EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000005539 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3648 bases
Position: chrCCOE01000384.1:3441110-3444757
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007082	Suf	PF05843.14	4.8e-61	1	2
ENSACIP00000007082	Suf	PF05843.14	4.8e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007294	-	1812	-	ENSACIP00000007082	603 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005539	cstf3	100	86.080	ENSG00000176102	CSTF3	87	86.080	Homo_sapiens
ENSACIG00000005539	cstf3	100	93.419	ENSAPOG00000014054	cstf3	87	93.419	Acanthochromis_polyacanthus
ENSACIG00000005539	cstf3	100	85.920	ENSAMEG00000007187	CSTF3	87	85.920	Ailuropoda_melanoleuca
ENSACIG00000005539	cstf3	100	93.419	ENSAOCG00000010930	cstf3	87	93.419	Amphiprion_ocellaris
ENSACIG00000005539	cstf3	100	93.419	ENSAPEG00000007903	cstf3	87	93.419	Amphiprion_percula
ENSACIG00000005539	cstf3	100	93.900	ENSATEG00000000190	cstf3	87	93.900	Anabas_testudineus
ENSACIG00000005539	cstf3	100	86.080	ENSAPLG00000007217	CSTF3	88	86.080	Anas_platyrhynchos
ENSACIG00000005539	cstf3	100	86.400	ENSACAG00000002823	CSTF3	87	86.400	Anolis_carolinensis
ENSACIG00000005539	cstf3	100	86.080	ENSANAG00000020699	CSTF3	100	86.080	Aotus_nancymaae
ENSACIG00000005539	cstf3	100	94.382	ENSACLG00000007820	cstf3	88	94.382	Astatotilapia_calliptera
ENSACIG00000005539	cstf3	100	89.263	ENSAMXG00000014198	cstf3	87	89.263	Astyanax_mexicanus
ENSACIG00000005539	cstf3	100	86.080	ENSBTAG00000008617	CSTF3	93	86.080	Bos_taurus
ENSACIG00000005539	cstf3	99	43.628	WBGene00006307	suf-1	89	43.628	Caenorhabditis_elegans
ENSACIG00000005539	cstf3	100	86.080	ENSCJAG00000005533	CSTF3	100	86.080	Callithrix_jacchus
ENSACIG00000005539	cstf3	100	86.080	ENSCAFG00000007264	CSTF3	87	86.080	Canis_familiaris
ENSACIG00000005539	cstf3	100	86.080	ENSCAFG00020002715	CSTF3	89	86.080	Canis_lupus_dingo
ENSACIG00000005539	cstf3	100	86.080	ENSCHIG00000016418	CSTF3	100	86.080	Capra_hircus
ENSACIG00000005539	cstf3	100	86.400	ENSTSYG00000000451	CSTF3	100	86.400	Carlito_syrichta
ENSACIG00000005539	cstf3	100	69.752	ENSCAPG00000010958	CSTF3	93	69.752	Cavia_aperea
ENSACIG00000005539	cstf3	100	86.080	ENSCPOG00000005545	CSTF3	88	86.080	Cavia_porcellus
ENSACIG00000005539	cstf3	100	86.080	ENSCCAG00000024790	CSTF3	100	86.080	Cebus_capucinus
ENSACIG00000005539	cstf3	100	86.080	ENSCATG00000007080	CSTF3	100	86.080	Cercocebus_atys
ENSACIG00000005539	cstf3	100	86.080	ENSCLAG00000016179	CSTF3	87	86.080	Chinchilla_lanigera
ENSACIG00000005539	cstf3	75	97.814	ENSCHOG00000002497	CSTF3	67	97.814	Choloepus_hoffmanni
ENSACIG00000005539	cstf3	100	86.400	ENSCPBG00000006753	CSTF3	87	86.400	Chrysemys_picta_bellii
ENSACIG00000005539	cstf3	100	58.150	ENSCING00000006401	-	87	58.150	Ciona_intestinalis
