EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000006498 (Gene tree)
Gene ID: -
Gene Symbol: lsm7
Alias: fj64g01|wu:fj64g01|zgc:66405
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 8623 bases
Position: chrCCOE01000755.1:3485-12107
Accession: ZDB-GENE-030131-8284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008342	LSM	PF01423.22	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008592	-	381	-	ENSACIP00000008342	126 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006498	lsm7	78	94.898	ENSG00000130332	LSM7	95	94.898	Homo_sapiens
ENSACIG00000006498	lsm7	75	98.936	ENSAPOG00000015573	lsm7	81	98.936	Acanthochromis_polyacanthus
ENSACIG00000006498	lsm7	77	93.814	ENSAMEG00000005484	LSM7	94	93.814	Ailuropoda_melanoleuca
ENSACIG00000006498	lsm7	77	98.969	ENSAOCG00000001077	lsm7	88	98.969	Amphiprion_ocellaris
ENSACIG00000006498	lsm7	78	98.980	ENSAPEG00000000694	lsm7	95	98.980	Amphiprion_percula
ENSACIG00000006498	lsm7	77	98.969	ENSAPEG00000024447	lsm7	88	98.969	Amphiprion_percula
ENSACIG00000006498	lsm7	78	98.980	ENSATEG00000008557	lsm7	95	98.980	Anabas_testudineus
ENSACIG00000006498	lsm7	78	94.898	ENSANAG00000037196	-	95	94.898	Aotus_nancymaae
ENSACIG00000006498	lsm7	78	85.714	ENSANAG00000022222	-	95	85.714	Aotus_nancymaae
ENSACIG00000006498	lsm7	78	100.000	ENSACLG00000021021	lsm7	95	100.000	Astatotilapia_calliptera
ENSACIG00000006498	lsm7	78	96.939	ENSAMXG00000037622	lsm7	95	96.939	Astyanax_mexicanus
ENSACIG00000006498	lsm7	78	94.898	ENSBTAG00000004521	LSM7	95	94.898	Bos_taurus
ENSACIG00000006498	lsm7	75	60.000	WBGene00003081	lsm-7	91	60.000	Caenorhabditis_elegans
ENSACIG00000006498	lsm7	56	75.714	ENSCJAG00000039713	-	85	75.714	Callithrix_jacchus
ENSACIG00000006498	lsm7	77	93.814	ENSCAFG00000019409	LSM7	94	93.814	Canis_familiaris
ENSACIG00000006498	lsm7	77	93.814	ENSCAFG00020018168	LSM7	71	93.814	Canis_lupus_dingo
ENSACIG00000006498	lsm7	77	94.845	ENSCHIG00000023663	LSM7	94	94.845	Capra_hircus
ENSACIG00000006498	lsm7	53	97.015	ENSCAPG00000014534	LSM7	94	97.015	Cavia_aperea
ENSACIG00000006498	lsm7	78	94.898	ENSCPOG00000014025	LSM7	96	94.845	Cavia_porcellus
ENSACIG00000006498	lsm7	77	94.845	ENSCCAG00000035456	LSM7	95	94.845	Cebus_capucinus
ENSACIG00000006498	lsm7	78	94.898	ENSCATG00000023543	LSM7	95	94.898	Cercocebus_atys
ENSACIG00000006498	lsm7	78	94.898	ENSCLAG00000011635	LSM7	95	94.898	Chinchilla_lanigera
ENSACIG00000006498	lsm7	78	94.898	ENSCSAG00000011599	LSM7	95	94.898	Chlorocebus_sabaeus
ENSACIG00000006498	lsm7	54	97.059	ENSCPBG00000021317	LSM7	72	97.059	Chrysemys_picta_bellii
ENSACIG00000006498	lsm7	75	82.105	ENSCING00000022134	-	96	82.105	Ciona_intestinalis
ENSACIG00000006498	lsm7	78	94.898	ENSCANG00000035525	LSM7	95	94.898	Colobus_angolensis_palliatus
ENSACIG00000006498	lsm7	71	83.333	ENSCGRG00001016005	-	92	83.333	Cricetulus_griseus_chok1gshd
ENSACIG00000006498	lsm7	78	93.878	ENSCGRG00001000807	-	95	93.878	Cricetulus_griseus_chok1gshd
ENSACIG00000006498	lsm7	71	83.333	ENSCGRG00000006821	-	92	83.333	Cricetulus_griseus_crigri
