EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000005478 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 74342 bases
Position: chrCCOE01001511.1:177851-252192
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000006989	Fox-1_C	PF12414.8	5.4e-29	1	1
ENSACIP00000006989	RRM_1	PF00076.22	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007200	-	1191	-	ENSACIP00000006989	396 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000005478	rbfox1	68	61.993	ENSACIG00000010817	rbfox3b	76	62.132
ENSACIG00000005478	rbfox1	56	50.847	ENSACIG00000001690	rbfox2	79	51.867
ENSACIG00000005478	rbfox1	50	59.535	ENSACIG00000022922	-	89	59.070
ENSACIG00000005478	rbfox1	66	54.924	ENSACIG00000006441	rbfox1l	61	54.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005478	rbfox1	68	71.375	ENSG00000078328	RBFOX1	65	71.375	Homo_sapiens
ENSACIG00000005478	rbfox1	68	76.208	ENSAPOG00000003197	rbfox1	68	71.478	Acanthochromis_polyacanthus
ENSACIG00000005478	rbfox1	71	64.413	ENSAPEG00000010636	rbfox1	72	65.836	Amphiprion_percula
ENSACIG00000005478	rbfox1	52	83.824	ENSATEG00000007513	rbfox1	69	83.744	Anabas_testudineus
ENSACIG00000005478	rbfox1	68	64.527	ENSAPLG00000013263	RBFOX1	67	64.527	Anas_platyrhynchos
ENSACIG00000005478	rbfox1	78	57.522	ENSACAG00000004013	RBFOX1	68	61.204	Anolis_carolinensis
ENSACIG00000005478	rbfox1	68	71.747	ENSANAG00000029527	RBFOX1	64	71.747	Aotus_nancymaae
ENSACIG00000005478	rbfox1	68	62.752	ENSBTAG00000007210	RBFOX1	55	75.481	Bos_taurus
ENSACIG00000005478	rbfox1	68	69.630	ENSCJAG00000017351	RBFOX1	62	69.630	Callithrix_jacchus
ENSACIG00000005478	rbfox1	68	62.963	ENSCAFG00000019082	RBFOX1	52	75.481	Canis_familiaris
ENSACIG00000005478	rbfox1	68	62.987	ENSCHIG00000023549	RBFOX1	71	63.023	Capra_hircus
ENSACIG00000005478	rbfox1	68	71.375	ENSTSYG00000005334	RBFOX1	66	71.375	Carlito_syrichta
ENSACIG00000005478	rbfox1	68	65.320	ENSCAPG00000017669	RBFOX1	69	64.865	Cavia_aperea
ENSACIG00000005478	rbfox1	68	65.320	ENSCPOG00000011314	RBFOX1	68	64.865	Cavia_porcellus
ENSACIG00000005478	rbfox1	68	71.747	ENSCCAG00000023031	RBFOX1	64	71.747	Cebus_capucinus
ENSACIG00000005478	rbfox1	68	71.375	ENSCATG00000033816	RBFOX1	64	71.375	Cercocebus_atys
ENSACIG00000005478	rbfox1	68	64.983	ENSCLAG00000012761	RBFOX1	67	64.527	Chinchilla_lanigera
ENSACIG00000005478	rbfox1	56	68.273	ENSCSAG00000008739	RBFOX1	59	68.273	Chlorocebus_sabaeus
ENSACIG00000005478	rbfox1	68	71.747	ENSCPBG00000026626	RBFOX1	61	75.000	Chrysemys_picta_bellii
