EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000005193 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8164 bases
Position: chrCCOE01000954.1:54031-62194
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000006606	zf-C2H2	PF00096.26	2.7e-12	1	2
ENSACIP00000006606	zf-C2H2	PF00096.26	2.7e-12	2	2
ENSACIP00000006606	zf-met	PF12874.7	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000006805	-	1140	-	ENSACIP00000006606	379 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000005193	-	69	42.105	ENSACIG00000000406	prdm5	93	42.105
ENSACIG00000005193	-	67	37.193	ENSACIG00000022698	prdm14	53	37.193
ENSACIG00000005193	-	100	80.977	ENSACIG00000019578	prdm12b	100	79.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005193	-	91	80.580	ENSG00000130711	PRDM12	99	75.515	Homo_sapiens
ENSACIG00000005193	-	100	72.135	ENSAPOG00000018234	-	100	72.135	Acanthochromis_polyacanthus
ENSACIG00000005193	-	100	79.241	ENSAPOG00000016051	prdm12b	100	78.987	Acanthochromis_polyacanthus
ENSACIG00000005193	-	91	78.261	ENSAMEG00000016234	PRDM12	99	78.551	Ailuropoda_melanoleuca
ENSACIG00000005193	-	100	79.795	ENSAOCG00000015040	prdm12b	100	79.540	Amphiprion_ocellaris
ENSACIG00000005193	-	100	81.980	ENSAPEG00000022849	-	99	81.360	Amphiprion_percula
ENSACIG00000005193	-	100	80.155	ENSAPEG00000015092	prdm12b	100	80.155	Amphiprion_percula
ENSACIG00000005193	-	100	88.161	ENSATEG00000014595	-	100	88.161	Anabas_testudineus
ENSACIG00000005193	-	96	77.961	ENSANAG00000020616	PRDM12	99	77.961	Aotus_nancymaae
ENSACIG00000005193	-	100	77.344	ENSACLG00000011876	prdm12b	100	76.823	Astatotilapia_calliptera
ENSACIG00000005193	-	100	88.442	ENSACLG00000007631	-	100	89.196	Astatotilapia_calliptera
ENSACIG00000005193	-	100	76.650	ENSAMXG00000033665	prdm12b	100	79.793	Astyanax_mexicanus
ENSACIG00000005193	-	100	76.963	ENSAMXG00000008540	PRDM12	100	76.808	Astyanax_mexicanus
ENSACIG00000005193	-	91	80.290	ENSBTAG00000023797	PRDM12	99	75.907	Bos_taurus
ENSACIG00000005193	-	91	80.580	ENSCJAG00000020540	PRDM12	99	75.648	Callithrix_jacchus
ENSACIG00000005193	-	79	82.060	ENSCAFG00000023076	PRDM12	98	78.704	Canis_familiaris
ENSACIG00000005193	-	91	80.290	ENSCAFG00020024046	PRDM12	99	75.648	Canis_lupus_dingo
ENSACIG00000005193	-	91	80.290	ENSCHIG00000025005	PRDM12	99	75.648	Capra_hircus
ENSACIG00000005193	-	88	78.743	ENSCPOG00000005901	PRDM12	95	79.042	Cavia_porcellus
ENSACIG00000005193	-	91	80.580	ENSCCAG00000037485	PRDM12	99	75.907	Cebus_capucinus
ENSACIG00000005193	-	91	80.580	ENSCATG00000020327	PRDM12	99	75.907	Cercocebus_atys
ENSACIG00000005193	-	93	77.904	ENSCLAG00000005499	PRDM12	91	78.187	Chinchilla_lanigera
ENSACIG00000005193	-	91	80.580	ENSCSAG00000014756	PRDM12	99	75.907	Chlorocebus_sabaeus
ENSACIG00000005193	-	100	78.364	ENSCPBG00000022628	PRDM12	99	78.364	Chrysemys_picta_bellii
ENSACIG00000005193	-	91	80.290	ENSCGRG00001015005	Prdm12	99	75.711	Cricetulus_griseus_chok1gshd
ENSACIG00000005193	-	100	84.673	ENSCVAG00000000944	-	100	84.422	Cyprinodon_variegatus
ENSACIG00000005193	-	100	78.385	ENSCVAG00000017166	prdm12b	100	79.167	Cyprinodon_variegatus
ENSACIG00000005193	-	100	81.347	ENSDARG00000007430	prdm12b	100	80.570	Danio_rerio