ENSACIG00000006498	lsm7	77	93.814	ENSCGRG00000014355	-	93	93.814	Cricetulus_griseus_crigri
ENSACIG00000006498	lsm7	77	98.969	ENSCSEG00000014900	lsm7	82	98.969	Cynoglossus_semilaevis
ENSACIG00000006498	lsm7	77	97.938	ENSCVAG00000021091	lsm7	90	97.938	Cyprinodon_variegatus
ENSACIG00000006498	lsm7	78	97.959	ENSDARG00000058328	lsm7	95	97.959	Danio_rerio
ENSACIG00000006498	lsm7	78	93.878	ENSDORG00000024460	Lsm7	96	93.878	Dipodomys_ordii
ENSACIG00000006498	lsm7	75	72.917	FBgn0261068	LSm7	87	72.917	Drosophila_melanogaster
ENSACIG00000006498	lsm7	77	92.784	ENSETEG00000012788	LSM7	95	92.784	Echinops_telfairi
ENSACIG00000006498	lsm7	77	85.567	ENSEBUG00000016992	lsm7	93	85.567	Eptatretus_burgeri
ENSACIG00000006498	lsm7	66	59.036	ENSEBUG00000010470	-	79	59.036	Eptatretus_burgeri
ENSACIG00000006498	lsm7	78	91.837	ENSECAG00000001440	LSM7	63	91.837	Equus_caballus
ENSACIG00000006498	lsm7	78	93.878	ENSFCAG00000003445	LSM7	95	93.878	Felis_catus
ENSACIG00000006498	lsm7	77	95.876	ENSFALG00000011912	LSM7	96	95.876	Ficedula_albicollis
ENSACIG00000006498	lsm7	73	95.652	ENSFDAG00000007661	LSM7	96	95.652	Fukomys_damarensis
ENSACIG00000006498	lsm7	77	97.938	ENSFHEG00000006349	lsm7	87	97.938	Fundulus_heteroclitus
ENSACIG00000006498	lsm7	77	96.907	ENSGMOG00000013320	lsm7	94	96.907	Gadus_morhua
ENSACIG00000006498	lsm7	78	97.959	ENSGAFG00000013902	lsm7	95	97.959	Gambusia_affinis
ENSACIG00000006498	lsm7	77	97.938	ENSGACG00000010390	lsm7	94	97.938	Gasterosteus_aculeatus
ENSACIG00000006498	lsm7	78	94.898	ENSGGOG00000010172	LSM7	95	94.898	Gorilla_gorilla
ENSACIG00000006498	lsm7	78	100.000	ENSHBUG00000004616	lsm7	95	100.000	Haplochromis_burtoni
ENSACIG00000006498	lsm7	78	94.898	ENSHGLG00000010587	LSM7	95	94.898	Heterocephalus_glaber_female
ENSACIG00000006498	lsm7	78	94.898	ENSHGLG00100000852	LSM7	95	94.898	Heterocephalus_glaber_male
ENSACIG00000006498	lsm7	77	100.000	ENSHCOG00000020252	lsm7	96	100.000	Hippocampus_comes
ENSACIG00000006498	lsm7	78	94.898	ENSIPUG00000024724	lsm7	95	94.898	Ictalurus_punctatus
ENSACIG00000006498	lsm7	77	94.845	ENSSTOG00000028372	LSM7	95	94.845	Ictidomys_tridecemlineatus
ENSACIG00000006498	lsm7	77	93.814	ENSJJAG00000001936	Lsm7	94	93.814	Jaculus_jaculus
ENSACIG00000006498	lsm7	78	97.959	ENSKMAG00000022151	lsm7	95	97.959	Kryptolebias_marmoratus
ENSACIG00000006498	lsm7	78	97.959	ENSLBEG00000005203	lsm7	95	97.959	Labrus_bergylta
ENSACIG00000006498	lsm7	71	95.506	ENSLACG00000015700	LSM7	94	94.845	Latimeria_chalumnae
ENSACIG00000006498	lsm7	77	95.876	ENSLOCG00000004356	lsm7	94	95.876	Lepisosteus_oculatus
ENSACIG00000006498	lsm7	77	94.845	ENSLAFG00000029302	LSM7	94	94.845	Loxodonta_africana
ENSACIG00000006498	lsm7	78	94.898	ENSMFAG00000044572	LSM7	95	94.898	Macaca_fascicularis
ENSACIG00000006498	lsm7	78	94.898	ENSMMUG00000000452	LSM7	95	94.898	Macaca_mulatta
ENSACIG00000006498	lsm7	78	94.898	ENSMNEG00000004393	LSM7	95	94.898	Macaca_nemestrina
ENSACIG00000006498	lsm7	78	94.898	ENSMLEG00000030852	LSM7	96	94.845	Mandrillus_leucophaeus
