EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000006251 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 19395 bases
Position: chrCCOE01000019.1:230434-249828
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000007992	RRM_1	PF00076.22	3.5e-05	1	1
ENSACIP00000007992	G-patch	PF01585.23	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008229	-	1218	-	ENSACIP00000007992	405 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006251	rbm17	100	78.922	ENSG00000134453	RBM17	100	78.922	Homo_sapiens
ENSACIG00000006251	rbm17	99	94.015	ENSAPOG00000007101	rbm17	99	94.015	Acanthochromis_polyacanthus
ENSACIG00000006251	rbm17	100	79.167	ENSAMEG00000002107	RBM17	100	79.167	Ailuropoda_melanoleuca
ENSACIG00000006251	rbm17	100	93.827	ENSAOCG00000014892	rbm17	100	93.827	Amphiprion_ocellaris
ENSACIG00000006251	rbm17	100	93.827	ENSAPEG00000022779	rbm17	100	93.827	Amphiprion_percula
ENSACIG00000006251	rbm17	100	88.998	ENSATEG00000004406	rbm17	100	87.678	Anabas_testudineus
ENSACIG00000006251	rbm17	100	80.147	ENSAPLG00000004190	RBM17	100	80.147	Anas_platyrhynchos
ENSACIG00000006251	rbm17	89	76.393	ENSACAG00000005418	RBM17	99	76.393	Anolis_carolinensis
ENSACIG00000006251	rbm17	100	80.685	ENSANAG00000030127	RBM17	95	89.831	Aotus_nancymaae
ENSACIG00000006251	rbm17	100	70.264	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSACIG00000006251	rbm17	100	95.309	ENSACLG00000003928	rbm17	100	95.309	Astatotilapia_calliptera
ENSACIG00000006251	rbm17	100	81.034	ENSAMXG00000005853	rbm17	100	82.266	Astyanax_mexicanus
ENSACIG00000006251	rbm17	100	78.186	ENSBTAG00000011094	-	100	78.186	Bos_taurus
ENSACIG00000006251	rbm17	100	79.167	ENSBTAG00000021951	RBM17	100	79.167	Bos_taurus
ENSACIG00000006251	rbm17	97	30.456	WBGene00010233	F58B3.7	97	30.254	Caenorhabditis_elegans
ENSACIG00000006251	rbm17	100	79.412	ENSCJAG00000020573	RBM17	100	79.412	Callithrix_jacchus
ENSACIG00000006251	rbm17	100	79.167	ENSCAFG00000005206	RBM17	100	79.167	Canis_familiaris
ENSACIG00000006251	rbm17	100	78.818	ENSCAFG00020005420	RBM17	100	77.751	Canis_lupus_dingo
ENSACIG00000006251	rbm17	100	79.167	ENSCHIG00000023204	-	100	79.167	Capra_hircus
ENSACIG00000006251	rbm17	100	78.431	ENSCHIG00000019921	-	100	76.961	Capra_hircus
ENSACIG00000006251	rbm17	100	78.589	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSACIG00000006251	rbm17	96	63.776	ENSCAPG00000006275	RBM17	100	67.297	Cavia_aperea
ENSACIG00000006251	rbm17	100	78.729	ENSCPOG00000005679	RBM17	100	78.729	Cavia_porcellus
ENSACIG00000006251	rbm17	100	79.412	ENSCCAG00000018655	RBM17	95	89.831	Cebus_capucinus
ENSACIG00000006251	rbm17	100	78.922	ENSCATG00000041566	RBM17	95	89.831	Cercocebus_atys
ENSACIG00000006251	rbm17	100	78.345	ENSCLAG00000012195	RBM17	99	78.345	Chinchilla_lanigera
ENSACIG00000006251	rbm17	100	78.922	ENSCSAG00000013564	RBM17	100	78.922	Chlorocebus_sabaeus
ENSACIG00000006251	rbm17	92	61.538	ENSCHOG00000005131	RBM17	100	61.538	Choloepus_hoffmanni
