EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000005689 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 6662 bases
Position: chrCCOE01001332.1:25407-32068
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007275	RNase_Zc3h12a	PF11977.8	4.7e-65	1	1
ENSACIP00000007260	RNase_Zc3h12a	PF11977.8	1.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007491	-	2529	-	ENSACIP00000007275	842 (aa)	-	-
ENSACIT00000007476	-	951	-	ENSACIP00000007260	316 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000005689	-	73	56.087	ENSACIG00000006790	-	90	45.098
ENSACIG00000005689	-	78	78.367	ENSACIG00000001362	-	97	47.250
ENSACIG00000005689	-	75	58.403	ENSACIG00000004135	si:dkey-206d17.12	99	50.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005689	-	73	70.130	ENSG00000102053	ZC3H12B	63	56.651	Homo_sapiens
ENSACIG00000005689	-	73	69.697	ENSAPLG00000003874	ZC3H12B	99	72.638	Anas_platyrhynchos
ENSACIG00000005689	-	73	69.231	ENSACAG00000013582	ZC3H12B	90	41.089	Anolis_carolinensis
ENSACIG00000005689	-	94	55.051	ENSAMXG00000005320	-	100	49.306	Astyanax_mexicanus
ENSACIG00000005689	-	99	47.362	ENSAMXG00000038308	-	100	47.696	Astyanax_mexicanus
ENSACIG00000005689	-	73	69.492	ENSBTAG00000002206	ZC3H12B	60	61.697	Bos_taurus
ENSACIG00000005689	-	73	69.697	ENSCCAG00000030171	ZC3H12B	68	55.142	Cebus_capucinus
ENSACIG00000005689	-	73	70.130	ENSCATG00000044845	ZC3H12B	52	54.989	Cercocebus_atys
ENSACIG00000005689	-	73	69.528	ENSCLAG00000003600	ZC3H12B	63	64.706	Chinchilla_lanigera
ENSACIG00000005689	-	73	70.130	ENSCSAG00000011955	-	74	60.284	Chlorocebus_sabaeus
ENSACIG00000005689	-	73	66.255	ENSCPBG00000006983	ZC3H12B	87	43.261	Chrysemys_picta_bellii
ENSACIG00000005689	-	73	70.130	ENSCANG00000006746	ZC3H12B	52	54.989	Colobus_angolensis_palliatus
ENSACIG00000005689	-	74	70.513	ENSDARG00000062463	zc3h12b	94	42.143	Danio_rerio
ENSACIG00000005689	-	73	66.953	ENSDNOG00000038439	ZC3H12B	89	40.428	Dasypus_novemcinctus
ENSACIG00000005689	-	73	69.697	ENSECAG00000020993	ZC3H12B	75	59.286	Equus_caballus
ENSACIG00000005689	-	73	71.610	ENSELUG00000010689	zc3h12b	78	42.964	Esox_lucius
ENSACIG00000005689	-	73	70.130	ENSFCAG00000032299	ZC3H12B	63	56.751	Felis_catus
ENSACIG00000005689	-	75	66.406	ENSFALG00000004293	ZC3H12B	77	65.230	Ficedula_albicollis
ENSACIG00000005689	-	73	67.382	ENSFDAG00000014258	ZC3H12B	69	59.640	Fukomys_damarensis
ENSACIG00000005689	-	74	90.878	ENSFHEG00000014717	-	94	90.260	Fundulus_heteroclitus
ENSACIG00000005689	-	75	66.939	ENSGALG00000039391	ZC3H12B	91	41.939	Gallus_gallus
ENSACIG00000005689	-	77	83.065	ENSGAFG00000004701	-	99	59.695	Gambusia_affinis
ENSACIG00000005689	-	73	67.932	ENSGAGG00000005569	ZC3H12B	87	43.389	Gopherus_agassizii
ENSACIG00000005689	-	73	70.130	ENSGGOG00000024638	ZC3H12B	63	56.818	Gorilla_gorilla