ENSACIG00000006498	lsm7	78	100.000	ENSMAMG00000005410	lsm7	95	100.000	Mastacembelus_armatus
ENSACIG00000006498	lsm7	78	100.000	ENSMZEG00005028055	lsm7	95	100.000	Maylandia_zebra
ENSACIG00000006498	lsm7	78	95.918	ENSMGAG00000000750	LSM7	84	95.918	Meleagris_gallopavo
ENSACIG00000006498	lsm7	78	93.878	ENSMAUG00000009276	Lsm7	95	93.878	Mesocricetus_auratus
ENSACIG00000006498	lsm7	78	94.898	ENSMICG00000028619	-	95	94.898	Microcebus_murinus
ENSACIG00000006498	lsm7	78	94.898	ENSMICG00000009988	-	95	94.898	Microcebus_murinus
ENSACIG00000006498	lsm7	78	93.878	ENSMOCG00000016925	Lsm7	95	93.878	Microtus_ochrogaster
ENSACIG00000006498	lsm7	78	98.980	ENSMMOG00000019645	lsm7	93	98.980	Mola_mola
ENSACIG00000006498	lsm7	78	94.898	ENSMODG00000004722	LSM7	95	94.898	Monodelphis_domestica
ENSACIG00000006498	lsm7	78	100.000	ENSMALG00000014511	lsm7	75	100.000	Monopterus_albus
ENSACIG00000006498	lsm7	78	92.857	MGP_CAROLIEiJ_G0015607	Lsm7	95	92.857	Mus_caroli
ENSACIG00000006498	lsm7	78	92.857	ENSMUSG00000035215	Lsm7	95	92.857	Mus_musculus
ENSACIG00000006498	lsm7	78	92.857	MGP_PahariEiJ_G0031020	Lsm7	95	92.857	Mus_pahari
ENSACIG00000006498	lsm7	78	92.857	MGP_SPRETEiJ_G0016425	Lsm7	95	92.857	Mus_spretus
ENSACIG00000006498	lsm7	77	94.845	ENSMLUG00000013097	-	94	94.845	Myotis_lucifugus
ENSACIG00000006498	lsm7	81	86.275	ENSMLUG00000024002	-	94	86.275	Myotis_lucifugus
ENSACIG00000006498	lsm7	78	92.857	ENSNGAG00000021637	Lsm7	95	92.857	Nannospalax_galili
ENSACIG00000006498	lsm7	77	100.000	ENSNBRG00000001237	-	78	100.000	Neolamprologus_brichardi
ENSACIG00000006498	lsm7	77	100.000	ENSNBRG00000015770	lsm7	84	100.000	Neolamprologus_brichardi
ENSACIG00000006498	lsm7	78	94.898	ENSNLEG00000002265	LSM7	95	94.898	Nomascus_leucogenys
ENSACIG00000006498	lsm7	78	87.755	ENSODEG00000018769	-	95	87.755	Octodon_degus
ENSACIG00000006498	lsm7	78	94.898	ENSODEG00000013590	-	95	94.898	Octodon_degus
ENSACIG00000006498	lsm7	78	74.490	ENSODEG00000008190	-	95	74.490	Octodon_degus
ENSACIG00000006498	lsm7	78	100.000	ENSONIG00000001801	lsm7	84	100.000	Oreochromis_niloticus
ENSACIG00000006498	lsm7	78	98.980	ENSORLG00000023951	lsm7	95	98.980	Oryzias_latipes
ENSACIG00000006498	lsm7	78	98.980	ENSORLG00020022226	lsm7	95	98.980	Oryzias_latipes_hni
ENSACIG00000006498	lsm7	77	98.969	ENSORLG00015020044	lsm7	90	98.969	Oryzias_latipes_hsok
ENSACIG00000006498	lsm7	78	98.980	ENSOMEG00000012806	lsm7	95	98.980	Oryzias_melastigma
ENSACIG00000006498	lsm7	78	83.673	ENSOGAG00000024373	-	95	83.673	Otolemur_garnettii
ENSACIG00000006498	lsm7	77	93.814	ENSOGAG00000000144	-	95	93.814	Otolemur_garnettii
ENSACIG00000006498	lsm7	77	94.845	ENSOARG00000014013	LSM7	94	94.845	Ovis_aries
ENSACIG00000006498	lsm7	78	94.898	ENSPPAG00000026500	LSM7	95	94.898	Pan_paniscus
ENSACIG00000006498	lsm7	78	93.878	ENSPPRG00000008624	LSM7	95	93.878	Panthera_pardus
ENSACIG00000006498	lsm7	71	94.382	ENSPTIG00000016252	LSM7	94	93.814	Panthera_tigris_altaica
