EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000006635 (Gene tree)
Gene ID
-
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex%2C subunit 3a
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
8282 bases
Position
chrCCOE01000998.1:527712-535993
Accession
ZDB-GENE-040927-6
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000008642Not3PF04065.152.1e-9711
ENSACIP00000008635Not3PF04065.153.5e-9711
ENSACIP00000008605Not3PF04065.153.8e-9511
ENSACIP00000008642NOT2_3_5PF04153.183.8e-3911
ENSACIP00000008635NOT2_3_5PF04153.181.6e-3811
ENSACIP00000008605NOT2_3_5PF04153.182.6e-3711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000008862-2727-ENSACIP00000008605908 (aa)--
ENSACIT00000008893-2517-ENSACIP00000008635838 (aa)--
ENSACIT00000008901-1773-ENSACIP00000008642590 (aa)--
Gene Model
Click here to download ENSACIG00000006635's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006635's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000006635cnot3a9971.061ENSACIG00000003652cnot3b8992.411
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000006635cnot3a9993.162ENSG00000088038CNOT310093.814Homo_sapiens
ENSACIG00000006635cnot3a8085.593ENSAPOG00000015002cnot3b7689.493Acanthochromis_polyacanthus
ENSACIG00000006635cnot3a59100.000ENSAPOG00000015499CNOT384100.000Acanthochromis_polyacanthus
ENSACIG00000006635cnot3a8985.171ENSAMEG00000004528CNOT37689.474Ailuropoda_melanoleuca
ENSACIG00000006635cnot3a9478.947ENSAOCG00000018385-10067.763Amphiprion_ocellaris
ENSACIG00000006635cnot3a98100.000ENSAOCG00000023769cnot3a9986.851Amphiprion_ocellaris
ENSACIG00000006635cnot3a10095.951ENSAPEG00000006624cnot3a10089.376Amphiprion_percula
ENSACIG00000006635cnot3a9685.654ENSAPEG00000002640cnot3b8593.396Amphiprion_percula
ENSACIG00000006635cnot3a10094.737ENSATEG00000022737cnot3a10091.019Anabas_testudineus
ENSACIG00000006635cnot3a9394.444ENSATEG00000015777cnot3b7694.444Anabas_testudineus
ENSACIG00000006635cnot3a8893.162ENSACAG00000016085CNOT38889.145Anolis_carolinensis
ENSACIG00000006635cnot3a9993.162ENSANAG00000025756CNOT37889.145Aotus_nancymaae
ENSACIG00000006635cnot3a10097.593ENSACLG00000021136cnot3a10097.593Astatotilapia_calliptera
ENSACIG00000006635cnot3a10095.726ENSACLG00000016702cnot3b6795.726Astatotilapia_calliptera
ENSACIG00000006635cnot3a9894.643ENSAMXG00000009447cnot3b7892.857Astyanax_mexicanus
ENSACIG00000006635cnot3a9897.009ENSAMXG00000012359cnot3a10072.270Astyanax_mexicanus
ENSACIG00000006635cnot3a10084.791ENSBTAG00000014900CNOT37689.145Bos_taurus
ENSACIG00000006635cnot3a7754.696WBGene00003826ntl-39951.256Caenorhabditis_elegans
ENSACIG00000006635cnot3a9993.162ENSCJAG00000001094CNOT37589.145Callithrix_jacchus
ENSACIG00000006635cnot3a8984.791ENSCAFG00000002699CNOT37589.145Canis_familiaris
ENSACIG00000006635cnot3a8984.791ENSCAFG00020018359CNOT37589.145Canis_lupus_dingo
ENSACIG00000006635cnot3a8490.558ENSCHIG00000015302CNOT37787.667Capra_hircus
ENSACIG00000006635cnot3a9993.162ENSTSYG00000008058CNOT37689.145Carlito_syrichta
ENSACIG00000006635cnot3a9993.162ENSCAPG00000009533CNOT37589.145Cavia_aperea
ENSACIG00000006635cnot3a9993.162ENSCPOG00000020741CNOT37589.145Cavia_porcellus
ENSACIG00000006635cnot3a9993.162ENSCCAG00000036290CNOT37889.145Cebus_capucinus