ENSACIG00000006251	rbm17	100	79.657	ENSCPBG00000019836	RBM17	100	79.657	Chrysemys_picta_bellii
ENSACIG00000006251	rbm17	100	44.819	ENSCSAVG00000008782	-	100	42.105	Ciona_savignyi
ENSACIG00000006251	rbm17	100	78.818	ENSCANG00000030987	RBM17	95	89.831	Colobus_angolensis_palliatus
ENSACIG00000006251	rbm17	98	70.781	ENSCANG00000023715	-	99	70.380	Colobus_angolensis_palliatus
ENSACIG00000006251	rbm17	100	64.706	ENSCGRG00001009256	-	100	62.500	Cricetulus_griseus_chok1gshd
ENSACIG00000006251	rbm17	100	78.589	ENSCGRG00001013842	Rbm17	100	78.589	Cricetulus_griseus_chok1gshd
ENSACIG00000006251	rbm17	100	78.589	ENSCGRG00000006907	Rbm17	100	78.589	Cricetulus_griseus_crigri
ENSACIG00000006251	rbm17	100	88.670	ENSCSEG00000018164	rbm17	100	88.670	Cynoglossus_semilaevis
ENSACIG00000006251	rbm17	100	87.160	ENSCVAG00000002476	rbm17	100	86.375	Cyprinodon_variegatus
ENSACIG00000006251	rbm17	100	75.000	ENSDARG00000031346	rbm17	100	76.179	Danio_rerio
ENSACIG00000006251	rbm17	100	78.922	ENSDNOG00000035920	RBM17	100	78.922	Dasypus_novemcinctus
ENSACIG00000006251	rbm17	99	37.086	FBgn0086683	Spf45	99	36.245	Drosophila_melanogaster
ENSACIG00000006251	rbm17	85	84.834	ENSETEG00000006642	RBM17	86	84.834	Echinops_telfairi
ENSACIG00000006251	rbm17	65	69.048	ENSEBUG00000010253	rbm17	90	69.048	Eptatretus_burgeri
ENSACIG00000006251	rbm17	92	78.249	ENSEASG00005009236	-	100	76.393	Equus_asinus_asinus
ENSACIG00000006251	rbm17	100	78.293	ENSEASG00005019205	-	100	78.049	Equus_asinus_asinus
ENSACIG00000006251	rbm17	100	70.443	ENSECAG00000008939	RBM17	100	70.560	Equus_caballus
ENSACIG00000006251	rbm17	100	71.078	ENSECAG00000001379	-	100	69.608	Equus_caballus
ENSACIG00000006251	rbm17	86	61.538	ENSEEUG00000013077	RBM17	100	61.538	Erinaceus_europaeus
ENSACIG00000006251	rbm17	100	81.395	ENSELUG00000006440	rbm17	100	81.395	Esox_lucius
ENSACIG00000006251	rbm17	100	79.167	ENSFCAG00000031988	RBM17	100	79.167	Felis_catus
ENSACIG00000006251	rbm17	100	79.167	ENSFALG00000001790	RBM17	100	79.167	Ficedula_albicollis
ENSACIG00000006251	rbm17	100	78.345	ENSFDAG00000007470	RBM17	100	78.345	Fukomys_damarensis
ENSACIG00000006251	rbm17	100	89.136	ENSFHEG00000001266	rbm17	100	89.136	Fundulus_heteroclitus
ENSACIG00000006251	rbm17	99	79.236	ENSGMOG00000008438	rbm17	100	79.236	Gadus_morhua
ENSACIG00000006251	rbm17	100	80.392	ENSGALG00000006332	RBM17	100	80.392	Gallus_gallus
ENSACIG00000006251	rbm17	100	90.370	ENSGAFG00000019879	rbm17	100	90.370	Gambusia_affinis
ENSACIG00000006251	rbm17	99	90.099	ENSGACG00000019174	rbm17	99	90.099	Gasterosteus_aculeatus
ENSACIG00000006251	rbm17	100	79.657	ENSGAGG00000019906	RBM17	100	79.657	Gopherus_agassizii
ENSACIG00000006251	rbm17	100	95.309	ENSHBUG00000016624	rbm17	100	95.309	Haplochromis_burtoni
ENSACIG00000006251	rbm17	100	78.345	ENSHGLG00000011580	RBM17	100	78.345	Heterocephalus_glaber_female
ENSACIG00000006251	rbm17	100	78.345	ENSHGLG00100010460	RBM17	100	78.345	Heterocephalus_glaber_male
