EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000005579 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 28334 bases
Position: chrCCOE01001760.1:1649-29982
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007142	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007356	-	1533	-	ENSACIP00000007142	510 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000005579	prpf4	56	32.500	ENSACIG00000018288	poc1a	79	32.500
ENSACIG00000005579	prpf4	58	31.527	ENSACIG00000001424	wdr5	90	31.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005579	prpf4	99	77.183	ENSG00000136875	PRPF4	96	77.183	Homo_sapiens
ENSACIG00000005579	prpf4	99	94.410	ENSAPOG00000014132	prpf4	99	94.410	Acanthochromis_polyacanthus
ENSACIG00000005579	prpf4	99	77.183	ENSAMEG00000013048	PRPF4	94	77.183	Ailuropoda_melanoleuca
ENSACIG00000005579	prpf4	100	94.706	ENSAOCG00000005457	prpf4	100	94.706	Amphiprion_ocellaris
ENSACIG00000005579	prpf4	100	94.510	ENSAPEG00000000776	prpf4	100	94.510	Amphiprion_percula
ENSACIG00000005579	prpf4	100	95.098	ENSATEG00000023013	prpf4	100	95.098	Anabas_testudineus
ENSACIG00000005579	prpf4	99	77.515	ENSAPLG00000006534	PRPF4	94	77.515	Anas_platyrhynchos
ENSACIG00000005579	prpf4	99	76.125	ENSACAG00000015110	PRPF4	98	76.125	Anolis_carolinensis
ENSACIG00000005579	prpf4	99	77.183	ENSANAG00000022464	PRPF4	93	77.183	Aotus_nancymaae
ENSACIG00000005579	prpf4	100	96.667	ENSACLG00000019031	prpf4	100	96.667	Astatotilapia_calliptera
ENSACIG00000005579	prpf4	100	60.837	ENSAMXG00000006756	prpf4	100	74.118	Astyanax_mexicanus
ENSACIG00000005579	prpf4	99	77.183	ENSBTAG00000004571	PRPF4	96	77.183	Bos_taurus
ENSACIG00000005579	prpf4	92	44.492	WBGene00007972	prp-4	95	44.492	Caenorhabditis_elegans
ENSACIG00000005579	prpf4	99	77.183	ENSCJAG00000017856	PRPF4	96	77.183	Callithrix_jacchus
ENSACIG00000005579	prpf4	99	77.183	ENSCAFG00000003224	PRPF4	93	77.183	Canis_familiaris
ENSACIG00000005579	prpf4	99	77.183	ENSCAFG00020022637	PRPF4	97	77.183	Canis_lupus_dingo
ENSACIG00000005579	prpf4	99	77.183	ENSCHIG00000024648	-	96	77.183	Capra_hircus
ENSACIG00000005579	prpf4	99	77.381	ENSTSYG00000010366	PRPF4	96	77.381	Carlito_syrichta
ENSACIG00000005579	prpf4	90	69.928	ENSCAPG00000008935	PRPF4	97	69.928	Cavia_aperea
ENSACIG00000005579	prpf4	99	71.825	ENSCPOG00000014729	-	96	71.825	Cavia_porcellus
ENSACIG00000005579	prpf4	99	76.786	ENSCPOG00000010747	-	96	76.786	Cavia_porcellus
ENSACIG00000005579	prpf4	99	77.381	ENSCCAG00000028990	PRPF4	96	77.381	Cebus_capucinus
ENSACIG00000005579	prpf4	99	77.183	ENSCATG00000021552	PRPF4	96	77.183	Cercocebus_atys