ENSACIG00000005689	-	74	90.987	ENSHBUG00000003376	-	91	85.065	Haplochromis_burtoni
ENSACIG00000005689	-	73	65.844	ENSHGLG00000003107	ZC3H12B	66	54.505	Heterocephalus_glaber_female
ENSACIG00000005689	-	73	65.844	ENSHGLG00100010721	ZC3H12B	66	54.505	Heterocephalus_glaber_male
ENSACIG00000005689	-	74	78.723	ENSHCOG00000017425	-	98	62.955	Hippocampus_comes
ENSACIG00000005689	-	73	79.221	ENSIPUG00000014830	-	100	50.517	Ictalurus_punctatus
ENSACIG00000005689	-	74	70.588	ENSIPUG00000016745	zc3h12b	81	42.435	Ictalurus_punctatus
ENSACIG00000005689	-	73	68.831	ENSSTOG00000020962	ZC3H12B	90	39.901	Ictidomys_tridecemlineatus
ENSACIG00000005689	-	73	68.398	ENSJJAG00000015755	Zc3h12b	90	38.828	Jaculus_jaculus
ENSACIG00000005689	-	73	69.658	ENSLACG00000014526	ZC3H12B	87	41.881	Latimeria_chalumnae
ENSACIG00000005689	-	73	80.519	ENSLOCG00000010717	-	97	47.978	Lepisosteus_oculatus
ENSACIG00000005689	-	73	70.563	ENSLOCG00000014631	zc3h12b	80	42.733	Lepisosteus_oculatus
ENSACIG00000005689	-	73	68.776	ENSLAFG00000014891	ZC3H12B	57	63.342	Loxodonta_africana
ENSACIG00000005689	-	73	70.130	ENSMFAG00000042237	ZC3H12B	52	54.989	Macaca_fascicularis
ENSACIG00000005689	-	73	70.130	ENSMMUG00000012261	ZC3H12B	52	54.989	Macaca_mulatta
ENSACIG00000005689	-	73	70.130	ENSMNEG00000043003	ZC3H12B	52	54.989	Macaca_nemestrina
ENSACIG00000005689	-	73	70.130	ENSMLEG00000042630	ZC3H12B	52	54.989	Mandrillus_leucophaeus
ENSACIG00000005689	-	75	65.625	ENSMGAG00000000759	ZC3H12B	90	42.163	Meleagris_gallopavo
ENSACIG00000005689	-	73	70.563	ENSMICG00000010697	ZC3H12B	93	40.758	Microcebus_murinus
ENSACIG00000005689	-	73	70.130	ENSMOCG00000000094	Zc3h12b	72	56.651	Microtus_ochrogaster
ENSACIG00000005689	-	74	69.583	ENSMMOG00000008734	zc3h12b	52	56.674	Mola_mola
ENSACIG00000005689	-	74	68.908	ENSMODG00000005206	ZC3H12B	88	42.199	Monodelphis_domestica
ENSACIG00000005689	-	99	65.278	ENSMALG00000016807	-	99	65.741	Monopterus_albus
ENSACIG00000005689	-	73	68.511	ENSMUSG00000035045	Zc3h12b	66	88.571	Mus_musculus
ENSACIG00000005689	-	73	68.398	MGP_PahariEiJ_G0031787	Zc3h12b	72	55.734	Mus_pahari
ENSACIG00000005689	-	73	68.511	MGP_SPRETEiJ_G0034413	Zc3h12b	72	56.422	Mus_spretus
ENSACIG00000005689	-	73	70.386	ENSMLUG00000013635	ZC3H12B	89	41.514	Myotis_lucifugus
ENSACIG00000005689	-	73	70.130	ENSNLEG00000000383	ZC3H12B	63	56.651	Nomascus_leucogenys
ENSACIG00000005689	-	77	42.608	ENSMEUG00000014075	ZC3H12B	86	43.759	Notamacropus_eugenii
ENSACIG00000005689	-	74	69.362	ENSOCUG00000006130	ZC3H12B	90	40.560	Oryctolagus_cuniculus
ENSACIG00000005689	-	74	84.255	ENSORLG00000009188	-	97	84.036	Oryzias_latipes
ENSACIG00000005689	-	74	84.255	ENSORLG00020019033	-	95	84.036	Oryzias_latipes_hni
ENSACIG00000005689	-	74	83.404	ENSORLG00015020619	-	97	78.764	Oryzias_latipes_hsok