ENSACIG00000005539	cstf3	100	57.571	ENSCSAVG00000004851	-	89	57.571	Ciona_savignyi
ENSACIG00000005539	cstf3	100	86.080	ENSCANG00000035468	CSTF3	100	86.080	Colobus_angolensis_palliatus
ENSACIG00000005539	cstf3	100	85.760	ENSCGRG00001014773	Cstf3	87	85.760	Cricetulus_griseus_chok1gshd
ENSACIG00000005539	cstf3	100	85.760	ENSCGRG00000004142	Cstf3	87	85.760	Cricetulus_griseus_crigri
ENSACIG00000005539	cstf3	100	92.135	ENSCSEG00000014283	cstf3	87	92.135	Cynoglossus_semilaevis
ENSACIG00000005539	cstf3	100	91.814	ENSCVAG00000019739	cstf3	87	91.814	Cyprinodon_variegatus
ENSACIG00000005539	cstf3	100	89.583	ENSDARG00000018904	cstf3	87	89.583	Danio_rerio
ENSACIG00000005539	cstf3	100	86.240	ENSDNOG00000007366	CSTF3	87	86.240	Dasypus_novemcinctus
ENSACIG00000005539	cstf3	100	79.360	ENSDORG00000005898	Cstf3	87	79.360	Dipodomys_ordii
ENSACIG00000005539	cstf3	99	52.842	FBgn0003559	su(f)	87	52.842	Drosophila_melanogaster
ENSACIG00000005539	cstf3	96	85.117	ENSETEG00000017097	CSTF3	83	85.117	Echinops_telfairi
ENSACIG00000005539	cstf3	86	70.446	ENSEBUG00000015459	cstf3	86	70.019	Eptatretus_burgeri
ENSACIG00000005539	cstf3	100	86.080	ENSEASG00005019884	CSTF3	89	86.080	Equus_asinus_asinus
ENSACIG00000005539	cstf3	100	86.080	ENSECAG00000023338	CSTF3	89	86.080	Equus_caballus
ENSACIG00000005539	cstf3	100	80.320	ENSEEUG00000015167	CSTF3	87	80.320	Erinaceus_europaeus
ENSACIG00000005539	cstf3	100	89.583	ENSELUG00000023393	cstf3	87	89.583	Esox_lucius
ENSACIG00000005539	cstf3	100	86.240	ENSFCAG00000030711	CSTF3	87	86.240	Felis_catus
ENSACIG00000005539	cstf3	100	86.240	ENSFALG00000010764	CSTF3	96	86.240	Ficedula_albicollis
ENSACIG00000005539	cstf3	100	86.240	ENSFDAG00000012082	CSTF3	87	86.240	Fukomys_damarensis
ENSACIG00000005539	cstf3	100	91.493	ENSFHEG00000020623	cstf3	87	91.493	Fundulus_heteroclitus
ENSACIG00000005539	cstf3	100	89.280	ENSGMOG00000012275	cstf3	87	89.280	Gadus_morhua
ENSACIG00000005539	cstf3	100	85.920	ENSGALG00000011685	CSTF3	87	85.920	Gallus_gallus
ENSACIG00000005539	cstf3	100	91.974	ENSGAFG00000002181	cstf3	87	91.974	Gambusia_affinis
ENSACIG00000005539	cstf3	100	91.814	ENSGACG00000015997	cstf3	87	91.814	Gasterosteus_aculeatus
ENSACIG00000005539	cstf3	100	86.400	ENSGAGG00000006200	CSTF3	87	86.400	Gopherus_agassizii
ENSACIG00000005539	cstf3	100	85.161	ENSGGOG00000026591	CSTF3	89	85.161	Gorilla_gorilla
ENSACIG00000005539	cstf3	100	94.222	ENSHBUG00000016656	cstf3	88	94.222	Haplochromis_burtoni
ENSACIG00000005539	cstf3	100	86.080	ENSHGLG00000017834	CSTF3	87	86.080	Heterocephalus_glaber_female
ENSACIG00000005539	cstf3	100	86.080	ENSHGLG00100018042	CSTF3	88	86.080	Heterocephalus_glaber_male
ENSACIG00000005539	cstf3	100	89.904	ENSHCOG00000015218	cstf3	88	89.904	Hippocampus_comes