ENSACIG00000005579	prpf4	99	77.183	ENSCLAG00000013448	PRPF4	96	77.183	Chinchilla_lanigera
ENSACIG00000005579	prpf4	89	76.549	ENSCHOG00000007233	PRPF4	100	76.549	Choloepus_hoffmanni
ENSACIG00000005579	prpf4	100	76.667	ENSCPBG00000019136	PRPF4	73	76.923	Chrysemys_picta_bellii
ENSACIG00000005579	prpf4	97	60.521	ENSCING00000001299	-	95	60.521	Ciona_intestinalis
ENSACIG00000005579	prpf4	99	58.743	ENSCSAVG00000009178	-	99	60.823	Ciona_savignyi
ENSACIG00000005579	prpf4	99	77.183	ENSCANG00000003246	PRPF4	96	77.183	Colobus_angolensis_palliatus
ENSACIG00000005579	prpf4	99	76.984	ENSCGRG00001016992	Prpf4	96	76.984	Cricetulus_griseus_chok1gshd
ENSACIG00000005579	prpf4	99	76.984	ENSCGRG00000017560	Prpf4	96	76.984	Cricetulus_griseus_crigri
ENSACIG00000005579	prpf4	100	89.020	ENSCSEG00000020451	prpf4	100	89.020	Cynoglossus_semilaevis
ENSACIG00000005579	prpf4	100	80.784	ENSDARG00000067639	prpf4	100	80.784	Danio_rerio
ENSACIG00000005579	prpf4	99	76.984	ENSDNOG00000013203	PRPF4	96	76.984	Dasypus_novemcinctus
ENSACIG00000005579	prpf4	99	77.579	ENSDORG00000026275	Prpf4	96	77.579	Dipodomys_ordii
ENSACIG00000005579	prpf4	99	50.182	FBgn0036733	U4-U6-60K	99	50.364	Drosophila_melanogaster
ENSACIG00000005579	prpf4	99	77.778	ENSETEG00000020389	PRPF4	96	77.778	Echinops_telfairi
ENSACIG00000005579	prpf4	99	68.989	ENSEBUG00000015229	prpf4	88	69.663	Eptatretus_burgeri
ENSACIG00000005579	prpf4	99	77.183	ENSEASG00005022678	PRPF4	96	77.183	Equus_asinus_asinus
ENSACIG00000005579	prpf4	99	77.183	ENSECAG00000007072	PRPF4	96	77.183	Equus_caballus
ENSACIG00000005579	prpf4	84	81.590	ENSEEUG00000007480	PRPF4	96	61.364	Erinaceus_europaeus
ENSACIG00000005579	prpf4	100	81.373	ENSELUG00000007510	prpf4	100	81.373	Esox_lucius
ENSACIG00000005579	prpf4	99	77.183	ENSFCAG00000005514	PRPF4	96	77.183	Felis_catus
ENSACIG00000005579	prpf4	99	76.975	ENSFALG00000005423	PRPF4	85	76.975	Ficedula_albicollis
ENSACIG00000005579	prpf4	99	77.183	ENSFDAG00000005839	PRPF4	96	77.183	Fukomys_damarensis
ENSACIG00000005579	prpf4	100	92.353	ENSFHEG00000001300	prpf4	100	92.353	Fundulus_heteroclitus
ENSACIG00000005579	prpf4	99	77.515	ENSGALG00000008857	PRPF4	94	77.515	Gallus_gallus
ENSACIG00000005579	prpf4	85	88.450	ENSGAFG00000012164	prpf4	68	88.450	Gambusia_affinis
ENSACIG00000005579	prpf4	100	80.859	ENSGACG00000015476	prpf4	100	80.664	Gasterosteus_aculeatus
ENSACIG00000005579	prpf4	100	76.275	ENSGAGG00000025029	PRPF4	94	76.529	Gopherus_agassizii
ENSACIG00000005579	prpf4	99	77.183	ENSGGOG00000006943	PRPF4	96	77.183	Gorilla_gorilla
ENSACIG00000005579	prpf4	100	96.471	ENSHBUG00000000562	prpf4	100	96.471	Haplochromis_burtoni
