EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000005871 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4939 bases
Position: chrCCOE01001201.1:124220-129158
Accession: ZDB-GENE-060825-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007514	RRM_1	PF00076.22	8.6e-27	1	2
ENSACIP00000007514	RRM_1	PF00076.22	8.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000007733	-	1140	-	ENSACIP00000007514	379 (aa)	-	-

Gene Model

Click here to download ENSACIG00000005871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000005871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000005871	grsf1	78	42.683	ENSACIG00000008964	hnrnph1	85	43.902
ENSACIG00000005871	grsf1	78	60.526	ENSACIG00000007244	hnrnph3	68	60.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000005871	grsf1	100	72.070	ENSAPOG00000012487	grsf1	100	71.250	Acanthochromis_polyacanthus
ENSACIG00000005871	grsf1	100	72.932	ENSAOCG00000017462	-	100	72.932	Amphiprion_ocellaris
ENSACIG00000005871	grsf1	100	72.500	ENSAPEG00000007240	-	100	72.500	Amphiprion_percula
ENSACIG00000005871	grsf1	99	68.974	ENSATEG00000007185	grsf1	99	68.718	Anabas_testudineus
ENSACIG00000005871	grsf1	100	81.000	ENSACLG00000003685	-	100	81.000	Astatotilapia_calliptera
ENSACIG00000005871	grsf1	86	53.094	ENSAMXG00000012270	grsf1	98	51.780	Astyanax_mexicanus
ENSACIG00000005871	grsf1	99	65.455	ENSCSEG00000019209	-	93	65.455	Cynoglossus_semilaevis
ENSACIG00000005871	grsf1	99	67.277	ENSCVAG00000004476	grsf1	100	66.754	Cyprinodon_variegatus
ENSACIG00000005871	grsf1	98	47.396	ENSDARG00000053021	grsf1	94	47.396	Danio_rerio
ENSACIG00000005871	grsf1	99	50.124	ENSFHEG00000013358	-	99	50.124	Fundulus_heteroclitus
ENSACIG00000005871	grsf1	76	54.545	ENSGMOG00000014047	grsf1	80	69.091	Gadus_morhua
ENSACIG00000005871	grsf1	99	62.594	ENSGAFG00000004496	grsf1	99	61.845	Gambusia_affinis
ENSACIG00000005871	grsf1	77	63.354	ENSGACG00000014447	grsf1	97	62.733	Gasterosteus_aculeatus
ENSACIG00000005871	grsf1	100	80.702	ENSHBUG00000006284	grsf1	99	80.702	Haplochromis_burtoni
ENSACIG00000005871	grsf1	99	57.250	ENSHCOG00000007715	-	99	57.250	Hippocampus_comes
ENSACIG00000005871	grsf1	83	54.890	ENSIPUG00000010533	grsf1	81	54.574	Ictalurus_punctatus
ENSACIG00000005871	grsf1	97	57.488	ENSKMAG00000004528	grsf1	100	57.007	Kryptolebias_marmoratus
ENSACIG00000005871	grsf1	78	55.987	ENSLBEG00000018100	grsf1	98	55.987	Labrus_bergylta
ENSACIG00000005871	grsf1	98	67.830	ENSMAMG00000002627	grsf1	99	66.250	Mastacembelus_armatus
ENSACIG00000005871	grsf1	100	81.000	ENSMZEG00005020633	-	100	81.000	Maylandia_zebra
ENSACIG00000005871	grsf1	94	70.752	ENSMMOG00000014231	grsf1	98	69.459	Mola_mola
ENSACIG00000005871	grsf1	98	66.256	ENSMALG00000000251	grsf1	99	65.271	Monopterus_albus
ENSACIG00000005871	grsf1	98	80.153	ENSNBRG00000017774	grsf1	96	80.153	Neolamprologus_brichardi
ENSACIG00000005871	grsf1	100	82.500	ENSONIG00000014119	grsf1	100	82.500	Oreochromis_niloticus
ENSACIG00000005871	grsf1	99	62.532	ENSORLG00000030211	grsf1	99	62.435	Oryzias_latipes
ENSACIG00000005871	grsf1	99	63.472	ENSORLG00020014383	grsf1	99	63.351	Oryzias_latipes_hni
ENSACIG00000005871	grsf1	99	62.821	ENSORLG00015006520	grsf1	99	62.953	Oryzias_latipes_hsok
ENSACIG00000005871	grsf1	88	67.241	ENSOMEG00000009181	grsf1	99	63.212	Oryzias_melastigma
ENSACIG00000005871	grsf1	81	58.675	ENSPKIG00000019432	grsf1	77	57.453	Paramormyrops_kingsleyae
ENSACIG00000005871	grsf1	83	67.463	ENSPMGG00000013654	grsf1	92	66.866	Periophthalmus_magnuspinnatus
ENSACIG00000005871	grsf1	99	62.347	ENSPFOG00000006122	grsf1	99	61.858	Poecilia_formosa
ENSACIG00000005871	grsf1	99	62.469	ENSPLAG00000020977	grsf1	99	62.469	Poecilia_latipinna
ENSACIG00000005871	grsf1	99	62.836	ENSPMEG00000012485	grsf1	99	62.347	Poecilia_mexicana
ENSACIG00000005871	grsf1	99	61.765	ENSPREG00000013383	grsf1	99	61.520	Poecilia_reticulata
ENSACIG00000005871	grsf1	100	80.750	ENSPNYG00000005379	grsf1	100	80.000	Pundamilia_nyererei
ENSACIG00000005871	grsf1	84	59.248	ENSPNAG00000014912	grsf1	79	59.502	Pygocentrus_nattereri
ENSACIG00000005871	grsf1	90	45.087	ENSSFOG00015014620	grsf1	85	45.294	Scleropages_formosus
ENSACIG00000005871	grsf1	83	66.044	ENSSMAG00000014181	grsf1	88	66.044	Scophthalmus_maximus
ENSACIG00000005871	grsf1	100	68.814	ENSSDUG00000009397	-	95	75.503	Seriola_dumerili
ENSACIG00000005871	grsf1	100	70.543	ENSSLDG00000025494	grsf1	100	70.026	Seriola_lalandi_dorsalis
ENSACIG00000005871	grsf1	99	65.152	ENSSPAG00000023296	grsf1	99	65.152	Stegastes_partitus
ENSACIG00000005871	grsf1	96	61.867	ENSTRUG00000015354	grsf1	99	61.757	Takifugu_rubripes
ENSACIG00000005871	grsf1	81	66.327	ENSTNIG00000015350	-	96	66.894	Tetraodon_nigroviridis
ENSACIG00000005871	grsf1	99	62.095	ENSXMAG00000029710	grsf1	99	61.347	Xiphophorus_maculatus