EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000006247 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 7973 bases
Position: chrCCOE01000100.1:239764-247736
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008073	RRM_5	PF13893.6	1.2e-06	1	1
ENSACIP00000008047	RRM_5	PF13893.6	1.4e-06	1	1
ENSACIP00000008073	RRM_1	PF00076.22	1e-13	1	1
ENSACIP00000008047	RRM_1	PF00076.22	1e-13	1	1
ENSACIP00000008047	SAP	PF02037.27	3.1e-09	1	1
ENSACIP00000008073	SAP	PF02037.27	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008285	-	2304	-	ENSACIP00000008047	767 (aa)	-	-
ENSACIT00000008313	-	2271	-	ENSACIP00000008073	756 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006247	safb	95	43.523	ENSG00000160633	SAFB	94	40.112	Homo_sapiens
ENSACIG00000006247	safb	100	75.971	ENSAPOG00000022508	safb	98	78.034	Acanthochromis_polyacanthus
ENSACIG00000006247	safb	73	42.265	ENSAMEG00000012254	SAFB	98	38.950	Ailuropoda_melanoleuca
ENSACIG00000006247	safb	100	75.734	ENSAOCG00000006308	safb	98	76.117	Amphiprion_ocellaris
ENSACIG00000006247	safb	100	75.120	ENSAPEG00000023342	safb	100	75.239	Amphiprion_percula
ENSACIG00000006247	safb	100	77.592	ENSATEG00000004998	safb	100	76.794	Anabas_testudineus
ENSACIG00000006247	safb	65	44.640	ENSAPLG00000006355	-	99	47.387	Anas_platyrhynchos
ENSACIG00000006247	safb	93	41.570	ENSAPLG00000005780	-	97	43.743	Anas_platyrhynchos
ENSACIG00000006247	safb	95	44.855	ENSANAG00000028821	SAFB	94	41.023	Aotus_nancymaae
ENSACIG00000006247	safb	100	85.912	ENSACLG00000001926	safb	100	84.994	Astatotilapia_calliptera
ENSACIG00000006247	safb	98	58.499	ENSAMXG00000018154	safb	100	59.200	Astyanax_mexicanus
ENSACIG00000006247	safb	99	40.045	ENSBTAG00000007875	SAFB	95	39.359	Bos_taurus
ENSACIG00000006247	safb	54	53.498	ENSCJAG00000017081	SAFB	93	45.709	Callithrix_jacchus
ENSACIG00000006247	safb	73	42.743	ENSCAFG00000018803	SAFB	84	39.430	Canis_familiaris
ENSACIG00000006247	safb	73	42.743	ENSCAFG00020018943	SAFB	97	39.430	Canis_lupus_dingo
ENSACIG00000006247	safb	99	40.247	ENSCHIG00000007262	SAFB	95	39.274	Capra_hircus
ENSACIG00000006247	safb	95	44.444	ENSCCAG00000020193	SAFB	94	40.795	Cebus_capucinus
ENSACIG00000006247	safb	95	43.543	ENSCATG00000029994	SAFB	94	40.270	Cercocebus_atys
ENSACIG00000006247	safb	70	43.360	ENSCLAG00000007734	SAFB	94	42.040	Chinchilla_lanigera
ENSACIG00000006247	safb	95	43.543	ENSCSAG00000009949	SAFB	94	40.270	Chlorocebus_sabaeus
ENSACIG00000006247	safb	71	54.545	ENSCHOG00000003208	SAFB	87	36.268	Choloepus_hoffmanni
ENSACIG00000006247	safb	92	43.468	ENSCPBG00000010928	-	96	43.081	Chrysemys_picta_bellii
ENSACIG00000006247	safb	93	42.494	ENSCPBG00000010936	-	97	43.778	Chrysemys_picta_bellii
ENSACIG00000006247	safb	96	38.471	ENSCANG00000004774	-	74	54.217	Colobus_angolensis_palliatus
ENSACIG00000006247	safb	99	42.459	ENSCANG00000019754	-	89	41.697	Colobus_angolensis_palliatus