ENSACIG00000006635cnot3a9993.162ENSCATG00000030324CNOT37589.145Cercocebus_atys
ENSACIG00000006635cnot3a9993.162ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSACIG00000006635cnot3a9993.162ENSCSAG00000001900CNOT37589.145Chlorocebus_sabaeus
ENSACIG00000006635cnot3a9385.171ENSCPBG00000011655CNOT37589.145Chrysemys_picta_bellii
ENSACIG00000006635cnot3a10046.457ENSCING00000000293-7168.182Ciona_intestinalis
ENSACIG00000006635cnot3a9993.162ENSCANG00000013408CNOT37589.145Colobus_angolensis_palliatus
ENSACIG00000006635cnot3a8585.171ENSCGRG00001000855Cnot37589.474Cricetulus_griseus_chok1gshd
ENSACIG00000006635cnot3a9349.050ENSCGRG00000012929Cnot36769.302Cricetulus_griseus_crigri
ENSACIG00000006635cnot3a10094.737ENSCSEG00000003574cnot3a10091.558Cynoglossus_semilaevis
ENSACIG00000006635cnot3a10083.206ENSCSEG00000016892cnot3b6290.558Cynoglossus_semilaevis
ENSACIG00000006635cnot3a8293.243ENSCVAG00000022122cnot3b5591.026Cyprinodon_variegatus
ENSACIG00000006635cnot3a10098.718ENSCVAG00000008168cnot3a10084.026Cyprinodon_variegatus
ENSACIG00000006635cnot3a9394.444ENSDARG00000019842cnot3b7894.444Danio_rerio
ENSACIG00000006635cnot3a10075.216ENSDARG00000007135cnot3a10073.377Danio_rerio
ENSACIG00000006635cnot3a8493.162ENSDNOG00000045972CNOT37589.145Dasypus_novemcinctus
ENSACIG00000006635cnot3a8893.162ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSACIG00000006635cnot3a6968.421FBgn0033029Not35067.251Drosophila_melanogaster
ENSACIG00000006635cnot3a69100.000ENSETEG00000006305CNOT363100.000Echinops_telfairi
ENSACIG00000006635cnot3a8474.525ENSEBUG00000010437cnot3a6279.574Eptatretus_burgeri
ENSACIG00000006635cnot3a10084.791ENSEASG00005021591CNOT37589.145Equus_asinus_asinus
ENSACIG00000006635cnot3a10084.791ENSECAG00000023181CNOT37589.145Equus_caballus
ENSACIG00000006635cnot3a9892.735ENSELUG00000000953cnot3b7691.597Esox_lucius
ENSACIG00000006635cnot3a9995.299ENSELUG00000014743cnot3a10079.638Esox_lucius
ENSACIG00000006635cnot3a9993.162ENSFCAG00000014042CNOT37689.145Felis_catus
ENSACIG00000006635cnot3a10097.468ENSFHEG00000023166cnot3a9798.729Fundulus_heteroclitus
ENSACIG00000006635cnot3a8293.243ENSFHEG00000001696cnot3b7689.627Fundulus_heteroclitus
ENSACIG00000006635cnot3a8989.035ENSGMOG00000005365cnot3a9878.960Gadus_morhua
ENSACIG00000006635cnot3a7891.441ENSGAFG00000003459cnot3b7887.967Gambusia_affinis
ENSACIG00000006635cnot3a10092.913ENSGAFG00000013094cnot3a10086.980Gambusia_affinis
ENSACIG00000006635cnot3a9482.442ENSGACG00000011489cnot3a9882.326Gasterosteus_aculeatus
ENSACIG00000006635cnot3a9962.222ENSGAGG00000012677CNOT38088.980Gopherus_agassizii
ENSACIG00000006635cnot3a9993.162ENSGGOG00000012996CNOT37889.145Gorilla_gorilla
ENSACIG00000006635cnot3a9690.094ENSHBUG00000019699cnot3b5090.094Haplochromis_burtoni
ENSACIG00000006635cnot3a10097.702ENSHBUG00000005275cnot3a10097.702Haplochromis_burtoni
ENSACIG00000006635cnot3a9993.162ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSACIG00000006635cnot3a8483.846ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSACIG00000006635cnot3a100100.000ENSHCOG00000020968cnot3a10083.860Hippocampus_comes
ENSACIG00000006635cnot3a9995.726ENSIPUG00000009046cnot3b7295.726Ictalurus_punctatus
ENSACIG00000006635cnot3a9994.872ENSIPUG00000000167cnot310066.270Ictalurus_punctatus