ENSACIG00000006498	lsm7	78	94.898	ENSPTRG00000010233	LSM7	95	94.898	Pan_troglodytes
ENSACIG00000006498	lsm7	78	94.898	ENSPANG00000020668	LSM7	95	94.898	Papio_anubis
ENSACIG00000006498	lsm7	78	96.939	ENSPKIG00000011325	lsm7	95	96.939	Paramormyrops_kingsleyae
ENSACIG00000006498	lsm7	71	96.629	ENSPSIG00000017149	LSM7	85	95.876	Pelodiscus_sinensis
ENSACIG00000006498	lsm7	78	98.980	ENSPMGG00000006498	lsm7	95	98.980	Periophthalmus_magnuspinnatus
ENSACIG00000006498	lsm7	78	94.898	ENSPCIG00000030454	LSM7	95	94.898	Phascolarctos_cinereus
ENSACIG00000006498	lsm7	77	97.938	ENSPFOG00000012467	lsm7	86	97.938	Poecilia_formosa
ENSACIG00000006498	lsm7	78	96.939	ENSPLAG00000000252	lsm7	91	96.939	Poecilia_latipinna
ENSACIG00000006498	lsm7	78	96.939	ENSPMEG00000000587	lsm7	91	96.939	Poecilia_mexicana
ENSACIG00000006498	lsm7	63	76.250	ENSPREG00000016718	lsm7	64	76.250	Poecilia_reticulata
ENSACIG00000006498	lsm7	78	94.898	ENSPCOG00000017177	LSM7	95	94.898	Propithecus_coquereli
ENSACIG00000006498	lsm7	78	100.000	ENSPNYG00000006938	lsm7	95	100.000	Pundamilia_nyererei
ENSACIG00000006498	lsm7	78	96.939	ENSPNAG00000010141	lsm7	95	96.939	Pygocentrus_nattereri
ENSACIG00000006498	lsm7	78	93.878	ENSRNOG00000019552	Lsm7	95	93.878	Rattus_norvegicus
ENSACIG00000006498	lsm7	78	94.898	ENSRBIG00000035978	LSM7	95	94.898	Rhinopithecus_bieti
ENSACIG00000006498	lsm7	78	94.898	ENSRROG00000034044	LSM7	95	94.898	Rhinopithecus_roxellana
ENSACIG00000006498	lsm7	68	48.315	YNL147W	-	77	48.315	Saccharomyces_cerevisiae
ENSACIG00000006498	lsm7	78	94.898	ENSSBOG00000034899	LSM7	95	94.898	Saimiri_boliviensis_boliviensis
ENSACIG00000006498	lsm7	78	94.898	ENSSFOG00015006728	lsm7	95	94.898	Scleropages_formosus
ENSACIG00000006498	lsm7	77	98.969	ENSSMAG00000004195	lsm7	89	98.969	Scophthalmus_maximus
ENSACIG00000006498	lsm7	78	98.980	ENSSDUG00000001863	lsm7	95	98.980	Seriola_dumerili
ENSACIG00000006498	lsm7	78	98.980	ENSSLDG00000016339	lsm7	95	98.980	Seriola_lalandi_dorsalis
ENSACIG00000006498	lsm7	78	98.980	ENSSPAG00000015221	lsm7	95	98.980	Stegastes_partitus
ENSACIG00000006498	lsm7	77	94.845	ENSSSCG00000013463	LSM7	95	94.845	Sus_scrofa
ENSACIG00000006498	lsm7	77	95.876	ENSTGUG00000000067	LSM7	96	95.876	Taeniopygia_guttata
ENSACIG00000006498	lsm7	78	96.939	ENSTRUG00000022913	lsm7	95	96.939	Takifugu_rubripes
ENSACIG00000006498	lsm7	78	96.939	ENSTNIG00000015525	lsm7	95	96.939	Tetraodon_nigroviridis
ENSACIG00000006498	lsm7	52	83.333	ENSTBEG00000016602	LSM7	94	83.333	Tupaia_belangeri
ENSACIG00000006498	lsm7	77	93.814	ENSUAMG00000000912	LSM7	81	93.814	Ursus_americanus
ENSACIG00000006498	lsm7	71	94.382	ENSUMAG00000006556	LSM7	76	93.814	Ursus_maritimus
ENSACIG00000006498	lsm7	53	95.522	ENSVVUG00000002640	LSM7	61	95.522	Vulpes_vulpes
ENSACIG00000006498	lsm7	77	94.845	ENSXETG00000022166	lsm7	96	94.845	Xenopus_tropicalis
ENSACIG00000006498	lsm7	78	96.939	ENSXCOG00000002572	lsm7	96	96.939	Xiphophorus_couchianus
ENSACIG00000006498	lsm7	78	97.959	ENSXMAG00000018630	lsm7	95	97.959	Xiphophorus_maculatus