ENSACIG00000006247	safb	52	53.333	ENSCGRG00001002254	Safb	94	39.068	Cricetulus_griseus_chok1gshd
ENSACIG00000006247	safb	100	73.506	ENSCSEG00000019870	safb	99	73.506	Cynoglossus_semilaevis
ENSACIG00000006247	safb	100	66.583	ENSCVAG00000002226	safb	100	65.272	Cyprinodon_variegatus
ENSACIG00000006247	safb	96	57.330	ENSDARG00000020467	safb	98	57.491	Danio_rerio
ENSACIG00000006247	safb	98	43.458	ENSDNOG00000015746	SAFB	96	39.193	Dasypus_novemcinctus
ENSACIG00000006247	safb	70	41.519	ENSDORG00000016200	Safb	91	39.125	Dipodomys_ordii
ENSACIG00000006247	safb	70	39.864	ENSEASG00005023019	SAFB	97	39.957	Equus_asinus_asinus
ENSACIG00000006247	safb	99	60.727	ENSELUG00000022327	safb	99	60.329	Esox_lucius
ENSACIG00000006247	safb	73	41.864	ENSFCAG00000011835	SAFB	97	38.478	Felis_catus
ENSACIG00000006247	safb	98	43.522	ENSFALG00000013882	-	87	43.996	Ficedula_albicollis
ENSACIG00000006247	safb	95	37.709	ENSFDAG00000020306	SAFB	74	41.857	Fukomys_damarensis
ENSACIG00000006247	safb	100	69.308	ENSFHEG00000004219	safb	100	68.222	Fundulus_heteroclitus
ENSACIG00000006247	safb	100	65.783	ENSGMOG00000014280	safb	100	66.265	Gadus_morhua
ENSACIG00000006247	safb	70	42.924	ENSGALG00000001948	-	94	45.851	Gallus_gallus
ENSACIG00000006247	safb	99	44.801	ENSGALG00000013365	-	94	44.921	Gallus_gallus
ENSACIG00000006247	safb	100	66.426	ENSGAFG00000016162	safb	100	64.927	Gambusia_affinis
ENSACIG00000006247	safb	100	71.108	ENSGACG00000011385	safb	100	70.178	Gasterosteus_aculeatus
ENSACIG00000006247	safb	68	53.460	ENSGAGG00000017702	-	83	56.121	Gopherus_agassizii
ENSACIG00000006247	safb	97	45.593	ENSGAGG00000008424	-	97	46.028	Gopherus_agassizii
ENSACIG00000006247	safb	95	43.636	ENSGGOG00000015109	SAFB	94	40.387	Gorilla_gorilla
ENSACIG00000006247	safb	100	87.037	ENSHBUG00000009218	safb	98	87.037	Haplochromis_burtoni
ENSACIG00000006247	safb	70	41.951	ENSHGLG00000015883	SAFB	94	39.576	Heterocephalus_glaber_female
ENSACIG00000006247	safb	99	37.084	ENSHGLG00100004228	SAFB	70	42.419	Heterocephalus_glaber_male
ENSACIG00000006247	safb	95	61.628	ENSHCOG00000001705	safb	99	63.001	Hippocampus_comes
ENSACIG00000006247	safb	100	59.145	ENSIPUG00000024869	safb2	99	60.427	Ictalurus_punctatus
ENSACIG00000006247	safb	65	39.661	ENSSTOG00000002783	SAFB	96	38.061	Ictidomys_tridecemlineatus
ENSACIG00000006247	safb	100	71.140	ENSKMAG00000022308	safb	100	71.566	Kryptolebias_marmoratus
ENSACIG00000006247	safb	100	71.783	ENSLBEG00000006015	safb	100	71.311	Labrus_bergylta
ENSACIG00000006247	safb	70	43.115	ENSLACG00000018090	SAFB	97	48.136	Latimeria_chalumnae
ENSACIG00000006247	safb	98	60.000	ENSLOCG00000003613	safb	99	59.375	Lepisosteus_oculatus
ENSACIG00000006247	safb	99	41.620	ENSLAFG00000003840	SAFB	97	40.944	Loxodonta_africana
ENSACIG00000006247	safb	95	43.493	ENSMFAG00000003885	SAFB	94	40.337	Macaca_fascicularis
ENSACIG00000006247	safb	95	45.052	ENSMMUG00000017970	SAFB	94	40.501	Macaca_mulatta