ENSACIG00000005478	rbfox1	68	71.375	ENSCANG00000033125	RBFOX1	64	71.375	Colobus_angolensis_palliatus
ENSACIG00000005478	rbfox1	68	64.983	ENSCGRG00001013729	Rbfox1	67	64.527	Cricetulus_griseus_chok1gshd
ENSACIG00000005478	rbfox1	68	64.983	ENSCGRG00000003272	Rbfox1	67	64.527	Cricetulus_griseus_crigri
ENSACIG00000005478	rbfox1	74	68.000	ENSCSEG00000008840	rbfox1	69	70.175	Cynoglossus_semilaevis
ENSACIG00000005478	rbfox1	68	70.741	ENSDARG00000014746	rbfox1	73	81.218	Danio_rerio
ENSACIG00000005478	rbfox1	68	64.983	ENSDNOG00000043612	RBFOX1	64	64.983	Dasypus_novemcinctus
ENSACIG00000005478	rbfox1	76	60.909	ENSDORG00000010024	Rbfox1	69	64.189	Dipodomys_ordii
ENSACIG00000005478	rbfox1	56	60.887	ENSETEG00000003771	RBFOX1	53	60.887	Echinops_telfairi
ENSACIG00000005478	rbfox1	68	64.865	ENSEASG00005011599	RBFOX1	67	62.626	Equus_asinus_asinus
ENSACIG00000005478	rbfox1	68	64.865	ENSECAG00000012667	RBFOX1	63	64.865	Equus_caballus
ENSACIG00000005478	rbfox1	68	71.747	ENSFCAG00000025322	RBFOX1	59	71.747	Felis_catus
ENSACIG00000005478	rbfox1	56	68.273	ENSFALG00000004027	RBFOX1	66	68.273	Ficedula_albicollis
ENSACIG00000005478	rbfox1	68	64.983	ENSFDAG00000007388	RBFOX1	67	64.527	Fukomys_damarensis
ENSACIG00000005478	rbfox1	56	76.577	ENSGALG00000034325	RBFOX1	50	76.577	Gallus_gallus
ENSACIG00000005478	rbfox1	68	69.259	ENSGAGG00000023681	RBFOX1	71	64.865	Gopherus_agassizii
ENSACIG00000005478	rbfox1	68	71.375	ENSGGOG00000016871	-	64	71.375	Gorilla_gorilla
ENSACIG00000005478	rbfox1	68	64.983	ENSHGLG00000016944	RBFOX1	67	64.527	Heterocephalus_glaber_female
ENSACIG00000005478	rbfox1	68	64.983	ENSHGLG00100003272	RBFOX1	67	64.527	Heterocephalus_glaber_male
ENSACIG00000005478	rbfox1	79	65.421	ENSHCOG00000016419	rbfox1	81	66.038	Hippocampus_comes
ENSACIG00000005478	rbfox1	63	75.000	ENSIPUG00000015215	rbfox1	69	73.234	Ictalurus_punctatus
ENSACIG00000005478	rbfox1	68	64.865	ENSSTOG00000000322	RBFOX1	68	64.865	Ictidomys_tridecemlineatus
ENSACIG00000005478	rbfox1	68	65.657	ENSJJAG00000002575	Rbfox1	69	65.203	Jaculus_jaculus
ENSACIG00000005478	rbfox1	68	75.465	ENSLBEG00000014659	rbfox1	67	75.185	Labrus_bergylta
ENSACIG00000005478	rbfox1	73	61.371	ENSLOCG00000006675	rbfox1	73	61.371	Lepisosteus_oculatus
ENSACIG00000005478	rbfox1	68	65.101	ENSLAFG00000011480	RBFOX1	87	64.646	Loxodonta_africana
ENSACIG00000005478	rbfox1	68	71.375	ENSMFAG00000036447	RBFOX1	64	71.375	Macaca_fascicularis
ENSACIG00000005478	rbfox1	68	71.375	ENSMMUG00000003458	RBFOX1	64	71.375	Macaca_mulatta