ENSACIG00000006251	rbm17	100	65.931	ENSHGLG00100010556	-	100	63.480	Heterocephalus_glaber_male
ENSACIG00000006251	rbm17	99	85.132	ENSHCOG00000010865	rbm17	100	85.132	Hippocampus_comes
ENSACIG00000006251	rbm17	100	74.453	ENSIPUG00000007699	Rbm17	100	80.535	Ictalurus_punctatus
ENSACIG00000006251	rbm17	100	78.589	ENSSTOG00000013591	RBM17	100	78.589	Ictidomys_tridecemlineatus
ENSACIG00000006251	rbm17	100	59.314	ENSJJAG00000000993	-	100	56.341	Jaculus_jaculus
ENSACIG00000006251	rbm17	100	78.589	ENSJJAG00000022886	Rbm17	100	78.589	Jaculus_jaculus
ENSACIG00000006251	rbm17	100	89.136	ENSKMAG00000021400	rbm17	100	89.136	Kryptolebias_marmoratus
ENSACIG00000006251	rbm17	100	91.852	ENSLBEG00000000881	rbm17	100	88.152	Labrus_bergylta
ENSACIG00000006251	rbm17	99	62.212	ENSLACG00000017297	RBM17	99	63.466	Latimeria_chalumnae
ENSACIG00000006251	rbm17	100	82.152	ENSLOCG00000015659	rbm17	100	80.685	Lepisosteus_oculatus
ENSACIG00000006251	rbm17	100	77.966	ENSLAFG00000011629	RBM17	100	77.966	Loxodonta_africana
ENSACIG00000006251	rbm17	100	78.922	ENSMFAG00000035521	RBM17	95	89.831	Macaca_fascicularis
ENSACIG00000006251	rbm17	100	78.922	ENSMMUG00000015152	RBM17	95	89.831	Macaca_mulatta
ENSACIG00000006251	rbm17	100	78.922	ENSMNEG00000017264	RBM17	95	89.831	Macaca_nemestrina
ENSACIG00000006251	rbm17	100	78.922	ENSMLEG00000029340	RBM17	95	89.831	Mandrillus_leucophaeus
ENSACIG00000006251	rbm17	100	87.204	ENSMAMG00000000387	rbm17	100	87.204	Mastacembelus_armatus
ENSACIG00000006251	rbm17	100	95.309	ENSMZEG00005015179	rbm17	100	95.309	Maylandia_zebra
ENSACIG00000006251	rbm17	100	79.227	ENSMGAG00000003981	RBM17	100	79.227	Meleagris_gallopavo
ENSACIG00000006251	rbm17	100	78.589	ENSMAUG00000019247	Rbm17	100	78.589	Mesocricetus_auratus
ENSACIG00000006251	rbm17	100	78.818	ENSMICG00000003976	-	100	78.818	Microcebus_murinus
ENSACIG00000006251	rbm17	100	72.289	ENSMICG00000041489	-	100	72.289	Microcebus_murinus
ENSACIG00000006251	rbm17	93	63.852	ENSMOCG00000014517	-	99	63.852	Microtus_ochrogaster
ENSACIG00000006251	rbm17	100	78.589	ENSMOCG00000011847	Rbm17	100	78.589	Microtus_ochrogaster
ENSACIG00000006251	rbm17	100	84.096	ENSMMOG00000010264	rbm17	100	81.205	Mola_mola
ENSACIG00000006251	rbm17	100	79.167	ENSMODG00000016648	RBM17	100	79.167	Monodelphis_domestica
ENSACIG00000006251	rbm17	100	89.136	ENSMALG00000010597	rbm17	100	89.136	Monopterus_albus
ENSACIG00000006251	rbm17	100	78.589	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.589	Mus_caroli
ENSACIG00000006251	rbm17	100	78.589	ENSMUSG00000037197	Rbm17	100	78.589	Mus_musculus
ENSACIG00000006251	rbm17	100	78.832	MGP_PahariEiJ_G0019233	Rbm17	100	78.832	Mus_pahari
ENSACIG00000006251	rbm17	100	78.589	MGP_SPRETEiJ_G0024091	Rbm17	100	78.589	Mus_spretus
ENSACIG00000006251	rbm17	86	76.638	ENSMPUG00000016359	RBM17	96	76.638	Mustela_putorius_furo
ENSACIG00000006251	rbm17	100	75.980	ENSMLUG00000025709	-	100	74.755	Myotis_lucifugus
