EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000005804 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 17864 bases
Position: chrCCOE01000455.1:738234-756097
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007455	TRM13	PF05206.14	2.9e-83	1	1
ENSACIP00000007467	TRM13	PF05206.14	4e-83	1	1
ENSACIP00000007479	zf-U11-48K	PF05253.12	3.7e-11	1	1
ENSACIP00000007455	zf-U11-48K	PF05253.12	8.1e-11	1	1
ENSACIP00000007467	zf-U11-48K	PF05253.12	1e-10	1	1
ENSACIP00000007455	zf-TRM13_CCCH	PF11722.8	6.4e-13	1	1
ENSACIP00000007467	zf-TRM13_CCCH	PF11722.8	6.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007685	-	1482	-	ENSACIP00000007467	493 (aa)	-	-
ENSACIT00000007697	-	375	-	ENSACIP00000007479	124 (aa)	-	-
ENSACIT00000007673	-	1410	-	ENSACIP00000007455	469 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005804	trmt13	99	50.758	ENSG00000122435	TRMT13	99	50.813	Homo_sapiens
ENSACIG00000005804	trmt13	95	71.959	ENSAPOG00000015131	trmt13	99	74.280	Acanthochromis_polyacanthus
ENSACIG00000005804	trmt13	97	51.042	ENSAMEG00000008917	TRMT13	96	51.042	Ailuropoda_melanoleuca
ENSACIG00000005804	trmt13	95	72.165	ENSAOCG00000023585	trmt13	99	74.486	Amphiprion_ocellaris
ENSACIG00000005804	trmt13	95	72.165	ENSAPEG00000004025	trmt13	99	74.486	Amphiprion_percula
ENSACIG00000005804	trmt13	96	72.258	ENSATEG00000006597	trmt13	97	74.242	Anabas_testudineus
ENSACIG00000005804	trmt13	86	51.878	ENSAPLG00000014924	TRMT13	98	53.864	Anas_platyrhynchos
ENSACIG00000005804	trmt13	95	52.258	ENSACAG00000003498	TRMT13	99	52.532	Anolis_carolinensis
ENSACIG00000005804	trmt13	97	51.037	ENSANAG00000019525	TRMT13	97	56.604	Aotus_nancymaae
ENSACIG00000005804	trmt13	97	78.571	ENSACLG00000020018	trmt13	99	82.353	Astatotilapia_calliptera
ENSACIG00000005804	trmt13	95	52.643	ENSAMXG00000017963	trmt13	99	53.942	Astyanax_mexicanus
ENSACIG00000005804	trmt13	97	50.722	ENSBTAG00000015781	TRMT13	97	50.722	Bos_taurus
ENSACIG00000005804	trmt13	97	50.105	ENSCJAG00000000200	TRMT13	91	63.121	Callithrix_jacchus
ENSACIG00000005804	trmt13	66	48.328	ENSCAFG00000020021	TRMT13	94	47.604	Canis_familiaris
ENSACIG00000005804	trmt13	94	49.630	ENSCAFG00020011572	TRMT13	90	58.868	Canis_lupus_dingo
ENSACIG00000005804	trmt13	97	50.518	ENSCHIG00000015395	TRMT13	97	51.464	Capra_hircus
ENSACIG00000005804	trmt13	98	53.030	ENSTSYG00000010811	TRMT13	95	62.500	Carlito_syrichta
ENSACIG00000005804	trmt13	51	85.294	ENSCAPG00000009085	TRMT13	96	42.135	Cavia_aperea
ENSACIG00000005804	trmt13	97	49.686	ENSCPOG00000000694	TRMT13	98	50.625	Cavia_porcellus
ENSACIG00000005804	trmt13	97	50.415	ENSCCAG00000023772	TRMT13	97	55.660	Cebus_capucinus