ENSACIG00000005579	prpf4	99	62.897	ENSHGLG00000003838	-	96	62.897	Heterocephalus_glaber_female
ENSACIG00000005579	prpf4	99	76.984	ENSHGLG00000015191	PRPF4	96	76.984	Heterocephalus_glaber_female
ENSACIG00000005579	prpf4	95	66.667	ENSHGLG00000016628	-	95	67.076	Heterocephalus_glaber_female
ENSACIG00000005579	prpf4	99	62.897	ENSHGLG00100005571	-	96	62.897	Heterocephalus_glaber_male
ENSACIG00000005579	prpf4	100	79.412	ENSIPUG00000017956	PRPF4	100	79.412	Ictalurus_punctatus
ENSACIG00000005579	prpf4	99	77.183	ENSSTOG00000027833	PRPF4	96	77.183	Ictidomys_tridecemlineatus
ENSACIG00000005579	prpf4	99	77.183	ENSJJAG00000008838	Prpf4	96	77.183	Jaculus_jaculus
ENSACIG00000005579	prpf4	100	92.353	ENSKMAG00000013236	prpf4	100	92.353	Kryptolebias_marmoratus
ENSACIG00000005579	prpf4	100	94.314	ENSLBEG00000020611	prpf4	100	94.314	Labrus_bergylta
ENSACIG00000005579	prpf4	100	73.438	ENSLACG00000016317	PRPF4	97	73.438	Latimeria_chalumnae
ENSACIG00000005579	prpf4	100	81.765	ENSLOCG00000000581	prpf4	100	81.765	Lepisosteus_oculatus
ENSACIG00000005579	prpf4	99	77.183	ENSLAFG00000018225	PRPF4	96	77.183	Loxodonta_africana
ENSACIG00000005579	prpf4	99	76.984	ENSMFAG00000039397	PRPF4	96	76.984	Macaca_fascicularis
ENSACIG00000005579	prpf4	99	77.183	ENSMMUG00000005844	PRPF4	96	77.183	Macaca_mulatta
ENSACIG00000005579	prpf4	99	68.254	ENSMNEG00000033737	PRPF4	96	68.254	Macaca_nemestrina
ENSACIG00000005579	prpf4	99	77.183	ENSMLEG00000040284	PRPF4	96	77.183	Mandrillus_leucophaeus
ENSACIG00000005579	prpf4	100	94.510	ENSMAMG00000020141	prpf4	100	94.510	Mastacembelus_armatus
ENSACIG00000005579	prpf4	100	96.667	ENSMZEG00005023205	prpf4	100	96.667	Maylandia_zebra
ENSACIG00000005579	prpf4	99	76.923	ENSMGAG00000001796	PRPF4	94	76.923	Meleagris_gallopavo
ENSACIG00000005579	prpf4	99	76.984	ENSMAUG00000018022	Prpf4	96	76.984	Mesocricetus_auratus
ENSACIG00000005579	prpf4	99	76.621	ENSMICG00000015022	PRPF4	97	76.621	Microcebus_murinus
ENSACIG00000005579	prpf4	99	76.984	ENSMOCG00000018273	Prpf4	96	76.984	Microtus_ochrogaster
ENSACIG00000005579	prpf4	100	90.784	ENSMMOG00000021177	prpf4	100	90.784	Mola_mola
ENSACIG00000005579	prpf4	99	76.331	ENSMODG00000025096	-	94	76.331	Monodelphis_domestica
ENSACIG00000005579	prpf4	99	76.923	ENSMODG00000004444	-	97	76.923	Monodelphis_domestica
ENSACIG00000005579	prpf4	100	94.706	ENSMALG00000013624	prpf4	100	94.706	Monopterus_albus
ENSACIG00000005579	prpf4	99	76.984	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.984	Mus_caroli
ENSACIG00000005579	prpf4	99	76.984	ENSMUSG00000066148	Prpf4	96	76.984	Mus_musculus