ENSACIG00000005539	cstf3	100	88.462	ENSIPUG00000013170	CSTF3	88	88.462	Ictalurus_punctatus
ENSACIG00000005539	cstf3	100	86.080	ENSSTOG00000013306	CSTF3	87	86.080	Ictidomys_tridecemlineatus
ENSACIG00000005539	cstf3	100	79.276	ENSJJAG00000018430	Cstf3	86	79.276	Jaculus_jaculus
ENSACIG00000005539	cstf3	100	91.653	ENSKMAG00000010916	cstf3	87	91.653	Kryptolebias_marmoratus
ENSACIG00000005539	cstf3	100	91.814	ENSLBEG00000002306	cstf3	87	91.814	Labrus_bergylta
ENSACIG00000005539	cstf3	100	85.256	ENSLACG00000017296	CSTF3	87	85.256	Latimeria_chalumnae
ENSACIG00000005539	cstf3	100	89.137	ENSLOCG00000004415	cstf3	87	89.137	Lepisosteus_oculatus
ENSACIG00000005539	cstf3	100	86.080	ENSLAFG00000008712	CSTF3	87	86.080	Loxodonta_africana
ENSACIG00000005539	cstf3	100	86.080	ENSMFAG00000029516	CSTF3	100	86.080	Macaca_fascicularis
ENSACIG00000005539	cstf3	100	86.080	ENSMMUG00000002542	CSTF3	87	86.080	Macaca_mulatta
ENSACIG00000005539	cstf3	100	86.080	ENSMNEG00000021807	CSTF3	100	86.080	Macaca_nemestrina
ENSACIG00000005539	cstf3	100	86.080	ENSMLEG00000039594	CSTF3	100	86.080	Mandrillus_leucophaeus
ENSACIG00000005539	cstf3	100	93.258	ENSMAMG00000020423	cstf3	88	93.258	Mastacembelus_armatus
ENSACIG00000005539	cstf3	100	94.382	ENSMZEG00005012082	cstf3	89	94.382	Maylandia_zebra
ENSACIG00000005539	cstf3	100	85.920	ENSMGAG00000001383	CSTF3	88	85.510	Meleagris_gallopavo
ENSACIG00000005539	cstf3	100	85.600	ENSMAUG00000002487	Cstf3	87	85.600	Mesocricetus_auratus
ENSACIG00000005539	cstf3	100	86.080	ENSMICG00000004784	CSTF3	100	86.080	Microcebus_murinus
ENSACIG00000005539	cstf3	100	85.760	ENSMOCG00000017583	Cstf3	87	85.760	Microtus_ochrogaster
ENSACIG00000005539	cstf3	100	92.616	ENSMMOG00000016026	cstf3	83	92.616	Mola_mola
ENSACIG00000005539	cstf3	100	76.160	ENSMODG00000025205	-	87	76.160	Monodelphis_domestica
ENSACIG00000005539	cstf3	100	86.240	ENSMODG00000009745	-	87	86.240	Monodelphis_domestica
ENSACIG00000005539	cstf3	100	93.098	ENSMALG00000012050	cstf3	87	93.098	Monopterus_albus
ENSACIG00000005539	cstf3	100	85.760	MGP_CAROLIEiJ_G0024026	Cstf3	87	85.760	Mus_caroli
ENSACIG00000005539	cstf3	100	85.760	ENSMUSG00000027176	Cstf3	87	85.760	Mus_musculus
ENSACIG00000005539	cstf3	100	85.760	MGP_PahariEiJ_G0025464	Cstf3	87	85.760	Mus_pahari
ENSACIG00000005539	cstf3	100	85.760	MGP_SPRETEiJ_G0024939	Cstf3	87	85.760	Mus_spretus
ENSACIG00000005539	cstf3	100	85.920	ENSMPUG00000011457	CSTF3	87	85.920	Mustela_putorius_furo
ENSACIG00000005539	cstf3	100	83.520	ENSMLUG00000026022	-	87	83.520	Myotis_lucifugus
ENSACIG00000005539	cstf3	100	86.080	ENSMLUG00000003073	-	87	86.080	Myotis_lucifugus
ENSACIG00000005539	cstf3	100	85.920	ENSNGAG00000010677	Cstf3	88	85.920	Nannospalax_galili
ENSACIG00000005539	cstf3	100	94.382	ENSNBRG00000007345	cstf3	100	94.382	Neolamprologus_brichardi