ENSACIG00000005804	trmt13	97	51.245	ENSCATG00000033556	TRMT13	99	57.407	Cercocebus_atys
ENSACIG00000005804	trmt13	88	49.420	ENSCLAG00000008220	TRMT13	98	51.529	Chinchilla_lanigera
ENSACIG00000005804	trmt13	97	51.037	ENSCSAG00000001506	TRMT13	98	51.959	Chlorocebus_sabaeus
ENSACIG00000005804	trmt13	97	51.351	ENSCPBG00000026671	TRMT13	97	52.201	Chrysemys_picta_bellii
ENSACIG00000005804	trmt13	97	51.037	ENSCANG00000034659	TRMT13	99	56.481	Colobus_angolensis_palliatus
ENSACIG00000005804	trmt13	95	50.213	ENSCGRG00001021601	Trmt13	95	51.163	Cricetulus_griseus_chok1gshd
ENSACIG00000005804	trmt13	51	46.457	ENSCGRG00000000093	-	96	46.667	Cricetulus_griseus_crigri
ENSACIG00000005804	trmt13	97	66.228	ENSCSEG00000000591	trmt13	99	68.182	Cynoglossus_semilaevis
ENSACIG00000005804	trmt13	96	67.660	ENSCVAG00000017342	trmt13	94	70.362	Cyprinodon_variegatus
ENSACIG00000005804	trmt13	95	54.605	ENSDARG00000102846	trmt13	98	55.603	Danio_rerio
ENSACIG00000005804	trmt13	94	48.921	ENSDNOG00000001710	TRMT13	85	56.140	Dasypus_novemcinctus
ENSACIG00000005804	trmt13	95	50.213	ENSDORG00000015808	Trmt13	96	51.153	Dipodomys_ordii
ENSACIG00000005804	trmt13	96	33.404	FBgn0037435	CG18048	98	33.402	Drosophila_melanogaster
ENSACIG00000005804	trmt13	96	45.021	ENSETEG00000005819	TRMT13	96	46.316	Echinops_telfairi
ENSACIG00000005804	trmt13	94	44.658	ENSEBUG00000014444	trmt13	97	46.154	Eptatretus_burgeri
ENSACIG00000005804	trmt13	97	49.792	ENSEASG00005015918	TRMT13	95	51.380	Equus_asinus_asinus
ENSACIG00000005804	trmt13	97	50.417	ENSECAG00000022626	TRMT13	95	52.017	Equus_caballus
ENSACIG00000005804	trmt13	94	46.667	ENSEEUG00000000294	TRMT13	71	51.852	Erinaceus_europaeus
ENSACIG00000005804	trmt13	95	55.724	ENSELUG00000003803	trmt13	99	55.319	Esox_lucius
ENSACIG00000005804	trmt13	99	50.758	ENSFCAG00000030618	TRMT13	100	54.128	Felis_catus
ENSACIG00000005804	trmt13	96	51.915	ENSFALG00000002424	TRMT13	97	53.715	Ficedula_albicollis
ENSACIG00000005804	trmt13	96	49.482	ENSFDAG00000006342	TRMT13	98	50.309	Fukomys_damarensis
ENSACIG00000005804	trmt13	94	61.905	ENSFHEG00000022954	trmt13	100	71.220	Fundulus_heteroclitus
ENSACIG00000005804	trmt13	94	54.098	ENSGMOG00000013223	trmt13	100	54.425	Gadus_morhua
ENSACIG00000005804	trmt13	96	51.073	ENSGALG00000005290	TRMT13	96	53.433	Gallus_gallus
ENSACIG00000005804	trmt13	94	57.692	ENSGAFG00000001577	trmt13	86	64.885	Gambusia_affinis
ENSACIG00000005804	trmt13	94	72.786	ENSGACG00000013428	trmt13	99	73.866	Gasterosteus_aculeatus
ENSACIG00000005804	trmt13	97	51.452	ENSGAGG00000023303	TRMT13	97	58.029	Gopherus_agassizii
ENSACIG00000005804	trmt13	98	50.610	ENSGGOG00000005616	TRMT13	99	50.610	Gorilla_gorilla
ENSACIG00000005804	trmt13	97	79.437	ENSHBUG00000007754	trmt13	99	83.224	Haplochromis_burtoni