ENSACIG00000006251	rbm17	100	76.942	ENSMLUG00000002302	-	100	76.942	Myotis_lucifugus
ENSACIG00000006251	rbm17	100	78.589	ENSNGAG00000000741	Rbm17	100	78.589	Nannospalax_galili
ENSACIG00000006251	rbm17	81	76.404	ENSNGAG00000000663	-	89	72.340	Nannospalax_galili
ENSACIG00000006251	rbm17	100	91.358	ENSNBRG00000018148	rbm17	100	91.358	Neolamprologus_brichardi
ENSACIG00000006251	rbm17	100	79.064	ENSNLEG00000033350	RBM17	95	89.831	Nomascus_leucogenys
ENSACIG00000006251	rbm17	100	73.775	ENSMEUG00000011347	RBM17	100	73.775	Notamacropus_eugenii
ENSACIG00000006251	rbm17	100	70.025	ENSOPRG00000002993	RBM17	100	68.059	Ochotona_princeps
ENSACIG00000006251	rbm17	100	78.398	ENSODEG00000004393	RBM17	100	78.398	Octodon_degus
ENSACIG00000006251	rbm17	97	62.312	ENSODEG00000007286	-	99	60.705	Octodon_degus
ENSACIG00000006251	rbm17	100	95.086	ENSONIG00000011838	rbm17	100	95.086	Oreochromis_niloticus
ENSACIG00000006251	rbm17	100	77.995	ENSOANG00000015455	RBM17	100	78.484	Ornithorhynchus_anatinus
ENSACIG00000006251	rbm17	100	90.617	ENSORLG00000028798	rbm17	100	90.864	Oryzias_latipes
ENSACIG00000006251	rbm17	100	90.123	ENSORLG00020004593	rbm17	100	90.123	Oryzias_latipes_hni
ENSACIG00000006251	rbm17	100	91.358	ENSORLG00015000033	rbm17	100	91.358	Oryzias_latipes_hsok
ENSACIG00000006251	rbm17	100	87.441	ENSOMEG00000012060	rbm17	100	93.125	Oryzias_melastigma
ENSACIG00000006251	rbm17	100	78.832	ENSOGAG00000015687	RBM17	100	78.832	Otolemur_garnettii
ENSACIG00000006251	rbm17	100	79.167	ENSOARG00000012975	RBM17	100	79.167	Ovis_aries
ENSACIG00000006251	rbm17	100	79.310	ENSPPAG00000032347	RBM17	95	89.831	Pan_paniscus
ENSACIG00000006251	rbm17	100	79.167	ENSPPRG00000010706	RBM17	100	79.167	Panthera_pardus
ENSACIG00000006251	rbm17	100	79.167	ENSPTIG00000007596	RBM17	100	79.167	Panthera_tigris_altaica
ENSACIG00000006251	rbm17	100	79.310	ENSPTRG00000002265	RBM17	95	89.831	Pan_troglodytes
ENSACIG00000006251	rbm17	100	78.922	ENSPANG00000023425	RBM17	95	89.831	Papio_anubis
ENSACIG00000006251	rbm17	100	77.641	ENSPKIG00000005048	-	100	77.641	Paramormyrops_kingsleyae
ENSACIG00000006251	rbm17	100	80.882	ENSPKIG00000025526	rbm17	100	78.133	Paramormyrops_kingsleyae
ENSACIG00000006251	rbm17	100	78.345	ENSPSIG00000012332	RBM17	100	78.345	Pelodiscus_sinensis
ENSACIG00000006251	rbm17	100	84.634	ENSPMGG00000007980	rbm17	100	85.122	Periophthalmus_magnuspinnatus
ENSACIG00000006251	rbm17	100	78.589	ENSPEMG00000014320	Rbm17	100	78.589	Peromyscus_maniculatus_bairdii
ENSACIG00000006251	rbm17	100	78.780	ENSPCIG00000019260	-	100	78.780	Phascolarctos_cinereus
ENSACIG00000006251	rbm17	100	86.730	ENSPFOG00000013271	rbm17	100	86.730	Poecilia_formosa
ENSACIG00000006251	rbm17	100	87.654	ENSPLAG00000004455	rbm17	100	87.654	Poecilia_latipinna
ENSACIG00000006251	rbm17	100	90.370	ENSPMEG00000014864	rbm17	100	90.370	Poecilia_mexicana
ENSACIG00000006251	rbm17	100	89.383	ENSPREG00000015589	rbm17	100	89.383	Poecilia_reticulata
