EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006351 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2586 bases
Position: chrCCOE01001675.1:1127920-1130505
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008099	RRM_1	PF00076.22	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008339	-	837	-	ENSACIP00000008099	278 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006351	alyref	98	51.389	ENSACIG00000020351	-	99	51.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006351	alyref	97	52.747	ENSAPOG00000000183	-	98	50.549	Acanthochromis_polyacanthus
ENSACIG00000006351	alyref	98	84.615	ENSAOCG00000014012	alyref	99	81.550	Amphiprion_ocellaris
ENSACIG00000006351	alyref	97	51.648	ENSAOCG00000019305	-	98	49.817	Amphiprion_ocellaris
ENSACIG00000006351	alyref	98	84.615	ENSAPEG00000014603	alyref	99	81.550	Amphiprion_percula
ENSACIG00000006351	alyref	97	53.114	ENSAPEG00000013527	-	98	49.451	Amphiprion_percula
ENSACIG00000006351	alyref	97	55.351	ENSATEG00000000382	-	97	53.480	Anabas_testudineus
ENSACIG00000006351	alyref	98	79.422	ENSATEG00000004307	alyref	99	80.727	Anabas_testudineus
ENSACIG00000006351	alyref	50	69.718	ENSAPLG00000014745	-	98	69.343	Anas_platyrhynchos
ENSACIG00000006351	alyref	98	86.496	ENSACLG00000008432	alyref	99	84.191	Astatotilapia_calliptera
ENSACIG00000006351	alyref	97	54.874	ENSACLG00000010184	-	98	53.623	Astatotilapia_calliptera
ENSACIG00000006351	alyref	98	72.760	ENSAMXG00000007359	alyref	99	73.285	Astyanax_mexicanus
ENSACIG00000006351	alyref	97	47.826	ENSCING00000013568	-	98	45.588	Ciona_intestinalis
ENSACIG00000006351	alyref	97	45.091	ENSCSAVG00000003324	-	98	43.704	Ciona_savignyi
ENSACIG00000006351	alyref	98	73.091	ENSCSEG00000017800	alyref	99	72.426	Cynoglossus_semilaevis
ENSACIG00000006351	alyref	97	46.863	ENSCVAG00000007789	-	97	45.421	Cyprinodon_variegatus
ENSACIG00000006351	alyref	98	80.586	ENSCVAG00000014869	alyref	99	79.336	Cyprinodon_variegatus
ENSACIG00000006351	alyref	98	77.580	ENSDARG00000077732	alyref	99	72.857	Danio_rerio
ENSACIG00000006351	alyref	70	43.284	ENSEBUG00000006305	alyref	99	38.078	Eptatretus_burgeri
ENSACIG00000006351	alyref	98	51.103	ENSEBUG00000008253	alyref	95	46.863	Eptatretus_burgeri
ENSACIG00000006351	alyref	98	69.091	ENSELUG00000017178	alyref	99	70.073	Esox_lucius
ENSACIG00000006351	alyref	98	67.857	ENSELUG00000008849	-	99	61.151	Esox_lucius
ENSACIG00000006351	alyref	58	78.182	ENSFALG00000011923	-	94	72.549	Ficedula_albicollis
ENSACIG00000006351	alyref	97	47.601	ENSFHEG00000004698	-	98	46.494	Fundulus_heteroclitus
ENSACIG00000006351	alyref	98	80.220	ENSFHEG00000019426	alyref	99	77.491	Fundulus_heteroclitus
ENSACIG00000006351	alyref	68	58.763	ENSGMOG00000013122	-	100	58.854	Gadus_morhua
ENSACIG00000006351	alyref	98	65.091	ENSGMOG00000009882	alyref	99	63.370	Gadus_morhua
ENSACIG00000006351	alyref	98	78.182	ENSGAFG00000006014	alyref	99	78.755	Gambusia_affinis
ENSACIG00000006351	alyref	97	47.212	ENSGAFG00000007573	-	97	43.866	Gambusia_affinis
ENSACIG00000006351	alyref	98	86.496	ENSHBUG00000020196	alyref	99	84.191	Haplochromis_burtoni
ENSACIG00000006351	alyref	97	54.839	ENSHBUG00000001454	-	98	52.899	Haplochromis_burtoni