ENSACIG00000005804	trmt13	96	49.585	ENSHGLG00000002164	TRMT13	97	50.622	Heterocephalus_glaber_female
ENSACIG00000005804	trmt13	96	49.585	ENSHGLG00100001618	TRMT13	97	50.622	Heterocephalus_glaber_male
ENSACIG00000005804	trmt13	95	52.876	ENSHCOG00000020553	trmt13	99	54.762	Hippocampus_comes
ENSACIG00000005804	trmt13	95	55.411	ENSIPUG00000024787	trmt13	99	56.503	Ictalurus_punctatus
ENSACIG00000005804	trmt13	95	49.362	ENSSTOG00000013483	TRMT13	99	49.284	Ictidomys_tridecemlineatus
ENSACIG00000005804	trmt13	97	49.167	ENSJJAG00000018012	Trmt13	98	49.793	Jaculus_jaculus
ENSACIG00000005804	trmt13	68	69.688	ENSKMAG00000007639	trmt13	88	72.664	Kryptolebias_marmoratus
ENSACIG00000005804	trmt13	96	67.880	ENSLBEG00000020238	trmt13	99	70.323	Labrus_bergylta
ENSACIG00000005804	trmt13	95	52.361	ENSLACG00000013153	TRMT13	99	51.613	Latimeria_chalumnae
ENSACIG00000005804	trmt13	96	54.158	ENSLOCG00000000418	trmt13	100	55.000	Lepisosteus_oculatus
ENSACIG00000005804	trmt13	78	50.131	ENSLAFG00000002383	TRMT13	97	50.532	Loxodonta_africana
ENSACIG00000005804	trmt13	97	51.452	ENSMFAG00000034681	TRMT13	99	56.481	Macaca_fascicularis
ENSACIG00000005804	trmt13	97	51.452	ENSMMUG00000004243	TRMT13	99	56.481	Macaca_mulatta
ENSACIG00000005804	trmt13	97	51.452	ENSMNEG00000036102	TRMT13	99	56.481	Macaca_nemestrina
ENSACIG00000005804	trmt13	97	51.037	ENSMLEG00000034258	TRMT13	97	57.547	Mandrillus_leucophaeus
ENSACIG00000005804	trmt13	97	74.781	ENSMAMG00000016597	trmt13	98	74.781	Mastacembelus_armatus
ENSACIG00000005804	trmt13	97	78.355	ENSMZEG00005020959	trmt13	99	82.135	Maylandia_zebra
ENSACIG00000005804	trmt13	86	53.286	ENSMGAG00000006970	TRMT13	98	54.779	Meleagris_gallopavo
ENSACIG00000005804	trmt13	95	50.212	ENSMAUG00000010448	Trmt13	98	50.826	Mesocricetus_auratus
ENSACIG00000005804	trmt13	99	50.000	ENSMICG00000005283	TRMT13	99	57.407	Microcebus_murinus
ENSACIG00000005804	trmt13	95	50.851	ENSMOCG00000019914	Trmt13	98	51.240	Microtus_ochrogaster
ENSACIG00000005804	trmt13	94	47.244	ENSMMOG00000007762	trmt13	90	67.692	Mola_mola
ENSACIG00000005804	trmt13	97	49.897	ENSMODG00000003646	TRMT13	96	51.255	Monodelphis_domestica
ENSACIG00000005804	trmt13	97	69.451	ENSMALG00000020965	trmt13	97	72.368	Monopterus_albus
ENSACIG00000005804	trmt13	100	46.853	MGP_CAROLIEiJ_G0025568	Trmt13	98	55.495	Mus_caroli
ENSACIG00000005804	trmt13	100	46.853	ENSMUSG00000033439	Trmt13	98	55.495	Mus_musculus
ENSACIG00000005804	trmt13	100	47.552	MGP_PahariEiJ_G0027014	Trmt13	95	55.689	Mus_pahari
ENSACIG00000005804	trmt13	100	46.853	MGP_SPRETEiJ_G0026518	Trmt13	98	55.495	Mus_spretus
ENSACIG00000005804	trmt13	78	51.070	ENSMPUG00000002078	-	96	50.541	Mustela_putorius_furo