ENSACIG00000005193	-	91	79.769	ENSDNOG00000042302	PRDM12	99	75.844	Dasypus_novemcinctus
ENSACIG00000005193	-	87	63.897	ENSEBUG00000016780	prdm12b	74	65.043	Eptatretus_burgeri
ENSACIG00000005193	-	96	77.961	ENSEASG00005008472	PRDM12	99	75.648	Equus_asinus_asinus
ENSACIG00000005193	-	96	77.961	ENSECAG00000005933	PRDM12	99	75.648	Equus_caballus
ENSACIG00000005193	-	100	74.807	ENSELUG00000013674	PRDM12	100	75.835	Esox_lucius
ENSACIG00000005193	-	100	80.670	ENSELUG00000009905	prdm12b	100	80.155	Esox_lucius
ENSACIG00000005193	-	91	80.290	ENSFCAG00000043086	PRDM12	99	75.648	Felis_catus
ENSACIG00000005193	-	100	78.892	ENSFALG00000001445	PRDM12	89	78.892	Ficedula_albicollis
ENSACIG00000005193	-	100	77.865	ENSFHEG00000003944	prdm12b	100	78.497	Fundulus_heteroclitus
ENSACIG00000005193	-	100	85.101	ENSFHEG00000007746	-	100	83.459	Fundulus_heteroclitus
ENSACIG00000005193	-	100	77.121	ENSGMOG00000011797	prdm12b	100	77.635	Gadus_morhua
ENSACIG00000005193	-	100	78.892	ENSGALG00000003895	PRDM12	99	78.892	Gallus_gallus
ENSACIG00000005193	-	100	77.692	ENSGAFG00000010827	prdm12b	99	77.949	Gambusia_affinis
ENSACIG00000005193	-	100	79.070	ENSGACG00000016713	prdm12b	99	78.811	Gasterosteus_aculeatus
ENSACIG00000005193	-	100	78.364	ENSGAGG00000014083	PRDM12	99	78.364	Gopherus_agassizii
ENSACIG00000005193	-	91	80.290	ENSGGOG00000010568	PRDM12	99	75.452	Gorilla_gorilla
ENSACIG00000005193	-	100	88.442	ENSHBUG00000022537	-	93	89.196	Haplochromis_burtoni
ENSACIG00000005193	-	100	79.897	ENSHBUG00000022878	prdm12b	100	79.434	Haplochromis_burtoni
ENSACIG00000005193	-	93	78.754	ENSHGLG00000013939	PRDM12	99	74.611	Heterocephalus_glaber_female
ENSACIG00000005193	-	100	74.740	ENSHCOG00000021167	-	100	74.219	Hippocampus_comes
ENSACIG00000005193	-	91	80.226	ENSHCOG00000003663	prdm12b	100	72.593	Hippocampus_comes
ENSACIG00000005193	-	100	78.571	ENSIPUG00000017053	prdm12b	100	79.688	Ictalurus_punctatus
ENSACIG00000005193	-	100	74.346	ENSIPUG00000019544	PRDM12	100	74.346	Ictalurus_punctatus
ENSACIG00000005193	-	97	76.839	ENSSTOG00000005986	PRDM12	90	76.839	Ictidomys_tridecemlineatus
ENSACIG00000005193	-	91	80.000	ENSJJAG00000005424	Prdm12	98	80.290	Jaculus_jaculus
ENSACIG00000005193	-	100	71.463	ENSKMAG00000016921	prdm12b	100	72.662	Kryptolebias_marmoratus
ENSACIG00000005193	-	94	86.555	ENSKMAG00000021205	-	96	84.741	Kryptolebias_marmoratus
ENSACIG00000005193	-	100	79.028	ENSLBEG00000017769	prdm12b	100	79.028	Labrus_bergylta
ENSACIG00000005193	-	100	88.778	ENSLBEG00000007776	-	100	90.025	Labrus_bergylta
ENSACIG00000005193	-	100	78.100	ENSLACG00000017560	PRDM12	99	78.628	Latimeria_chalumnae
ENSACIG00000005193	-	100	80.157	ENSLOCG00000005429	prdm12b	100	78.788	Lepisosteus_oculatus
ENSACIG00000005193	-	91	78.571	ENSLAFG00000006979	PRDM12	95	75.066	Loxodonta_africana
ENSACIG00000005193	-	91	80.580	ENSMFAG00000040322	PRDM12	99	75.000	Macaca_fascicularis
ENSACIG00000005193	-	91	80.580	ENSMNEG00000037234	PRDM12	99	75.907	Macaca_nemestrina
ENSACIG00000005193	-	100	84.925	ENSMAMG00000018988	-	100	86.466	Mastacembelus_armatus
ENSACIG00000005193	-	100	79.897	ENSMAMG00000013212	prdm12b	100	79.284	Mastacembelus_armatus
ENSACIG00000005193	-	100	88.000	ENSMZEG00005000415	PRDM12	100	88.750	Maylandia_zebra
