EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006540 (Gene tree)
Gene ID: -
Gene Symbol: zgc:63587
Alias: -
Full Name: zgc:63587
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 17113 bases
Position: chrCCOE01000365.1:4876586-4893698
Accession: ZDB-GENE-040426-1175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008324	MMR_HSR1	PF01926.23	6.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008574	-	930	-	ENSACIP00000008324	309 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006540	zgc:63587	97	42.763	ENSACIG00000009699	sept8a	71	42.763
ENSACIG00000006540	zgc:63587	85	49.624	ENSACIG00000008111	sept9a	77	49.624
ENSACIG00000006540	zgc:63587	85	59.245	ENSACIG00000009559	sept7b	80	53.605
ENSACIG00000006540	zgc:63587	87	91.450	ENSACIG00000021718	sept2	78	91.450
ENSACIG00000006540	zgc:63587	88	63.736	ENSACIG00000000964	-	89	60.131
ENSACIG00000006540	zgc:63587	98	57.053	ENSACIG00000006554	sept5a	89	57.053
ENSACIG00000006540	zgc:63587	97	40.264	ENSACIG00000013682	sept6	61	42.701
ENSACIG00000006540	zgc:63587	98	60.656	ENSACIG00000018748	sept4a	83	60.656
ENSACIG00000006540	zgc:63587	87	49.632	ENSACIG00000001821	sept3	67	49.632
ENSACIG00000006540	zgc:63587	100	52.830	ENSACIG00000013333	-	78	52.830
ENSACIG00000006540	zgc:63587	97	54.487	ENSACIG00000012690	sept15	79	54.430
ENSACIG00000006540	zgc:63587	97	43.894	ENSACIG00000006078	sept8b	68	43.894
ENSACIG00000006540	zgc:63587	90	65.827	ENSACIG00000002675	SEPT4	70	65.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006540	zgc:63587	100	99.029	ENSAPOG00000021616	zgc:63587	89	99.029	Acanthochromis_polyacanthus
ENSACIG00000006540	zgc:63587	100	98.058	ENSAOCG00000015026	zgc:63587	89	98.058	Amphiprion_ocellaris
ENSACIG00000006540	zgc:63587	100	98.058	ENSAPEG00000017625	zgc:63587	89	98.058	Amphiprion_percula
ENSACIG00000006540	zgc:63587	100	98.058	ENSATEG00000020519	zgc:63587	89	98.058	Anabas_testudineus
ENSACIG00000006540	zgc:63587	99	93.791	ENSACAG00000000754	-	88	93.791	Anolis_carolinensis
ENSACIG00000006540	zgc:63587	100	99.676	ENSACLG00000011287	zgc:63587	89	99.676	Astatotilapia_calliptera
ENSACIG00000006540	zgc:63587	99	97.386	ENSAMXG00000006164	zgc:63587	84	97.386	Astyanax_mexicanus
ENSACIG00000006540	zgc:63587	99	94.771	ENSCPBG00000010648	-	88	94.771	Chrysemys_picta_bellii
ENSACIG00000006540	zgc:63587	100	98.382	ENSCSEG00000019626	zgc:63587	89	98.382	Cynoglossus_semilaevis
ENSACIG00000006540	zgc:63587	100	98.382	ENSCVAG00000017959	zgc:63587	89	98.382	Cyprinodon_variegatus
ENSACIG00000006540	zgc:63587	64	92.965	ENSDARG00000017140	zgc:63587	72	92.965	Danio_rerio
ENSACIG00000006540	zgc:63587	100	97.735	ENSELUG00000009060	zgc:63587	89	97.735	Esox_lucius
ENSACIG00000006540	zgc:63587	99	94.118	ENSFALG00000008010	-	88	94.118	Ficedula_albicollis
ENSACIG00000006540	zgc:63587	100	97.411	ENSFHEG00000018583	zgc:63587	89	97.411	Fundulus_heteroclitus
ENSACIG00000006540	zgc:63587	100	96.764	ENSGMOG00000013563	zgc:63587	89	96.764	Gadus_morhua
ENSACIG00000006540	zgc:63587	99	94.771	ENSGALG00000001652	SEPT2L	88	94.771	Gallus_gallus
ENSACIG00000006540	zgc:63587	100	97.735	ENSGAFG00000000805	zgc:63587	89	97.735	Gambusia_affinis
ENSACIG00000006540	zgc:63587	100	97.411	ENSGACG00000005552	zgc:63587	89	97.411	Gasterosteus_aculeatus
ENSACIG00000006540	zgc:63587	99	94.771	ENSGAGG00000014380	-	88	94.771	Gopherus_agassizii
ENSACIG00000006540	zgc:63587	100	99.676	ENSHBUG00000013996	zgc:63587	89	99.676	Haplochromis_burtoni
ENSACIG00000006540	zgc:63587	100	98.382	ENSHCOG00000005893	zgc:63587	89	98.382	Hippocampus_comes
ENSACIG00000006540	zgc:63587	100	97.087	ENSKMAG00000003351	zgc:63587	89	97.087	Kryptolebias_marmoratus
ENSACIG00000006540	zgc:63587	100	97.735	ENSLBEG00000025452	zgc:63587	89	97.735	Labrus_bergylta