ENSACIG00000005539	cstf3	100	86.080	ENSNLEG00000017901	CSTF3	100	86.080	Nomascus_leucogenys
ENSACIG00000005539	cstf3	81	89.130	ENSMEUG00000005640	-	97	89.130	Notamacropus_eugenii
ENSACIG00000005539	cstf3	62	81.783	ENSOPRG00000000199	-	52	81.783	Ochotona_princeps
ENSACIG00000005539	cstf3	100	86.240	ENSODEG00000016737	-	89	86.240	Octodon_degus
ENSACIG00000005539	cstf3	99	75.806	ENSODEG00000006311	-	95	75.806	Octodon_degus
ENSACIG00000005539	cstf3	100	94.382	ENSONIG00000005563	cstf3	87	94.382	Oreochromis_niloticus
ENSACIG00000005539	cstf3	100	85.669	ENSOANG00000015140	CSTF3	96	85.669	Ornithorhynchus_anatinus
ENSACIG00000005539	cstf3	100	85.920	ENSOCUG00000015417	CSTF3	87	85.920	Oryctolagus_cuniculus
ENSACIG00000005539	cstf3	100	91.814	ENSORLG00000009762	cstf3	87	91.814	Oryzias_latipes
ENSACIG00000005539	cstf3	100	91.814	ENSORLG00020005540	cstf3	88	91.814	Oryzias_latipes_hni
ENSACIG00000005539	cstf3	100	91.653	ENSORLG00015003551	cstf3	89	91.653	Oryzias_latipes_hsok
ENSACIG00000005539	cstf3	100	92.456	ENSOMEG00000003848	cstf3	91	92.456	Oryzias_melastigma
ENSACIG00000005539	cstf3	100	85.533	ENSOGAG00000010229	CSTF3	87	85.533	Otolemur_garnettii
ENSACIG00000005539	cstf3	100	86.080	ENSOARG00000017271	CSTF3	96	86.080	Ovis_aries
ENSACIG00000005539	cstf3	100	84.000	ENSPPAG00000027358	CSTF3	89	84.000	Pan_paniscus
ENSACIG00000005539	cstf3	100	86.240	ENSPPRG00000016852	CSTF3	87	86.240	Panthera_pardus
ENSACIG00000005539	cstf3	100	86.240	ENSPTIG00000008716	CSTF3	87	86.240	Panthera_tigris_altaica
ENSACIG00000005539	cstf3	100	86.080	ENSPTRG00000003485	CSTF3	89	84.320	Pan_troglodytes
ENSACIG00000005539	cstf3	100	86.080	ENSPANG00000013722	CSTF3	78	96.399	Papio_anubis
ENSACIG00000005539	cstf3	100	88.462	ENSPKIG00000023648	cstf3	87	88.462	Paramormyrops_kingsleyae
ENSACIG00000005539	cstf3	100	86.400	ENSPSIG00000009173	CSTF3	87	86.400	Pelodiscus_sinensis
ENSACIG00000005539	cstf3	72	92.982	ENSPMGG00000000164	cstf3	83	92.982	Periophthalmus_magnuspinnatus
ENSACIG00000005539	cstf3	100	85.760	ENSPEMG00000011481	Cstf3	87	85.760	Peromyscus_maniculatus_bairdii
ENSACIG00000005539	cstf3	100	75.120	ENSPMAG00000007282	cstf3	87	75.478	Petromyzon_marinus
ENSACIG00000005539	cstf3	100	72.045	ENSPCIG00000030419	-	78	72.364	Phascolarctos_cinereus
ENSACIG00000005539	cstf3	100	87.019	ENSPCIG00000026406	-	100	86.560	Phascolarctos_cinereus
ENSACIG00000005539	cstf3	100	91.974	ENSPFOG00000017239	cstf3	87	91.974	Poecilia_formosa
ENSACIG00000005539	cstf3	100	92.135	ENSPLAG00000009456	cstf3	87	92.135	Poecilia_latipinna
ENSACIG00000005539	cstf3	100	91.974	ENSPMEG00000010320	cstf3	87	91.974	Poecilia_mexicana
ENSACIG00000005539	cstf3	100	91.814	ENSPREG00000013549	cstf3	88	91.814	Poecilia_reticulata
ENSACIG00000005539	cstf3	100	86.080	ENSPPYG00000003375	CSTF3	87	86.080	Pongo_abelii