ENSACIG00000005193	-	98	78.820	ENSMGAG00000005438	PRDM12	98	78.820	Meleagris_gallopavo
ENSACIG00000005193	-	100	74.615	ENSMAUG00000013040	Prdm12	99	75.130	Mesocricetus_auratus
ENSACIG00000005193	-	96	77.686	ENSMICG00000015480	PRDM12	99	75.457	Microcebus_murinus
ENSACIG00000005193	-	99	76.533	ENSMOCG00000021026	Prdm12	93	78.142	Microtus_ochrogaster
ENSACIG00000005193	-	100	77.368	ENSMODG00000012108	PRDM12	99	77.105	Monodelphis_domestica
ENSACIG00000005193	-	83	79.193	ENSMALG00000021901	prdm12b	98	79.193	Monopterus_albus
ENSACIG00000005193	-	91	80.290	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.907	Mus_caroli
ENSACIG00000005193	-	91	80.290	ENSMUSG00000079466	Prdm12	99	75.907	Mus_musculus
ENSACIG00000005193	-	91	80.290	MGP_PahariEiJ_G0024871	Prdm12	99	75.907	Mus_pahari
ENSACIG00000005193	-	91	80.290	MGP_SPRETEiJ_G0024331	Prdm12	99	75.907	Mus_spretus
ENSACIG00000005193	-	91	80.290	ENSNGAG00000018480	Prdm12	99	75.989	Nannospalax_galili
ENSACIG00000005193	-	100	79.434	ENSNBRG00000006727	prdm12b	100	78.827	Neolamprologus_brichardi
ENSACIG00000005193	-	100	84.169	ENSNBRG00000024312	-	100	83.641	Neolamprologus_brichardi
ENSACIG00000005193	-	100	69.474	ENSMEUG00000003828	PRDM12	99	69.211	Notamacropus_eugenii
ENSACIG00000005193	-	91	80.000	ENSOPRG00000008680	PRDM12	98	80.000	Ochotona_princeps
ENSACIG00000005193	-	97	77.049	ENSODEG00000016282	PRDM12	64	77.322	Octodon_degus
ENSACIG00000005193	-	61	79.565	ENSOANG00000001043	PRDM12	100	79.565	Ornithorhynchus_anatinus
ENSACIG00000005193	-	87	79.027	ENSOCUG00000008241	PRDM12	99	79.027	Oryctolagus_cuniculus
ENSACIG00000005193	-	100	78.261	ENSORLG00000007114	prdm12b	99	78.005	Oryzias_latipes
ENSACIG00000005193	-	100	87.218	ENSORLG00000017558	-	100	86.717	Oryzias_latipes
ENSACIG00000005193	-	100	87.000	ENSORLG00020013167	-	100	86.750	Oryzias_latipes_hni
ENSACIG00000005193	-	100	78.061	ENSORLG00020019565	prdm12b	99	78.061	Oryzias_latipes_hni
ENSACIG00000005193	-	100	86.967	ENSORLG00015003435	-	100	86.466	Oryzias_latipes_hsok
ENSACIG00000005193	-	100	77.892	ENSORLG00015007621	prdm12b	99	77.749	Oryzias_latipes_hsok
ENSACIG00000005193	-	100	76.650	ENSOMEG00000004134	prdm12b	99	77.215	Oryzias_melastigma
ENSACIG00000005193	-	100	88.802	ENSOMEG00000007762	-	100	88.802	Oryzias_melastigma
ENSACIG00000005193	-	91	80.290	ENSOGAG00000007557	PRDM12	97	80.290	Otolemur_garnettii
ENSACIG00000005193	-	81	77.922	ENSPPAG00000031506	-	97	77.922	Pan_paniscus
ENSACIG00000005193	-	100	69.531	ENSPPRG00000023024	PRDM12	92	69.152	Panthera_pardus
ENSACIG00000005193	-	91	80.580	ENSPTRG00000043324	-	99	75.711	Pan_troglodytes
ENSACIG00000005193	-	91	80.580	ENSPTRG00000021475	PRDM12	99	75.711	Pan_troglodytes
ENSACIG00000005193	-	91	80.580	ENSPANG00000025967	PRDM12	99	75.907	Papio_anubis
ENSACIG00000005193	-	100	81.818	ENSPKIG00000007228	prdm12b	100	81.443	Paramormyrops_kingsleyae
ENSACIG00000005193	-	94	75.207	ENSPKIG00000004305	PRDM12	94	76.812	Paramormyrops_kingsleyae
ENSACIG00000005193	-	100	78.364	ENSPSIG00000006739	PRDM12	99	78.100	Pelodiscus_sinensis
ENSACIG00000005193	-	100	78.385	ENSPMGG00000008867	prdm12b	99	78.182	Periophthalmus_magnuspinnatus
ENSACIG00000005193	-	100	78.803	ENSPMGG00000002356	-	100	78.186	Periophthalmus_magnuspinnatus