ENSACIG00000005579	prpf4	99	77.183	MGP_PahariEiJ_G0028413	Prpf4	96	77.183	Mus_pahari
ENSACIG00000005579	prpf4	99	76.984	MGP_SPRETEiJ_G0027042	Prpf4	96	76.984	Mus_spretus
ENSACIG00000005579	prpf4	99	77.183	ENSMPUG00000007883	PRPF4	96	77.183	Mustela_putorius_furo
ENSACIG00000005579	prpf4	99	75.595	ENSMLUG00000008626	-	94	75.595	Myotis_lucifugus
ENSACIG00000005579	prpf4	99	76.984	ENSMLUG00000015309	-	93	76.984	Myotis_lucifugus
ENSACIG00000005579	prpf4	99	72.024	ENSNGAG00000000468	Prpf4	96	72.024	Nannospalax_galili
ENSACIG00000005579	prpf4	100	96.863	ENSNBRG00000007972	prpf4	100	96.863	Neolamprologus_brichardi
ENSACIG00000005579	prpf4	99	77.183	ENSNLEG00000016647	PRPF4	96	77.183	Nomascus_leucogenys
ENSACIG00000005579	prpf4	99	76.529	ENSMEUG00000013256	PRPF4	98	76.529	Notamacropus_eugenii
ENSACIG00000005579	prpf4	99	77.381	ENSOPRG00000005302	PRPF4	96	77.381	Ochotona_princeps
ENSACIG00000005579	prpf4	99	77.183	ENSODEG00000018147	PRPF4	96	77.183	Octodon_degus
ENSACIG00000005579	prpf4	100	96.471	ENSONIG00000012671	prpf4	100	96.471	Oreochromis_niloticus
ENSACIG00000005579	prpf4	99	77.381	ENSOCUG00000005046	PRPF4	96	77.381	Oryctolagus_cuniculus
ENSACIG00000005579	prpf4	100	90.784	ENSORLG00000019641	prpf4	100	90.784	Oryzias_latipes
ENSACIG00000005579	prpf4	100	90.784	ENSORLG00020019438	prpf4	100	90.784	Oryzias_latipes_hni
ENSACIG00000005579	prpf4	100	89.804	ENSOMEG00000020941	prpf4	100	90.476	Oryzias_melastigma
ENSACIG00000005579	prpf4	99	73.016	ENSOGAG00000007802	PRPF4	94	73.016	Otolemur_garnettii
ENSACIG00000005579	prpf4	99	77.183	ENSOARG00000006319	PRPF4	93	77.183	Ovis_aries
ENSACIG00000005579	prpf4	99	77.183	ENSPPAG00000041797	PRPF4	96	77.183	Pan_paniscus
ENSACIG00000005579	prpf4	99	77.183	ENSPPRG00000014360	PRPF4	96	77.183	Panthera_pardus
ENSACIG00000005579	prpf4	99	77.183	ENSPTIG00000009574	PRPF4	96	77.183	Panthera_tigris_altaica
ENSACIG00000005579	prpf4	99	77.183	ENSPTRG00000021274	PRPF4	96	77.183	Pan_troglodytes
ENSACIG00000005579	prpf4	99	77.381	ENSPANG00000025776	PRPF4	92	77.381	Papio_anubis
ENSACIG00000005579	prpf4	100	81.569	ENSPKIG00000017259	prpf4	100	81.569	Paramormyrops_kingsleyae
ENSACIG00000005579	prpf4	99	76.726	ENSPSIG00000010713	PRPF4	89	76.726	Pelodiscus_sinensis
ENSACIG00000005579	prpf4	100	65.428	ENSPMGG00000000997	prpf4	98	66.729	Periophthalmus_magnuspinnatus
ENSACIG00000005579	prpf4	99	76.984	ENSPEMG00000024115	Prpf4	96	76.984	Peromyscus_maniculatus_bairdii
ENSACIG00000005579	prpf4	99	76.726	ENSPCIG00000003821	PRPF4	98	76.726	Phascolarctos_cinereus
ENSACIG00000005579	prpf4	100	84.630	ENSPFOG00000013524	prpf4	99	88.146	Poecilia_formosa