ENSACIG00000005539	cstf3	63	100.000	ENSPCAG00000008025	-	54	100.000	Procavia_capensis
ENSACIG00000005539	cstf3	100	82.080	ENSPCOG00000014417	CSTF3	88	82.080	Propithecus_coquereli
ENSACIG00000005539	cstf3	100	82.080	ENSPVAG00000002350	CSTF3	87	82.080	Pteropus_vampyrus
ENSACIG00000005539	cstf3	100	94.222	ENSPNYG00000018259	cstf3	89	94.222	Pundamilia_nyererei
ENSACIG00000005539	cstf3	100	90.064	ENSPNAG00000020182	cstf3	100	82.372	Pygocentrus_nattereri
ENSACIG00000005539	cstf3	100	85.440	ENSRNOG00000012089	Cstf3	100	85.440	Rattus_norvegicus
ENSACIG00000005539	cstf3	100	86.080	ENSRBIG00000044258	CSTF3	100	86.080	Rhinopithecus_bieti
ENSACIG00000005539	cstf3	100	86.080	ENSRROG00000043450	CSTF3	100	86.080	Rhinopithecus_roxellana
ENSACIG00000005539	cstf3	100	86.080	ENSSBOG00000024764	CSTF3	100	86.080	Saimiri_boliviensis_boliviensis
ENSACIG00000005539	cstf3	100	76.640	ENSSHAG00000003135	-	86	76.640	Sarcophilus_harrisii
ENSACIG00000005539	cstf3	100	86.240	ENSSHAG00000018128	-	87	86.240	Sarcophilus_harrisii
ENSACIG00000005539	cstf3	100	88.942	ENSSFOG00015022133	cstf3	87	88.942	Scleropages_formosus
ENSACIG00000005539	cstf3	100	92.456	ENSSMAG00000002197	cstf3	87	92.456	Scophthalmus_maximus
ENSACIG00000005539	cstf3	100	93.900	ENSSDUG00000020426	cstf3	87	93.900	Seriola_dumerili
ENSACIG00000005539	cstf3	100	93.740	ENSSLDG00000025649	cstf3	91	93.740	Seriola_lalandi_dorsalis
ENSACIG00000005539	cstf3	100	85.760	ENSSARG00000000391	CSTF3	87	85.760	Sorex_araneus
ENSACIG00000005539	cstf3	100	85.760	ENSSPUG00000010546	CSTF3	90	85.760	Sphenodon_punctatus
ENSACIG00000005539	cstf3	100	93.258	ENSSPAG00000004958	cstf3	87	93.258	Stegastes_partitus
ENSACIG00000005539	cstf3	100	85.920	ENSSSCG00000040954	CSTF3	87	85.920	Sus_scrofa
ENSACIG00000005539	cstf3	100	86.240	ENSTGUG00000005010	CSTF3	88	86.240	Taeniopygia_guttata
ENSACIG00000005539	cstf3	100	91.186	ENSTRUG00000004959	cstf3	90	88.622	Takifugu_rubripes
ENSACIG00000005539	cstf3	100	92.308	ENSTNIG00000013811	cstf3	87	92.308	Tetraodon_nigroviridis
ENSACIG00000005539	cstf3	100	83.200	ENSTBEG00000001544	CSTF3	88	83.200	Tupaia_belangeri
ENSACIG00000005539	cstf3	100	82.880	ENSTTRG00000016366	CSTF3	87	82.880	Tursiops_truncatus
ENSACIG00000005539	cstf3	100	85.760	ENSUMAG00000018971	CSTF3	100	85.760	Ursus_maritimus
ENSACIG00000005539	cstf3	100	85.920	ENSVPAG00000007800	CSTF3	87	85.920	Vicugna_pacos
ENSACIG00000005539	cstf3	100	86.080	ENSVVUG00000014938	CSTF3	100	86.080	Vulpes_vulpes
ENSACIG00000005539	cstf3	97	73.071	ENSXETG00000021399	cstf3	99	73.071	Xenopus_tropicalis
ENSACIG00000005539	cstf3	100	92.432	ENSXCOG00000011741	cstf3	100	92.432	Xiphophorus_couchianus
ENSACIG00000005539	cstf3	100	91.974	ENSXMAG00000009545	cstf3	87	91.974	Xiphophorus_maculatus