ENSACIG00000005193	-	97	76.408	ENSPEMG00000009969	Prdm12	96	76.676	Peromyscus_maniculatus_bairdii
ENSACIG00000005193	-	100	77.632	ENSPCIG00000024119	PRDM12	99	77.368	Phascolarctos_cinereus
ENSACIG00000005193	-	100	78.796	ENSPFOG00000019841	prdm12b	100	78.796	Poecilia_formosa
ENSACIG00000005193	-	100	76.590	ENSPLAG00000016626	prdm12b	99	76.590	Poecilia_latipinna
ENSACIG00000005193	-	97	77.105	ENSPMEG00000016698	prdm12b	99	77.368	Poecilia_mexicana
ENSACIG00000005193	-	100	76.650	ENSPREG00000015073	prdm12b	99	76.396	Poecilia_reticulata
ENSACIG00000005193	-	95	82.173	ENSPREG00000003211	-	94	80.501	Poecilia_reticulata
ENSACIG00000005193	-	97	77.174	ENSPPYG00000019694	PRDM12	96	77.174	Pongo_abelii
ENSACIG00000005193	-	91	80.290	ENSPCOG00000022255	PRDM12	99	75.452	Propithecus_coquereli
ENSACIG00000005193	-	91	80.290	ENSPVAG00000001511	PRDM12	99	75.452	Pteropus_vampyrus
ENSACIG00000005193	-	100	79.487	ENSPNYG00000009607	prdm12b	100	79.028	Pundamilia_nyererei
ENSACIG00000005193	-	100	88.000	ENSPNYG00000013589	-	100	88.750	Pundamilia_nyererei
ENSACIG00000005193	-	100	77.806	ENSPNAG00000024532	prdm12b	100	80.208	Pygocentrus_nattereri
ENSACIG00000005193	-	100	73.969	ENSPNAG00000013396	PRDM12	100	75.515	Pygocentrus_nattereri
ENSACIG00000005193	-	91	80.290	ENSRNOG00000009218	Prdm12	99	75.907	Rattus_norvegicus
ENSACIG00000005193	-	89	80.178	ENSRBIG00000042712	PRDM12	98	74.151	Rhinopithecus_bieti
ENSACIG00000005193	-	90	80.409	ENSRROG00000043554	PRDM12	99	80.409	Rhinopithecus_roxellana
ENSACIG00000005193	-	100	77.428	ENSSHAG00000015972	PRDM12	99	76.903	Sarcophilus_harrisii
ENSACIG00000005193	-	100	75.250	ENSSMAG00000003754	prdm12b	100	76.309	Scophthalmus_maximus
ENSACIG00000005193	-	100	77.387	ENSSDUG00000023498	prdm12b	100	77.193	Seriola_dumerili
ENSACIG00000005193	-	100	85.570	ENSSDUG00000019071	-	100	86.869	Seriola_dumerili
ENSACIG00000005193	-	100	78.228	ENSSLDG00000009557	prdm12b	100	77.778	Seriola_lalandi_dorsalis
ENSACIG00000005193	-	100	83.905	ENSSLDG00000013562	-	100	83.905	Seriola_lalandi_dorsalis
ENSACIG00000005193	-	100	78.851	ENSSPUG00000013424	PRDM12	99	78.329	Sphenodon_punctatus
ENSACIG00000005193	-	100	78.827	ENSSPAG00000018824	prdm12b	100	78.316	Stegastes_partitus
ENSACIG00000005193	-	100	76.190	ENSSPAG00000022420	-	100	76.368	Stegastes_partitus
ENSACIG00000005193	-	91	80.290	ENSSSCG00000005703	PRDM12	99	75.648	Sus_scrofa
ENSACIG00000005193	-	100	78.906	ENSTRUG00000018659	prdm12b	100	78.497	Takifugu_rubripes
ENSACIG00000005193	-	100	84.960	ENSTRUG00000013239	-	100	84.960	Takifugu_rubripes
ENSACIG00000005193	-	100	79.737	ENSTNIG00000005859	-	99	79.737	Tetraodon_nigroviridis
ENSACIG00000005193	-	100	77.604	ENSTNIG00000009020	prdm12b	99	77.604	Tetraodon_nigroviridis
ENSACIG00000005193	-	91	80.290	ENSUAMG00000009653	PRDM12	96	77.027	Ursus_americanus
ENSACIG00000005193	-	91	80.290	ENSVVUG00000027662	PRDM12	77	80.290	Vulpes_vulpes
ENSACIG00000005193	-	100	78.093	ENSXCOG00000002836	prdm12b	99	78.608	Xiphophorus_couchianus
ENSACIG00000005193	-	100	78.093	ENSXMAG00000005537	prdm12b	100	78.608	Xiphophorus_maculatus
ENSACIG00000005193	-	100	84.864	ENSXMAG00000028012	-	100	83.744	Xiphophorus_maculatus