ENSSBOG00000031563	ATXN2	99	55.444	Saimiri_boliviensis_boliviensis
ENSACIG00000004928	atxn2	100	56.267	ENSSHAG00000007304	ATXN2	97	57.328	Sarcophilus_harrisii
ENSACIG00000004928	atxn2	100	64.755	ENSSFOG00015017229	atxn2	99	62.383	Scleropages_formosus
ENSACIG00000004928	atxn2	92	92.281	ENSSMAG00000004627	atxn2	99	80.801	Scophthalmus_maximus
ENSACIG00000004928	atxn2	93	96.057	ENSSDUG00000001223	atxn2	67	79.473	Seriola_dumerili
ENSACIG00000004928	atxn2	99	79.294	ENSSLDG00000019837	atxn2	99	79.647	Seriola_lalandi_dorsalis
ENSACIG00000004928	atxn2	75	70.588	ENSSARG00000006291	ATXN2	67	70.588	Sorex_araneus
ENSACIG00000004928	atxn2	100	57.626	ENSSPUG00000010317	ATXN2	90	58.627	Sphenodon_punctatus
ENSACIG00000004928	atxn2	92	96.416	ENSSPAG00000000377	atxn2	96	85.345	Stegastes_partitus
ENSACIG00000004928	atxn2	100	57.182	ENSSSCG00000009834	ATXN2	91	56.367	Sus_scrofa
ENSACIG00000004928	atxn2	99	77.633	ENSTRUG00000016801	atxn2	99	76.529	Takifugu_rubripes
ENSACIG00000004928	atxn2	87	72.477	ENSTBEG00000001985	ATXN2	83	72.477	Tupaia_belangeri
ENSACIG00000004928	atxn2	87	63.658	ENSTTRG00000000952	ATXN2	69	63.636	Tursiops_truncatus
ENSACIG00000004928	atxn2	100	55.874	ENSUAMG00000025295	ATXN2	91	56.034	Ursus_americanus
ENSACIG00000004928	atxn2	100	56.799	ENSUMAG00000007315	ATXN2	99	56.034	Ursus_maritimus
ENSACIG00000004928	atxn2	92	63.846	ENSVPAG00000005940	ATXN2	90	58.333	Vicugna_pacos
ENSACIG00000004928	atxn2	100	56.984	ENSVVUG00000016107	ATXN2	99	56.501	Vulpes_vulpes
ENSACIG00000004928	atxn2	99	54.871	ENSXETG00000020912	atxn2	98	55.432	Xenopus_tropicalis
ENSACIG00000004928	atxn2	55	74.669	ENSXCOG00000010001	atxn2	98	74.324	Xiphophorus_couchianus
ENSACIG00000004928	atxn2	100	71.277	ENSXMAG00000003481	atxn2	67	72.423	Xiphophorus_maculatus