ENSACIG00000005689	-	74	84.681	ENSOMEG00000018642	-	99	60.782	Oryzias_melastigma
ENSACIG00000005689	-	73	69.828	ENSOGAG00000029439	ZC3H12B	66	57.541	Otolemur_garnettii
ENSACIG00000005689	-	73	69.068	ENSOARG00000004959	ZC3H12B	60	61.183	Ovis_aries
ENSACIG00000005689	-	73	70.130	ENSPPAG00000039530	ZC3H12B	63	56.651	Pan_paniscus
ENSACIG00000005689	-	73	70.130	ENSPTRG00000021969	ZC3H12B	63	56.651	Pan_troglodytes
ENSACIG00000005689	-	73	70.130	ENSPANG00000007944	ZC3H12B	52	54.989	Papio_anubis
ENSACIG00000005689	-	73	80.087	ENSPKIG00000012595	-	94	47.494	Paramormyrops_kingsleyae
ENSACIG00000005689	-	73	71.488	ENSPKIG00000019893	ZC3H12B	89	43.918	Paramormyrops_kingsleyae
ENSACIG00000005689	-	73	69.008	ENSPSIG00000016853	ZC3H12B	87	43.059	Pelodiscus_sinensis
ENSACIG00000005689	-	73	68.619	ENSPCIG00000020264	ZC3H12B	87	41.635	Phascolarctos_cinereus
ENSACIG00000005689	-	74	89.270	ENSPLAG00000011687	-	80	86.831	Poecilia_latipinna
ENSACIG00000005689	-	51	68.525	ENSPPYG00000020416	ZC3H12B	55	68.525	Pongo_abelii
ENSACIG00000005689	-	73	70.130	ENSPCOG00000020467	ZC3H12B	93	40.451	Propithecus_coquereli
ENSACIG00000005689	-	62	54.785	ENSPVAG00000017352	ZC3H12B	84	37.004	Pteropus_vampyrus
ENSACIG00000005689	-	73	77.056	ENSPNYG00000015874	-	78	76.395	Pundamilia_nyererei
ENSACIG00000005689	-	91	98.077	ENSPNYG00000007151	-	98	77.214	Pundamilia_nyererei
ENSACIG00000005689	-	73	79.741	ENSPNAG00000017483	-	100	52.800	Pygocentrus_nattereri
ENSACIG00000005689	-	73	68.936	ENSRNOG00000011508	Zc3h12b	76	59.712	Rattus_norvegicus
ENSACIG00000005689	-	73	70.130	ENSRBIG00000036402	ZC3H12B	67	54.989	Rhinopithecus_bieti
ENSACIG00000005689	-	73	70.130	ENSRROG00000036004	ZC3H12B	67	54.989	Rhinopithecus_roxellana
ENSACIG00000005689	-	73	70.386	ENSSHAG00000006530	ZC3H12B	87	43.350	Sarcophilus_harrisii
ENSACIG00000005689	-	73	69.198	ENSSFOG00015008769	zc3h12b	87	44.144	Scleropages_formosus
ENSACIG00000005689	-	73	71.488	ENSSFOG00015012866	ZC3H12B	86	45.689	Scleropages_formosus
ENSACIG00000005689	-	73	69.136	ENSSMAG00000018309	zc3h12b	50	57.366	Scophthalmus_maximus
ENSACIG00000005689	-	79	67.843	ENSSDUG00000014078	zc3h12b	83	70.464	Seriola_dumerili
ENSACIG00000005689	-	73	68.398	ENSSPUG00000014175	ZC3H12B	90	41.645	Sphenodon_punctatus
ENSACIG00000005689	-	73	68.936	ENSSSCG00000012367	ZC3H12B	86	41.176	Sus_scrofa
ENSACIG00000005689	-	75	66.797	ENSTGUG00000002846	ZC3H12B	91	41.818	Taeniopygia_guttata
ENSACIG00000005689	-	73	85.776	ENSTRUG00000015402	-	98	77.179	Takifugu_rubripes
ENSACIG00000005689	-	69	60.580	ENSTNIG00000015684	-	99	61.279	Tetraodon_nigroviridis
ENSACIG00000005689	-	72	40.675	ENSVPAG00000009070	ZC3H12B	84	39.474	Vicugna_pacos
ENSACIG00000005689	-	92	37.514	ENSXETG00000017794	zc3h12b	87	39.406	Xenopus_tropicalis
ENSACIG00000005689	-	77	86.420	ENSXCOG00000007996	-	87	86.420	Xiphophorus_couchianus