ENSACIG00000006540	zgc:63587	99	88.562	ENSLACG00000015335	zgc:63587	87	88.562	Latimeria_chalumnae
ENSACIG00000006540	zgc:63587	99	97.386	ENSLOCG00000001793	zgc:63587	88	97.386	Lepisosteus_oculatus
ENSACIG00000006540	zgc:63587	100	99.029	ENSMAMG00000014467	zgc:63587	89	99.029	Mastacembelus_armatus
ENSACIG00000006540	zgc:63587	100	99.676	ENSMZEG00005009713	zgc:63587	89	99.676	Maylandia_zebra
ENSACIG00000006540	zgc:63587	99	80.065	ENSMGAG00000001294	-	88	79.553	Meleagris_gallopavo
ENSACIG00000006540	zgc:63587	94	98.621	ENSMMOG00000011692	zgc:63587	83	98.621	Mola_mola
ENSACIG00000006540	zgc:63587	99	92.484	ENSMODG00000010193	-	83	92.484	Monodelphis_domestica
ENSACIG00000006540	zgc:63587	100	98.058	ENSMALG00000020157	zgc:63587	100	98.058	Monopterus_albus
ENSACIG00000006540	zgc:63587	100	99.676	ENSNBRG00000018582	-	89	99.676	Neolamprologus_brichardi
ENSACIG00000006540	zgc:63587	100	99.029	ENSONIG00000014408	zgc:63587	89	99.029	Oreochromis_niloticus
ENSACIG00000006540	zgc:63587	100	98.058	ENSORLG00000002669	zgc:63587	90	98.058	Oryzias_latipes
ENSACIG00000006540	zgc:63587	100	98.058	ENSORLG00020005356	zgc:63587	89	98.058	Oryzias_latipes_hni
ENSACIG00000006540	zgc:63587	100	98.058	ENSORLG00015015159	zgc:63587	89	98.058	Oryzias_latipes_hsok
ENSACIG00000006540	zgc:63587	100	98.058	ENSOMEG00000017925	zgc:63587	89	98.058	Oryzias_melastigma
ENSACIG00000006540	zgc:63587	99	97.386	ENSPKIG00000024604	zgc:63587	88	97.386	Paramormyrops_kingsleyae
ENSACIG00000006540	zgc:63587	99	93.791	ENSPSIG00000002946	-	88	93.791	Pelodiscus_sinensis
ENSACIG00000006540	zgc:63587	100	96.764	ENSPMGG00000018374	zgc:63587	99	96.764	Periophthalmus_magnuspinnatus
ENSACIG00000006540	zgc:63587	100	93.851	ENSPCIG00000025491	-	89	93.851	Phascolarctos_cinereus
ENSACIG00000006540	zgc:63587	100	98.058	ENSPFOG00000011730	zgc:63587	89	98.058	Poecilia_formosa
ENSACIG00000006540	zgc:63587	100	98.058	ENSPLAG00000018604	zgc:63587	89	98.058	Poecilia_latipinna
ENSACIG00000006540	zgc:63587	100	97.735	ENSPMEG00000004117	zgc:63587	89	97.735	Poecilia_mexicana
ENSACIG00000006540	zgc:63587	100	97.735	ENSPREG00000011612	zgc:63587	89	97.735	Poecilia_reticulata
ENSACIG00000006540	zgc:63587	100	99.353	ENSPNYG00000008409	zgc:63587	89	99.353	Pundamilia_nyererei
ENSACIG00000006540	zgc:63587	99	96.078	ENSPNAG00000000463	zgc:63587	78	96.552	Pygocentrus_nattereri
ENSACIG00000006540	zgc:63587	99	93.464	ENSSHAG00000011013	-	88	93.464	Sarcophilus_harrisii
ENSACIG00000006540	zgc:63587	99	97.712	ENSSFOG00015014108	zgc:63587	93	93.791	Scleropages_formosus
ENSACIG00000006540	zgc:63587	100	97.735	ENSSMAG00000006113	-	89	97.735	Scophthalmus_maximus
ENSACIG00000006540	zgc:63587	100	98.706	ENSSDUG00000002763	zgc:63587	86	98.706	Seriola_dumerili
ENSACIG00000006540	zgc:63587	100	98.706	ENSSLDG00000004826	zgc:63587	89	98.706	Seriola_lalandi_dorsalis
ENSACIG00000006540	zgc:63587	99	93.791	ENSSPUG00000015358	-	88	93.791	Sphenodon_punctatus
ENSACIG00000006540	zgc:63587	51	98.742	ENSSPAG00000000807	zgc:63587	51	98.742	Stegastes_partitus
ENSACIG00000006540	zgc:63587	100	99.029	ENSSPAG00000015654	-	90	99.029	Stegastes_partitus
ENSACIG00000006540	zgc:63587	99	93.791	ENSTGUG00000008445	-	88	93.791	Taeniopygia_guttata
ENSACIG00000006540	zgc:63587	100	97.735	ENSTRUG00000016492	zgc:63587	89	97.735	Takifugu_rubripes
ENSACIG00000006540	zgc:63587	100	97.411	ENSTNIG00000015927	zgc:63587	89	97.411	Tetraodon_nigroviridis
ENSACIG00000006540	zgc:63587	99	95.425	ENSXETG00000018605	sept2-a	87	95.425	Xenopus_tropicalis
ENSACIG00000006540	zgc:63587	95	96.259	ENSXCOG00000002678	zgc:63587	87	96.259	Xiphophorus_couchianus
ENSACIG00000006540	zgc:63587	100	97.735	ENSXMAG00000014718	zgc:63587	89	97.735	Xiphophorus_maculatus