ENSACIG00000006247	safb	95	42.627	ENSMNEG00000035637	SAFB	94	40.069	Macaca_nemestrina
ENSACIG00000006247	safb	95	40.389	ENSMLEG00000038637	SAFB	94	39.612	Mandrillus_leucophaeus
ENSACIG00000006247	safb	100	76.364	ENSMAMG00000003357	safb	90	77.576	Mastacembelus_armatus
ENSACIG00000006247	safb	100	86.038	ENSMZEG00005009120	safb	100	85.120	Maylandia_zebra
ENSACIG00000006247	safb	79	57.471	ENSMGAG00000001051	-	96	47.239	Meleagris_gallopavo
ENSACIG00000006247	safb	97	43.547	ENSMGAG00000001101	-	97	43.166	Meleagris_gallopavo
ENSACIG00000006247	safb	72	43.366	ENSMICG00000008739	-	94	41.090	Microcebus_murinus
ENSACIG00000006247	safb	89	38.120	ENSMICG00000046795	-	94	39.193	Microcebus_murinus
ENSACIG00000006247	safb	94	42.825	ENSMODG00000001236	SAFB	94	39.956	Monodelphis_domestica
ENSACIG00000006247	safb	100	75.296	ENSMALG00000020330	safb	100	74.232	Monopterus_albus
ENSACIG00000006247	safb	52	53.782	MGP_CAROLIEiJ_G0021780	Safb	94	39.203	Mus_caroli
ENSACIG00000006247	safb	52	53.782	ENSMUSG00000071054	Safb	94	39.756	Mus_musculus
ENSACIG00000006247	safb	51	53.782	MGP_PahariEiJ_G0020769	Safb	94	38.573	Mus_pahari
ENSACIG00000006247	safb	73	42.584	ENSMPUG00000006123	SAFB	91	39.454	Mustela_putorius_furo
ENSACIG00000006247	safb	98	43.645	ENSMLUG00000001081	SAFB	92	40.231	Myotis_lucifugus
ENSACIG00000006247	safb	52	49.521	ENSNGAG00000019882	Safb	94	39.731	Nannospalax_galili
ENSACIG00000006247	safb	94	44.431	ENSNLEG00000013551	SAFB	94	42.449	Nomascus_leucogenys
ENSACIG00000006247	safb	65	40.455	ENSOPRG00000011561	-	99	38.313	Ochotona_princeps
ENSACIG00000006247	safb	70	42.697	ENSODEG00000014838	SAFB	94	39.462	Octodon_degus
ENSACIG00000006247	safb	100	81.548	ENSONIG00000002318	safb	98	83.577	Oreochromis_niloticus
ENSACIG00000006247	safb	89	38.224	ENSOCUG00000014628	SAFB	88	41.006	Oryctolagus_cuniculus
ENSACIG00000006247	safb	98	70.260	ENSORLG00000016989	safb	100	70.012	Oryzias_latipes
ENSACIG00000006247	safb	98	72.207	ENSORLG00020000404	safb	98	72.114	Oryzias_latipes_hni
ENSACIG00000006247	safb	98	70.756	ENSORLG00015010733	safb	100	70.545	Oryzias_latipes_hsok
ENSACIG00000006247	safb	100	70.182	ENSOMEG00000009066	safb	100	69.613	Oryzias_melastigma
ENSACIG00000006247	safb	70	43.615	ENSOGAG00000027769	SAFB	94	40.888	Otolemur_garnettii
ENSACIG00000006247	safb	99	37.556	ENSOARG00000007662	-	95	37.457	Ovis_aries
ENSACIG00000006247	safb	80	38.652	ENSOARG00000007856	-	100	37.655	Ovis_aries
ENSACIG00000006247	safb	95	43.473	ENSPPAG00000035129	SAFB	94	40.112	Pan_paniscus
ENSACIG00000006247	safb	73	41.864	ENSPPRG00000017197	SAFB	97	38.478	Panthera_pardus
ENSACIG00000006247	safb	95	43.473	ENSPTRG00000010335	SAFB	94	40.112	Pan_troglodytes
ENSACIG00000006247	safb	95	43.493	ENSPANG00000007770	SAFB	94	40.337	Papio_anubis
ENSACIG00000006247	safb	99	59.818	ENSPKIG00000009902	safb	99	58.570	Paramormyrops_kingsleyae