ENSACIG00000005804	trmt13	95	50.719	ENSMLUG00000002124	TRMT13	99	50.719	Myotis_lucifugus
ENSACIG00000005804	trmt13	97	74.229	ENSNBRG00000006783	trmt13	98	77.391	Neolamprologus_brichardi
ENSACIG00000005804	trmt13	98	50.610	ENSNLEG00000035917	TRMT13	99	50.610	Nomascus_leucogenys
ENSACIG00000005804	trmt13	94	33.824	ENSMEUG00000013346	-	94	48.750	Notamacropus_eugenii
ENSACIG00000005804	trmt13	94	47.407	ENSOPRG00000012048	TRMT13	54	58.113	Ochotona_princeps
ENSACIG00000005804	trmt13	100	48.252	ENSODEG00000006075	-	88	57.792	Octodon_degus
ENSACIG00000005804	trmt13	93	83.007	ENSONIG00000004574	trmt13	99	83.007	Oreochromis_niloticus
ENSACIG00000005804	trmt13	87	50.801	ENSOANG00000012057	TRMT13	97	52.283	Ornithorhynchus_anatinus
ENSACIG00000005804	trmt13	96	50.000	ENSOCUG00000023095	TRMT13	95	51.380	Oryctolagus_cuniculus
ENSACIG00000005804	trmt13	96	65.870	ENSORLG00000003320	trmt13	99	66.594	Oryzias_latipes
ENSACIG00000005804	trmt13	96	65.502	ENSORLG00020005972	trmt13	98	66.886	Oryzias_latipes_hni
ENSACIG00000005804	trmt13	96	69.717	ENSORLG00015002270	trmt13	99	71.522	Oryzias_latipes_hsok
ENSACIG00000005804	trmt13	98	69.379	ENSOMEG00000006724	trmt13	95	71.490	Oryzias_melastigma
ENSACIG00000005804	trmt13	96	50.734	ENSOGAG00000005618	TRMT13	93	51.789	Otolemur_garnettii
ENSACIG00000005804	trmt13	97	50.518	ENSOARG00000017983	TRMT13	97	51.464	Ovis_aries
ENSACIG00000005804	trmt13	98	50.407	ENSPPAG00000043736	TRMT13	99	50.407	Pan_paniscus
ENSACIG00000005804	trmt13	99	50.758	ENSPPRG00000003424	TRMT13	100	54.128	Panthera_pardus
ENSACIG00000005804	trmt13	99	50.758	ENSPTIG00000018598	TRMT13	100	54.128	Panthera_tigris_altaica
ENSACIG00000005804	trmt13	98	50.203	ENSPTRG00000001001	TRMT13	99	50.203	Pan_troglodytes
ENSACIG00000005804	trmt13	97	51.037	ENSPANG00000007598	TRMT13	99	56.481	Papio_anubis
ENSACIG00000005804	trmt13	94	55.727	ENSPKIG00000001514	trmt13	97	55.824	Paramormyrops_kingsleyae
ENSACIG00000005804	trmt13	94	47.794	ENSPSIG00000012703	TRMT13	99	51.869	Pelodiscus_sinensis
ENSACIG00000005804	trmt13	98	59.698	ENSPMGG00000013298	trmt13	96	61.588	Periophthalmus_magnuspinnatus
ENSACIG00000005804	trmt13	95	51.702	ENSPEMG00000000275	Trmt13	98	51.240	Peromyscus_maniculatus_bairdii
ENSACIG00000005804	trmt13	95	46.570	ENSPMAG00000000823	trmt13	98	46.570	Petromyzon_marinus
ENSACIG00000005804	trmt13	97	50.000	ENSPCIG00000007699	TRMT13	98	50.625	Phascolarctos_cinereus
ENSACIG00000005804	trmt13	98	63.771	ENSPFOG00000008675	trmt13	98	62.316	Poecilia_formosa
ENSACIG00000005804	trmt13	95	63.557	ENSPLAG00000009709	trmt13	99	64.719	Poecilia_latipinna
ENSACIG00000005804	trmt13	96	64.363	ENSPMEG00000022954	trmt13	99	65.727	Poecilia_mexicana
