EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006441 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 13421 bases
Position: chrCCOE01000998.1:437149-450569
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008217	Fox-1_C	PF12414.8	3.4e-21	1	1
ENSACIP00000008217	RRM_1	PF00076.22	5.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008464	-	1056	-	ENSACIP00000008217	351 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006441	rbfox1l	61	54.275	ENSACIG00000005478	rbfox1	66	54.924
ENSACIG00000006441	rbfox1l	84	53.994	ENSACIG00000010817	rbfox3b	91	56.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006441	rbfox1l	97	83.668	ENSAPOG00000016304	rbfox1l	97	84.527	Acanthochromis_polyacanthus
ENSACIG00000006441	rbfox1l	87	82.298	ENSAOCG00000020938	rbfox1l	94	79.344	Amphiprion_ocellaris
ENSACIG00000006441	rbfox1l	100	82.609	ENSAPEG00000008232	rbfox1l	100	83.424	Amphiprion_percula
ENSACIG00000006441	rbfox1l	100	83.820	ENSATEG00000022649	rbfox1l	100	83.820	Anabas_testudineus
ENSACIG00000006441	rbfox1l	61	64.372	ENSACAG00000011931	-	89	66.529	Anolis_carolinensis
ENSACIG00000006441	rbfox1l	100	86.877	ENSACLG00000021394	rbfox1l	100	86.877	Astatotilapia_calliptera
ENSACIG00000006441	rbfox1l	100	81.675	ENSAMXG00000010470	rbfox1l	100	81.675	Astyanax_mexicanus
ENSACIG00000006441	rbfox1l	100	50.129	ENSCPBG00000010944	-	100	50.769	Chrysemys_picta_bellii
ENSACIG00000006441	rbfox1l	100	82.895	ENSCSEG00000018898	rbfox1l	100	82.895	Cynoglossus_semilaevis
ENSACIG00000006441	rbfox1l	100	82.245	ENSCVAG00000007986	rbfox1l	100	81.723	Cyprinodon_variegatus
ENSACIG00000006441	rbfox1l	100	80.890	ENSDARG00000021184	rbfox1l	100	80.890	Danio_rerio
ENSACIG00000006441	rbfox1l	100	76.590	ENSELUG00000015077	rbfox1l	100	77.608	Esox_lucius
ENSACIG00000006441	rbfox1l	100	72.805	ENSFHEG00000016557	rbfox1l	100	72.805	Fundulus_heteroclitus
ENSACIG00000006441	rbfox1l	100	76.501	ENSGMOG00000005040	rbfox1l	100	76.501	Gadus_morhua
ENSACIG00000006441	rbfox1l	92	79.661	ENSGAFG00000013211	rbfox1l	97	79.661	Gambusia_affinis
ENSACIG00000006441	rbfox1l	100	82.507	ENSGACG00000010757	rbfox1l	100	82.507	Gasterosteus_aculeatus
ENSACIG00000006441	rbfox1l	62	63.158	ENSGAGG00000012440	-	84	66.387	Gopherus_agassizii
ENSACIG00000006441	rbfox1l	100	86.877	ENSHBUG00000013406	rbfox1l	100	86.877	Haplochromis_burtoni
ENSACIG00000006441	rbfox1l	100	79.427	ENSHCOG00000020771	rbfox1l	100	79.427	Hippocampus_comes
ENSACIG00000006441	rbfox1l	99	73.670	ENSIPUG00000000065	rbfox1l	99	75.284	Ictalurus_punctatus
ENSACIG00000006441	rbfox1l	100	81.918	ENSKMAG00000005146	rbfox1l	100	83.562	Kryptolebias_marmoratus