ENSACIG00000006351	alyref	97	48.897	ENSHCOG00000012825	-	95	46.125	Hippocampus_comes
ENSACIG00000006351	alyref	98	71.841	ENSIPUG00000009469	alyref	99	72.364	Ictalurus_punctatus
ENSACIG00000006351	alyref	73	61.165	ENSSTOG00000016570	-	98	57.353	Ictidomys_tridecemlineatus
ENSACIG00000006351	alyref	97	52.574	ENSKMAG00000006462	-	97	51.111	Kryptolebias_marmoratus
ENSACIG00000006351	alyref	98	75.547	ENSKMAG00000008912	alyref	99	77.574	Kryptolebias_marmoratus
ENSACIG00000006351	alyref	98	47.603	ENSLBEG00000005387	-	99	47.387	Labrus_bergylta
ENSACIG00000006351	alyref	97	47.653	ENSLBEG00000012930	-	99	45.620	Labrus_bergylta
ENSACIG00000006351	alyref	98	82.971	ENSLBEG00000023118	alyref	90	83.333	Labrus_bergylta
ENSACIG00000006351	alyref	76	69.302	ENSLOCG00000013879	alyref	88	70.423	Lepisosteus_oculatus
ENSACIG00000006351	alyref	97	53.137	ENSMAMG00000005464	-	98	49.084	Mastacembelus_armatus
ENSACIG00000006351	alyref	98	82.117	ENSMAMG00000003034	alyref	99	79.779	Mastacembelus_armatus
ENSACIG00000006351	alyref	97	54.152	ENSMZEG00005012096	-	98	53.261	Maylandia_zebra
ENSACIG00000006351	alyref	98	86.496	ENSMZEG00005008639	alyref	99	84.191	Maylandia_zebra
ENSACIG00000006351	alyref	98	80.220	ENSMMOG00000012458	alyref	96	76.015	Mola_mola
ENSACIG00000006351	alyref	97	47.985	ENSMMOG00000007032	-	98	44.948	Mola_mola
ENSACIG00000006351	alyref	97	51.773	ENSMALG00000006054	-	98	48.913	Monopterus_albus
ENSACIG00000006351	alyref	97	53.472	ENSMLUG00000022467	-	98	51.971	Myotis_lucifugus
ENSACIG00000006351	alyref	97	55.720	ENSMLUG00000022178	-	98	53.506	Myotis_lucifugus
ENSACIG00000006351	alyref	98	54.255	ENSMLUG00000006521	-	98	56.115	Myotis_lucifugus
ENSACIG00000006351	alyref	97	55.435	ENSMLUG00000009247	-	98	49.817	Myotis_lucifugus
ENSACIG00000006351	alyref	96	54.514	ENSMLUG00000014372	-	98	55.235	Myotis_lucifugus
ENSACIG00000006351	alyref	97	53.957	ENSMLUG00000028605	-	98	54.317	Myotis_lucifugus
ENSACIG00000006351	alyref	98	54.610	ENSMLUG00000030671	-	99	51.071	Myotis_lucifugus
ENSACIG00000006351	alyref	98	56.738	ENSMLUG00000004098	-	98	55.396	Myotis_lucifugus
ENSACIG00000006351	alyref	98	64.103	ENSNGAG00000022014	-	99	59.041	Nannospalax_galili
ENSACIG00000006351	alyref	98	54.122	ENSNBRG00000017460	-	99	53.261	Neolamprologus_brichardi
ENSACIG00000006351	alyref	98	88.686	ENSNBRG00000001747	alyref	99	89.706	Neolamprologus_brichardi
ENSACIG00000006351	alyref	97	57.143	ENSONIG00000003296	-	98	56.044	Oreochromis_niloticus
ENSACIG00000006351	alyref	98	84.116	ENSONIG00000019434	alyref	99	87.273	Oreochromis_niloticus
ENSACIG00000006351	alyref	97	39.937	ENSORLG00000001620	-	58	44.860	Oryzias_latipes
ENSACIG00000006351	alyref	98	83.150	ENSORLG00020011942	alyref	99	81.550	Oryzias_latipes_hni
ENSACIG00000006351	alyref	97	47.601	ENSORLG00020015673	-	98	44.322	Oryzias_latipes_hni
ENSACIG00000006351	alyref	98	83.150	ENSORLG00015022664	alyref	99	78.967	Oryzias_latipes_hsok
ENSACIG00000006351	alyref	97	48.162	ENSORLG00015015143	-	98	45.421	Oryzias_latipes_hsok
ENSACIG00000006351	alyref	97	49.817	ENSOMEG00000007158	-	97	46.886	Oryzias_melastigma
ENSACIG00000006351	alyref	98	83.883	ENSOMEG00000019176	alyref	99	78.967	Oryzias_melastigma