ENSACIG00000006635cnot3a9993.162ENSSTOG00000028248CNOT37589.145Ictidomys_tridecemlineatus
ENSACIG00000006635cnot3a8785.171ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSACIG00000006635cnot3a10063.274ENSKMAG00000018723cnot3b6794.444Kryptolebias_marmoratus
ENSACIG00000006635cnot3a100100.000ENSKMAG00000004863cnot3a10088.865Kryptolebias_marmoratus
ENSACIG00000006635cnot3a9587.891ENSLBEG00000018278cnot3b7892.437Labrus_bergylta
ENSACIG00000006635cnot3a9093.117ENSLBEG00000017296cnot3a9695.982Labrus_bergylta
ENSACIG00000006635cnot3a8884.351ENSLACG00000009742CNOT38887.500Latimeria_chalumnae
ENSACIG00000006635cnot3a6894.872ENSLOCG00000000005cnot3b7991.758Lepisosteus_oculatus
ENSACIG00000006635cnot3a9992.340ENSLAFG00000022133CNOT36892.340Loxodonta_africana
ENSACIG00000006635cnot3a9993.162ENSMFAG00000040073CNOT37589.145Macaca_fascicularis
ENSACIG00000006635cnot3a9993.162ENSMMUG00000009698CNOT310095.098Macaca_mulatta
ENSACIG00000006635cnot3a9993.162ENSMNEG00000036750CNOT37589.145Macaca_nemestrina
ENSACIG00000006635cnot3a9993.162ENSMLEG00000036579CNOT37589.145Mandrillus_leucophaeus
ENSACIG00000006635cnot3a10094.737ENSMAMG00000019397cnot3a10089.278Mastacembelus_armatus
ENSACIG00000006635cnot3a7994.017ENSMAMG00000019357cnot3b7692.857Mastacembelus_armatus
ENSACIG00000006635cnot3a10097.593ENSMZEG00005016304cnot3a10097.593Maylandia_zebra
ENSACIG00000006635cnot3a10095.726ENSMZEG00005002466cnot3b6695.726Maylandia_zebra
ENSACIG00000006635cnot3a9993.590ENSMAUG00000014996Cnot37589.474Mesocricetus_auratus
ENSACIG00000006635cnot3a8984.791ENSMICG00000002370CNOT37589.145Microcebus_murinus
ENSACIG00000006635cnot3a10094.017ENSMMOG00000016446cnot3a10090.979Mola_mola
ENSACIG00000006635cnot3a10069.572ENSMMOG00000013086cnot3b8886.831Mola_mola
ENSACIG00000006635cnot3a8093.162ENSMODG00000004066CNOT36993.162Monodelphis_domestica
ENSACIG00000006635cnot3a8382.353ENSMALG00000004936cnot3b7687.075Monopterus_albus
ENSACIG00000006635cnot3a10094.737ENSMALG00000009204cnot3a10089.047Monopterus_albus
ENSACIG00000006635cnot3a9993.590MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSACIG00000006635cnot3a9993.590ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSACIG00000006635cnot3a9993.590MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSACIG00000006635cnot3a9993.590MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSACIG00000006635cnot3a8984.791ENSMPUG00000010352CNOT37589.145Mustela_putorius_furo
ENSACIG00000006635cnot3a8584.791ENSNGAG00000013266Cnot37289.145Nannospalax_galili
ENSACIG00000006635cnot3a9789.823ENSNBRG00000003336cnot3b8689.823Neolamprologus_brichardi
ENSACIG00000006635cnot3a10095.951ENSNBRG00000002401cnot3a10095.624Neolamprologus_brichardi
ENSACIG00000006635cnot3a9993.162ENSNLEG00000006272CNOT37489.145Nomascus_leucogenys
ENSACIG00000006635cnot3a53100.000ENSMEUG00000002952CNOT366100.000Notamacropus_eugenii
ENSACIG00000006635cnot3a68100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSACIG00000006635cnot3a9993.162ENSODEG00000000705CNOT310088.608Octodon_degus
ENSACIG00000006635cnot3a10097.155ENSONIG00000006568cnot3a10097.155Oreochromis_niloticus
ENSACIG00000006635cnot3a8095.299ENSONIG00000007047cnot3b7594.118Oreochromis_niloticus
ENSACIG00000006635cnot3a8984.791ENSOCUG00000007691CNOT37689.145Oryctolagus_cuniculus