ENSACIG00000005804	trmt13	94	58.209	ENSPREG00000005645	trmt13	95	65.845	Poecilia_reticulata
ENSACIG00000005804	trmt13	97	50.719	ENSPPYG00000001120	TRMT13	98	50.719	Pongo_abelii
ENSACIG00000005804	trmt13	97	50.731	ENSPCAG00000002340	TRMT13	95	52.128	Procavia_capensis
ENSACIG00000005804	trmt13	98	49.796	ENSPCOG00000017984	TRMT13	88	59.375	Propithecus_coquereli
ENSACIG00000005804	trmt13	97	50.208	ENSPVAG00000017430	TRMT13	95	51.380	Pteropus_vampyrus
ENSACIG00000005804	trmt13	97	80.837	ENSPNYG00000013690	trmt13	100	80.396	Pundamilia_nyererei
ENSACIG00000005804	trmt13	95	54.230	ENSPNAG00000022130	trmt13	100	54.832	Pygocentrus_nattereri
ENSACIG00000005804	trmt13	95	50.422	ENSRNOG00000015140	Trmt13	94	50.826	Rattus_norvegicus
ENSACIG00000005804	trmt13	97	51.037	ENSRBIG00000037686	TRMT13	99	56.481	Rhinopithecus_bieti
ENSACIG00000005804	trmt13	94	58.621	ENSRROG00000044057	TRMT13	99	56.481	Rhinopithecus_roxellana
ENSACIG00000005804	trmt13	97	50.625	ENSSBOG00000026541	TRMT13	97	56.604	Saimiri_boliviensis_boliviensis
ENSACIG00000005804	trmt13	90	50.667	ENSSHAG00000005213	TRMT13	95	52.381	Sarcophilus_harrisii
ENSACIG00000005804	trmt13	95	55.531	ENSSFOG00015017560	trmt13	98	56.448	Scleropages_formosus
ENSACIG00000005804	trmt13	95	71.338	ENSSMAG00000014592	trmt13	98	71.338	Scophthalmus_maximus
ENSACIG00000005804	trmt13	94	74.947	ENSSDUG00000015508	trmt13	97	74.947	Seriola_dumerili
ENSACIG00000005804	trmt13	95	75.262	ENSSLDG00000019060	trmt13	98	75.262	Seriola_lalandi_dorsalis
ENSACIG00000005804	trmt13	94	50.370	ENSSARG00000010344	TRMT13	96	47.505	Sorex_araneus
ENSACIG00000005804	trmt13	95	50.214	ENSSPUG00000016339	TRMT13	98	51.844	Sphenodon_punctatus
ENSACIG00000005804	trmt13	94	77.902	ENSSPAG00000011922	trmt13	98	79.167	Stegastes_partitus
ENSACIG00000005804	trmt13	94	58.621	ENSSSCG00000006869	TRMT13	97	51.695	Sus_scrofa
ENSACIG00000005804	trmt13	96	51.717	ENSTGUG00000005253	TRMT13	99	53.503	Taeniopygia_guttata
ENSACIG00000005804	trmt13	95	62.851	ENSTRUG00000008400	trmt13	99	63.291	Takifugu_rubripes
ENSACIG00000005804	trmt13	70	50.610	ENSTBEG00000008911	TRMT13	84	53.659	Tupaia_belangeri
ENSACIG00000005804	trmt13	94	54.237	ENSUAMG00000017251	TRMT13	95	50.959	Ursus_americanus
ENSACIG00000005804	trmt13	97	50.833	ENSUMAG00000007901	TRMT13	98	51.598	Ursus_maritimus
ENSACIG00000005804	trmt13	73	84.848	ENSVPAG00000001034	TRMT13	81	84.848	Vicugna_pacos
ENSACIG00000005804	trmt13	97	50.000	ENSVVUG00000021996	TRMT13	97	50.932	Vulpes_vulpes
ENSACIG00000005804	trmt13	96	50.540	ENSXETG00000013204	trmt13	98	49.892	Xenopus_tropicalis
ENSACIG00000005804	trmt13	95	63.557	ENSXMAG00000010765	trmt13	99	64.502	Xiphophorus_maculatus