ENSACIG00000006251	rbm17	99	61.139	ENSPPYG00000019881	-	100	61.139	Pongo_abelii
ENSACIG00000006251	rbm17	81	58.663	ENSPPYG00000019042	-	100	57.012	Pongo_abelii
ENSACIG00000006251	rbm17	100	78.922	ENSPPYG00000002067	RBM17	100	78.922	Pongo_abelii
ENSACIG00000006251	rbm17	100	71.569	ENSPCAG00000016879	RBM17	100	71.569	Procavia_capensis
ENSACIG00000006251	rbm17	100	78.922	ENSPCOG00000027881	RBM17	100	78.922	Propithecus_coquereli
ENSACIG00000006251	rbm17	100	71.814	ENSPVAG00000015499	RBM17	100	71.324	Pteropus_vampyrus
ENSACIG00000006251	rbm17	100	85.185	ENSPNYG00000015274	rbm17	100	85.432	Pundamilia_nyererei
ENSACIG00000006251	rbm17	100	83.457	ENSPNAG00000030046	rbm17	100	84.938	Pygocentrus_nattereri
ENSACIG00000006251	rbm17	100	78.589	ENSRNOG00000018767	Rbm17	100	78.589	Rattus_norvegicus
ENSACIG00000006251	rbm17	100	79.361	ENSRBIG00000043727	RBM17	95	89.831	Rhinopithecus_bieti
ENSACIG00000006251	rbm17	100	78.922	ENSRROG00000044142	RBM17	95	89.831	Rhinopithecus_roxellana
ENSACIG00000006251	rbm17	100	79.167	ENSSBOG00000031661	-	93	89.565	Saimiri_boliviensis_boliviensis
ENSACIG00000006251	rbm17	100	70.098	ENSSBOG00000023653	-	100	70.098	Saimiri_boliviensis_boliviensis
ENSACIG00000006251	rbm17	100	79.167	ENSSHAG00000012480	-	100	79.167	Sarcophilus_harrisii
ENSACIG00000006251	rbm17	100	79.756	ENSSFOG00015009892	rbm17	100	79.756	Scleropages_formosus
ENSACIG00000006251	rbm17	100	86.667	ENSSMAG00000012368	rbm17	100	86.667	Scophthalmus_maximus
ENSACIG00000006251	rbm17	100	91.605	ENSSDUG00000015015	rbm17	100	91.605	Seriola_dumerili
ENSACIG00000006251	rbm17	100	91.605	ENSSLDG00000014486	rbm17	100	91.605	Seriola_lalandi_dorsalis
ENSACIG00000006251	rbm17	99	79.361	ENSSPUG00000001036	RBM17	99	79.361	Sphenodon_punctatus
ENSACIG00000006251	rbm17	100	93.827	ENSSPAG00000002338	rbm17	100	93.827	Stegastes_partitus
ENSACIG00000006251	rbm17	100	78.922	ENSSSCG00000011134	RBM17	100	78.922	Sus_scrofa
ENSACIG00000006251	rbm17	100	78.832	ENSTGUG00000002013	RBM17	100	78.832	Taeniopygia_guttata
ENSACIG00000006251	rbm17	100	89.630	ENSTRUG00000010698	rbm17	100	89.630	Takifugu_rubripes
ENSACIG00000006251	rbm17	100	88.698	ENSTNIG00000006892	rbm17	100	88.698	Tetraodon_nigroviridis
ENSACIG00000006251	rbm17	100	64.039	ENSTBEG00000014686	RBM17	100	64.039	Tupaia_belangeri
ENSACIG00000006251	rbm17	90	77.929	ENSTTRG00000001344	RBM17	100	77.929	Tursiops_truncatus
ENSACIG00000006251	rbm17	100	79.310	ENSUAMG00000009499	RBM17	100	77.995	Ursus_americanus
ENSACIG00000006251	rbm17	100	79.412	ENSUMAG00000012237	RBM17	100	79.412	Ursus_maritimus
ENSACIG00000006251	rbm17	100	69.608	ENSVPAG00000005497	RBM17	100	69.608	Vicugna_pacos
ENSACIG00000006251	rbm17	100	78.818	ENSVVUG00000006780	RBM17	100	77.751	Vulpes_vulpes
ENSACIG00000006251	rbm17	99	77.531	ENSXETG00000018123	rbm17	100	76.296	Xenopus_tropicalis
ENSACIG00000006251	rbm17	100	90.370	ENSXMAG00000008674	rbm17	100	90.370	Xiphophorus_maculatus