ENSACIG00000006351	alyref	68	76.190	ENSPPAG00000036403	-	68	73.016	Pan_paniscus
ENSACIG00000006351	alyref	97	71.691	ENSPKIG00000006233	-	80	64.338	Paramormyrops_kingsleyae
ENSACIG00000006351	alyref	98	71.533	ENSPKIG00000007070	alyref	99	68.750	Paramormyrops_kingsleyae
ENSACIG00000006351	alyref	98	82.545	ENSPMGG00000016600	alyref	90	76.384	Periophthalmus_magnuspinnatus
ENSACIG00000006351	alyref	71	48.744	ENSPMGG00000012994	-	97	45.685	Periophthalmus_magnuspinnatus
ENSACIG00000006351	alyref	98	61.905	ENSPEMG00000016628	-	78	66.842	Peromyscus_maniculatus_bairdii
ENSACIG00000006351	alyref	98	76.449	ENSPFOG00000022825	alyref	98	76.277	Poecilia_formosa
ENSACIG00000006351	alyref	97	46.377	ENSPFOG00000017094	-	97	44.610	Poecilia_formosa
ENSACIG00000006351	alyref	97	46.377	ENSPLAG00000014380	-	97	44.610	Poecilia_latipinna
ENSACIG00000006351	alyref	98	76.364	ENSPLAG00000006948	alyref	99	76.923	Poecilia_latipinna
ENSACIG00000006351	alyref	97	46.377	ENSPMEG00000023039	-	97	44.610	Poecilia_mexicana
ENSACIG00000006351	alyref	98	76.449	ENSPMEG00000003547	alyref	99	76.277	Poecilia_mexicana
ENSACIG00000006351	alyref	98	76.727	ENSPREG00000015795	alyref	99	77.289	Poecilia_reticulata
ENSACIG00000006351	alyref	98	47.826	ENSPREG00000003649	-	99	46.125	Poecilia_reticulata
ENSACIG00000006351	alyref	98	52.688	ENSPNYG00000002879	-	98	50.903	Pundamilia_nyererei
ENSACIG00000006351	alyref	98	86.496	ENSPNYG00000017498	alyref	99	84.191	Pundamilia_nyererei
ENSACIG00000006351	alyref	98	73.551	ENSPNAG00000002531	alyref	99	69.231	Pygocentrus_nattereri
ENSACIG00000006351	alyref	78	67.857	ENSSBOG00000030924	-	85	70.256	Saimiri_boliviensis_boliviensis
ENSACIG00000006351	alyref	97	54.286	ENSSHAG00000000609	-	99	53.114	Sarcophilus_harrisii
ENSACIG00000006351	alyref	97	54.909	ENSSHAG00000012866	-	99	50.183	Sarcophilus_harrisii
ENSACIG00000006351	alyref	76	75.943	ENSSFOG00015003923	alyref	72	69.048	Scleropages_formosus
ENSACIG00000006351	alyref	70	75.385	ENSSFOG00015003678	alyref	85	69.744	Scleropages_formosus
ENSACIG00000006351	alyref	98	82.847	ENSSMAG00000009283	alyref	99	79.779	Scophthalmus_maximus
ENSACIG00000006351	alyref	97	51.625	ENSSMAG00000011169	-	100	53.234	Scophthalmus_maximus
ENSACIG00000006351	alyref	98	84.615	ENSSDUG00000016158	alyref	99	82.657	Seriola_dumerili
ENSACIG00000006351	alyref	98	79.197	ENSSLDG00000017803	alyref	99	80.515	Seriola_lalandi_dorsalis
ENSACIG00000006351	alyref	98	52.727	ENSSPAG00000017028	-	96	50.549	Stegastes_partitus
ENSACIG00000006351	alyref	98	48.944	ENSTRUG00000003051	-	99	48.014	Takifugu_rubripes
ENSACIG00000006351	alyref	98	75.090	ENSTNIG00000011595	alyref	99	72.527	Tetraodon_nigroviridis
ENSACIG00000006351	alyref	98	49.638	ENSTNIG00000014136	-	99	45.620	Tetraodon_nigroviridis
ENSACIG00000006351	alyref	69	76.042	ENSVVUG00000000272	-	81	73.016	Vulpes_vulpes
ENSACIG00000006351	alyref	99	77.419	ENSXCOG00000018047	alyref	98	78.755	Xiphophorus_couchianus
ENSACIG00000006351	alyref	97	47.810	ENSXMAG00000018086	-	99	45.756	Xiphophorus_maculatus
ENSACIG00000006351	alyref	99	77.419	ENSXMAG00000012218	alyref	98	78.755	Xiphophorus_maculatus