ENSACIG00000005478	rbfox1	56	77.027	ENSMNEG00000032034	RBFOX1	66	64.527	Macaca_nemestrina
ENSACIG00000005478	rbfox1	68	71.375	ENSMLEG00000015382	RBFOX1	64	71.375	Mandrillus_leucophaeus
ENSACIG00000005478	rbfox1	68	75.465	ENSMAMG00000003142	rbfox1	70	82.759	Mastacembelus_armatus
ENSACIG00000005478	rbfox1	55	40.506	ENSMAUG00000020570	Rbfox1	60	39.834	Mesocricetus_auratus
ENSACIG00000005478	rbfox1	78	65.161	ENSMICG00000034286	RBFOX1	64	71.375	Microcebus_murinus
ENSACIG00000005478	rbfox1	68	64.983	ENSMOCG00000020932	Rbfox1	70	64.527	Microtus_ochrogaster
ENSACIG00000005478	rbfox1	71	69.965	ENSMMOG00000009716	rbfox1	70	69.965	Mola_mola
ENSACIG00000005478	rbfox1	56	68.675	ENSMODG00000005826	RBFOX1	62	68.675	Monodelphis_domestica
ENSACIG00000005478	rbfox1	68	73.978	ENSMALG00000003337	rbfox1	63	73.978	Monopterus_albus
ENSACIG00000005478	rbfox1	68	64.983	MGP_CAROLIEiJ_G0020427	Rbfox1	67	64.527	Mus_caroli
ENSACIG00000005478	rbfox1	68	66.308	ENSMUSG00000008658	Rbfox1	69	75.124	Mus_musculus
ENSACIG00000005478	rbfox1	68	64.983	MGP_PahariEiJ_G0016135	Rbfox1	67	64.527	Mus_pahari
ENSACIG00000005478	rbfox1	68	64.983	MGP_SPRETEiJ_G0021321	Rbfox1	67	64.527	Mus_spretus
ENSACIG00000005478	rbfox1	56	68.273	ENSMPUG00000014822	RBFOX1	56	68.273	Mustela_putorius_furo
ENSACIG00000005478	rbfox1	68	65.320	ENSMLUG00000015896	RBFOX1	87	64.865	Myotis_lucifugus
ENSACIG00000005478	rbfox1	68	65.320	ENSNGAG00000023276	Rbfox1	69	64.865	Nannospalax_galili
ENSACIG00000005478	rbfox1	70	59.655	ENSNBRG00000011084	rbfox1	64	59.655	Neolamprologus_brichardi
ENSACIG00000005478	rbfox1	68	71.004	ENSNLEG00000010017	-	64	71.004	Nomascus_leucogenys
ENSACIG00000005478	rbfox1	68	64.983	ENSODEG00000013166	RBFOX1	67	64.527	Octodon_degus
ENSACIG00000005478	rbfox1	56	67.871	ENSOANG00000002379	RBFOX1	59	67.871	Ornithorhynchus_anatinus
ENSACIG00000005478	rbfox1	68	64.527	ENSOGAG00000025535	RBFOX1	67	64.527	Otolemur_garnettii
ENSACIG00000005478	rbfox1	68	71.375	ENSPPAG00000036238	-	66	71.375	Pan_paniscus
ENSACIG00000005478	rbfox1	68	71.747	ENSPPRG00000006546	RBFOX1	64	71.747	Panthera_pardus
ENSACIG00000005478	rbfox1	68	59.410	ENSPTIG00000021154	RBFOX1	67	58.759	Panthera_tigris_altaica
ENSACIG00000005478	rbfox1	68	71.375	ENSPTRG00000007744	RBFOX1	64	71.375	Pan_troglodytes
ENSACIG00000005478	rbfox1	68	71.375	ENSPANG00000026500	RBFOX1	64	71.375	Papio_anubis
ENSACIG00000005478	rbfox1	68	72.491	ENSPKIG00000009667	-	67	72.491	Paramormyrops_kingsleyae
ENSACIG00000005478	rbfox1	68	64.865	ENSPSIG00000006523	RBFOX1	67	64.865	Pelodiscus_sinensis