ENSACIG00000005579	prpf4	84	86.769	ENSPLAG00000011620	prpf4	97	86.687	Poecilia_latipinna
ENSACIG00000005579	prpf4	98	88.496	ENSPMEG00000006813	prpf4	100	88.496	Poecilia_mexicana
ENSACIG00000005579	prpf4	99	76.984	ENSPCAG00000002561	PRPF4	98	76.984	Procavia_capensis
ENSACIG00000005579	prpf4	99	76.984	ENSPCOG00000011975	PRPF4	96	76.984	Propithecus_coquereli
ENSACIG00000005579	prpf4	99	74.206	ENSPVAG00000004708	PRPF4	96	74.206	Pteropus_vampyrus
ENSACIG00000005579	prpf4	100	96.667	ENSPNYG00000008013	prpf4	100	96.667	Pundamilia_nyererei
ENSACIG00000005579	prpf4	100	81.176	ENSPNAG00000000697	prpf4	100	81.176	Pygocentrus_nattereri
ENSACIG00000005579	prpf4	99	76.984	ENSRNOG00000014777	Prpf4	96	76.984	Rattus_norvegicus
ENSACIG00000005579	prpf4	99	77.183	ENSRBIG00000040221	PRPF4	96	77.183	Rhinopithecus_bieti
ENSACIG00000005579	prpf4	99	77.183	ENSRROG00000040240	PRPF4	96	77.183	Rhinopithecus_roxellana
ENSACIG00000005579	prpf4	99	76.726	ENSSHAG00000017658	PRPF4	97	76.726	Sarcophilus_harrisii
ENSACIG00000005579	prpf4	100	81.765	ENSSFOG00015008963	prpf4	100	81.765	Scleropages_formosus
ENSACIG00000005579	prpf4	100	91.765	ENSSMAG00000008889	prpf4	100	91.765	Scophthalmus_maximus
ENSACIG00000005579	prpf4	99	95.031	ENSSDUG00000022083	prpf4	94	95.031	Seriola_dumerili
ENSACIG00000005579	prpf4	99	95.031	ENSSLDG00000008115	prpf4	94	95.031	Seriola_lalandi_dorsalis
ENSACIG00000005579	prpf4	99	76.817	ENSSPUG00000015582	PRPF4	97	76.817	Sphenodon_punctatus
ENSACIG00000005579	prpf4	100	87.524	ENSSPAG00000011286	prpf4	100	87.524	Stegastes_partitus
ENSACIG00000005579	prpf4	99	77.183	ENSSSCG00000024648	PRPF4	96	77.183	Sus_scrofa
ENSACIG00000005579	prpf4	97	78.586	ENSTGUG00000002623	PRPF4	100	78.819	Taeniopygia_guttata
ENSACIG00000005579	prpf4	100	88.235	ENSTRUG00000008853	prpf4	100	88.235	Takifugu_rubripes
ENSACIG00000005579	prpf4	100	88.039	ENSTNIG00000013250	prpf4	100	88.039	Tetraodon_nigroviridis
ENSACIG00000005579	prpf4	99	70.238	ENSTBEG00000000821	PRPF4	96	70.238	Tupaia_belangeri
ENSACIG00000005579	prpf4	89	79.195	ENSTTRG00000003246	PRPF4	85	79.195	Tursiops_truncatus
ENSACIG00000005579	prpf4	62	72.555	ENSUAMG00000018288	PRPF4	88	73.463	Ursus_americanus
ENSACIG00000005579	prpf4	99	76.587	ENSUMAG00000019375	PRPF4	96	76.587	Ursus_maritimus
ENSACIG00000005579	prpf4	99	76.786	ENSVPAG00000005281	PRPF4	96	76.786	Vicugna_pacos
ENSACIG00000005579	prpf4	99	76.529	ENSVVUG00000002476	PRPF4	99	76.529	Vulpes_vulpes
ENSACIG00000005579	prpf4	70	64.286	ENSXCOG00000006101	prpf4	93	67.482	Xiphophorus_couchianus
ENSACIG00000005579	prpf4	91	76.559	ENSXMAG00000002750	prpf4	100	78.039	Xiphophorus_maculatus