ENSACIG00000006441	rbfox1l	100	84.595	ENSLBEG00000017089	rbfox1l	100	84.595	Labrus_bergylta
ENSACIG00000006441	rbfox1l	100	82.768	ENSMAMG00000019480	rbfox1l	100	82.768	Mastacembelus_armatus
ENSACIG00000006441	rbfox1l	100	86.877	ENSMZEG00005016374	rbfox1l	100	86.877	Maylandia_zebra
ENSACIG00000006441	rbfox1l	100	83.641	ENSMMOG00000016530	rbfox1l	100	83.641	Mola_mola
ENSACIG00000006441	rbfox1l	100	80.739	ENSMALG00000009384	rbfox1l	100	80.739	Monopterus_albus
ENSACIG00000006441	rbfox1l	100	88.095	ENSNBRG00000003346	rbfox1l	100	88.095	Neolamprologus_brichardi
ENSACIG00000006441	rbfox1l	100	87.664	ENSONIG00000012754	rbfox1l	100	87.664	Oreochromis_niloticus
ENSACIG00000006441	rbfox1l	100	83.290	ENSORLG00000011269	rbfox1l	100	84.073	Oryzias_latipes
ENSACIG00000006441	rbfox1l	100	83.812	ENSORLG00020000162	rbfox1l	100	84.595	Oryzias_latipes_hni
ENSACIG00000006441	rbfox1l	100	83.812	ENSORLG00015013464	rbfox1l	100	84.595	Oryzias_latipes_hsok
ENSACIG00000006441	rbfox1l	100	83.812	ENSOMEG00000010584	rbfox1l	100	84.595	Oryzias_melastigma
ENSACIG00000006441	rbfox1l	100	81.842	ENSPKIG00000012029	rbfox1l	100	81.842	Paramormyrops_kingsleyae
ENSACIG00000006441	rbfox1l	100	74.406	ENSPMGG00000012082	rbfox1l	100	75.462	Periophthalmus_magnuspinnatus
ENSACIG00000006441	rbfox1l	100	81.723	ENSPFOG00000009338	rbfox1l	100	81.723	Poecilia_formosa
ENSACIG00000006441	rbfox1l	84	80.317	ENSPLAG00000012816	rbfox1l	99	80.317	Poecilia_latipinna
ENSACIG00000006441	rbfox1l	100	82.337	ENSPMEG00000017597	rbfox1l	100	82.880	Poecilia_mexicana
ENSACIG00000006441	rbfox1l	100	82.609	ENSPREG00000007940	rbfox1l	100	83.152	Poecilia_reticulata
ENSACIG00000006441	rbfox1l	100	86.614	ENSPNYG00000002098	rbfox1l	100	86.614	Pundamilia_nyererei
ENSACIG00000006441	rbfox1l	100	78.068	ENSPNAG00000001620	rbfox1l	100	78.329	Pygocentrus_nattereri
ENSACIG00000006441	rbfox1l	100	79.790	ENSSFOG00015000675	rbfox1l	100	79.790	Scleropages_formosus
ENSACIG00000006441	rbfox1l	100	82.507	ENSSMAG00000013090	rbfox1l	100	82.507	Scophthalmus_maximus
ENSACIG00000006441	rbfox1l	100	83.463	ENSSDUG00000008705	rbfox1l	100	83.463	Seriola_dumerili
ENSACIG00000006441	rbfox1l	100	83.463	ENSSLDG00000022256	rbfox1l	100	83.463	Seriola_lalandi_dorsalis
ENSACIG00000006441	rbfox1l	100	83.696	ENSSPAG00000016620	rbfox1l	100	84.511	Stegastes_partitus
ENSACIG00000006441	rbfox1l	96	78.630	ENSTRUG00000015905	rbfox1l	100	79.452	Takifugu_rubripes
ENSACIG00000006441	rbfox1l	62	73.962	ENSTNIG00000008088	rbfox1l	97	75.581	Tetraodon_nigroviridis
ENSACIG00000006441	rbfox1l	100	81.462	ENSXMAG00000023471	rbfox1l	100	81.462	Xiphophorus_maculatus