ENSACIG00000005478	rbfox1	68	64.983	ENSPEMG00000017607	Rbfox1	67	64.527	Peromyscus_maniculatus_bairdii
ENSACIG00000005478	rbfox1	63	61.871	ENSPCIG00000026887	RBFOX1	86	62.230	Phascolarctos_cinereus
ENSACIG00000005478	rbfox1	56	68.273	ENSPPYG00000007079	-	56	68.273	Pongo_abelii
ENSACIG00000005478	rbfox1	68	62.626	ENSPCAG00000002630	RBFOX1	71	62.626	Procavia_capensis
ENSACIG00000005478	rbfox1	68	71.375	ENSPCOG00000025687	RBFOX1	64	71.375	Propithecus_coquereli
ENSACIG00000005478	rbfox1	73	58.307	ENSPVAG00000013467	RBFOX1	69	58.307	Pteropus_vampyrus
ENSACIG00000005478	rbfox1	68	73.234	ENSPNAG00000023109	rbfox1	65	73.234	Pygocentrus_nattereri
ENSACIG00000005478	rbfox1	68	64.189	ENSRNOG00000002827	Rbfox1	55	74.519	Rattus_norvegicus
ENSACIG00000005478	rbfox1	68	71.375	ENSRBIG00000044478	RBFOX1	66	71.375	Rhinopithecus_bieti
ENSACIG00000005478	rbfox1	68	71.375	ENSRROG00000044411	RBFOX1	64	71.375	Rhinopithecus_roxellana
ENSACIG00000005478	rbfox1	68	71.747	ENSSBOG00000033726	RBFOX1	64	71.747	Saimiri_boliviensis_boliviensis
ENSACIG00000005478	rbfox1	68	65.203	ENSSHAG00000009257	RBFOX1	55	87.845	Sarcophilus_harrisii
ENSACIG00000005478	rbfox1	68	56.506	ENSSFOG00015023675	rbfox1	62	56.506	Scleropages_formosus
ENSACIG00000005478	rbfox1	71	66.904	ENSSFOG00015009955	-	64	69.039	Scleropages_formosus
ENSACIG00000005478	rbfox1	74	71.331	ENSSMAG00000015505	rbfox1	68	76.015	Scophthalmus_maximus
ENSACIG00000005478	rbfox1	75	69.360	ENSSDUG00000016413	rbfox1	64	72.119	Seriola_dumerili
ENSACIG00000005478	rbfox1	81	64.907	ENSSLDG00000009353	rbfox1	72	73.622	Seriola_lalandi_dorsalis
ENSACIG00000005478	rbfox1	78	61.290	ENSSPUG00000009732	RBFOX1	68	67.766	Sphenodon_punctatus
ENSACIG00000005478	rbfox1	68	75.093	ENSSPAG00000009723	rbfox1	69	70.447	Stegastes_partitus
ENSACIG00000005478	rbfox1	68	64.189	ENSSSCG00000007917	RBFOX1	62	67.871	Sus_scrofa
ENSACIG00000005478	rbfox1	68	64.865	ENSTGUG00000004562	RBFOX1	69	64.865	Taeniopygia_guttata
ENSACIG00000005478	rbfox1	68	75.836	ENSTRUG00000020940	rbfox1	68	75.556	Takifugu_rubripes
ENSACIG00000005478	rbfox1	68	62.718	ENSTNIG00000002567	rbfox1	100	62.718	Tetraodon_nigroviridis
ENSACIG00000005478	rbfox1	68	62.290	ENSTTRG00000005700	RBFOX1	64	62.290	Tursiops_truncatus
ENSACIG00000005478	rbfox1	68	57.249	ENSUMAG00000003579	RBFOX1	65	57.249	Ursus_maritimus
ENSACIG00000005478	rbfox1	68	62.752	ENSVPAG00000001284	RBFOX1	64	62.290	Vicugna_pacos
ENSACIG00000005478	rbfox1	68	72.222	ENSVVUG00000017311	RBFOX1	53	86.559	Vulpes_vulpes