ENSACIG00000006247	safb	99	44.143	ENSPSIG00000011679	-	97	46.355	Pelodiscus_sinensis
ENSACIG00000006247	safb	99	43.804	ENSPSIG00000009367	-	91	45.896	Pelodiscus_sinensis
ENSACIG00000006247	safb	59	50.962	ENSPCIG00000009504	-	95	50.749	Phascolarctos_cinereus
ENSACIG00000006247	safb	100	68.335	ENSPFOG00000007745	safb	100	67.291	Poecilia_formosa
ENSACIG00000006247	safb	100	65.793	ENSPLAG00000001614	safb	100	64.784	Poecilia_latipinna
ENSACIG00000006247	safb	100	69.048	ENSPMEG00000021023	safb	100	67.291	Poecilia_mexicana
ENSACIG00000006247	safb	100	66.707	ENSPREG00000012496	safb	100	66.049	Poecilia_reticulata
ENSACIG00000006247	safb	95	43.508	ENSPPYG00000009428	SAFB	94	40.022	Pongo_abelii
ENSACIG00000006247	safb	91	40.508	ENSPCAG00000006475	SAFB	94	37.045	Procavia_capensis
ENSACIG00000006247	safb	99	39.174	ENSPCOG00000014090	SAFB	94	39.086	Propithecus_coquereli
ENSACIG00000006247	safb	80	54.464	ENSPVAG00000004913	SAFB	78	54.464	Pteropus_vampyrus
ENSACIG00000006247	safb	100	58.824	ENSPNAG00000021838	safb	99	59.740	Pygocentrus_nattereri
ENSACIG00000006247	safb	95	43.645	ENSRBIG00000042509	SAFB	93	39.440	Rhinopithecus_bieti
ENSACIG00000006247	safb	95	43.607	ENSRROG00000029278	SAFB	94	40.449	Rhinopithecus_roxellana
ENSACIG00000006247	safb	95	44.114	ENSSBOG00000026291	SAFB	94	40.452	Saimiri_boliviensis_boliviensis
ENSACIG00000006247	safb	100	57.719	ENSSFOG00015008156	safb	99	58.851	Scleropages_formosus
ENSACIG00000006247	safb	100	75.121	ENSSMAG00000009316	safb	100	75.627	Scophthalmus_maximus
ENSACIG00000006247	safb	100	83.377	ENSSDUG00000009652	safb	98	83.377	Seriola_dumerili
ENSACIG00000006247	safb	100	76.905	ENSSLDG00000001670	safb	100	76.014	Seriola_lalandi_dorsalis
ENSACIG00000006247	safb	65	40.806	ENSSARG00000010475	SAFB	96	38.462	Sorex_araneus
ENSACIG00000006247	safb	58	42.801	ENSSPUG00000009747	-	98	40.308	Sphenodon_punctatus
ENSACIG00000006247	safb	56	42.910	ENSSPUG00000009820	-	94	44.968	Sphenodon_punctatus
ENSACIG00000006247	safb	100	78.710	ENSSPAG00000015682	safb	98	78.839	Stegastes_partitus
ENSACIG00000006247	safb	99	38.970	ENSSSCG00000013522	SAFB	96	42.243	Sus_scrofa
ENSACIG00000006247	safb	94	44.331	ENSTGUG00000000502	-	97	43.800	Taeniopygia_guttata
ENSACIG00000006247	safb	70	43.942	ENSTGUG00000000489	-	96	48.474	Taeniopygia_guttata
ENSACIG00000006247	safb	100	72.162	ENSTRUG00000003567	safb	100	72.014	Takifugu_rubripes
ENSACIG00000006247	safb	80	73.973	ENSTNIG00000015470	safb	100	60.723	Tetraodon_nigroviridis
ENSACIG00000006247	safb	80	75.000	ENSTTRG00000013588	SAFB	79	75.000	Tursiops_truncatus
ENSACIG00000006247	safb	79	42.434	ENSUMAG00000009734	SAFB	85	42.379	Ursus_maritimus
ENSACIG00000006247	safb	73	43.381	ENSVVUG00000013720	SAFB	84	39.891	Vulpes_vulpes
ENSACIG00000006247	safb	51	71.014	ENSXETG00000008755	safb	79	71.014	Xenopus_tropicalis
ENSACIG00000006247	safb	100	69.298	ENSXMAG00000003458	safb	100	67.416	Xiphophorus_maculatus