ENSACIG00000006635cnot3a7894.690ENSORLG00000005982cnot3b8593.277Oryzias_latipes
ENSACIG00000006635cnot3a10095.547ENSORLG00000011174cnot3a10086.324Oryzias_latipes
ENSACIG00000006635cnot3a10095.547ENSORLG00020008009cnot3a10086.980Oryzias_latipes_hni
ENSACIG00000006635cnot3a7894.690ENSORLG00020005779cnot3b8493.277Oryzias_latipes_hni
ENSACIG00000006635cnot3a10095.547ENSORLG00015013729cnot3a10086.980Oryzias_latipes_hsok
ENSACIG00000006635cnot3a9193.277ENSORLG00015019021cnot3b8493.277Oryzias_latipes_hsok
ENSACIG00000006635cnot3a9795.133ENSOMEG00000015557cnot3b6894.872Oryzias_melastigma
ENSACIG00000006635cnot3a10095.547ENSOMEG00000010309cnot3a10087.527Oryzias_melastigma
ENSACIG00000006635cnot3a9993.162ENSOGAG00000006945CNOT37589.145Otolemur_garnettii
ENSACIG00000006635cnot3a7691.444ENSOARG00000002981CNOT37091.444Ovis_aries
ENSACIG00000006635cnot3a9993.162ENSPPAG00000002748CNOT37889.145Pan_paniscus
ENSACIG00000006635cnot3a9993.162ENSPPRG00000011705CNOT37689.145Panthera_pardus
ENSACIG00000006635cnot3a10069.355ENSPTIG00000008781CNOT39689.262Panthera_tigris_altaica
ENSACIG00000006635cnot3a9993.162ENSPTRG00000011444CNOT37889.145Pan_troglodytes
ENSACIG00000006635cnot3a9993.162ENSPTRG00000046717-7889.145Pan_troglodytes
ENSACIG00000006635cnot3a9993.162ENSPANG00000009375CNOT37589.145Papio_anubis
ENSACIG00000006635cnot3a9995.299ENSPKIG00000011733CNOT37995.299Paramormyrops_kingsleyae
ENSACIG00000006635cnot3a9394.872ENSPKIG00000015967-8794.894Paramormyrops_kingsleyae
ENSACIG00000006635cnot3a9293.458ENSPMGG00000022539cnot3b5993.458Periophthalmus_magnuspinnatus
ENSACIG00000006635cnot3a5194.737ENSPMGG00000012037cnot3a59100.000Periophthalmus_magnuspinnatus
ENSACIG00000006635cnot3a9993.590ENSPEMG00000024185Cnot37589.474Peromyscus_maniculatus_bairdii
ENSACIG00000006635cnot3a8492.735ENSPCIG00000023018CNOT39088.816Phascolarctos_cinereus
ENSACIG00000006635cnot3a8591.441ENSPFOG00000007168cnot3b6789.700Poecilia_formosa
ENSACIG00000006635cnot3a10099.145ENSPFOG00000008693cnot3a9296.358Poecilia_formosa
ENSACIG00000006635cnot3a10099.145ENSPLAG00000013324cnot3a10085.558Poecilia_latipinna
ENSACIG00000006635cnot3a9391.441ENSPLAG00000013457cnot3b6789.700Poecilia_latipinna
ENSACIG00000006635cnot3a9391.441ENSPMEG00000010184cnot3b6789.700Poecilia_mexicana
ENSACIG00000006635cnot3a10099.145ENSPMEG00000017718cnot3a10085.871Poecilia_mexicana
ENSACIG00000006635cnot3a9474.163ENSPREG00000000662cnot3b6982.700Poecilia_reticulata
ENSACIG00000006635cnot3a10098.718ENSPREG00000007592cnot3a9998.718Poecilia_reticulata
ENSACIG00000006635cnot3a9992.735ENSPPYG00000010372CNOT37588.816Pongo_abelii
ENSACIG00000006635cnot3a6092.735ENSPCAG00000011999CNOT35691.525Procavia_capensis
ENSACIG00000006635cnot3a8993.162ENSPCOG00000017673CNOT37789.145Propithecus_coquereli
ENSACIG00000006635cnot3a10084.351ENSPVAG00000015564CNOT37088.816Pteropus_vampyrus
ENSACIG00000006635cnot3a10097.593ENSPNYG00000002282cnot3a10097.593Pundamilia_nyererei
ENSACIG00000006635cnot3a9994.397ENSPNYG00000003358cnot3b5094.397Pundamilia_nyererei
ENSACIG00000006635cnot3a10094.017ENSPNAG00000027459cnot3b6994.017Pygocentrus_nattereri
ENSACIG00000006635cnot3a9996.581ENSPNAG00000017679cnot3a9795.798Pygocentrus_nattereri
ENSACIG00000006635cnot3a9993.590ENSRNOG00000053234Cnot37589.474Rattus_norvegicus
ENSACIG00000006635cnot3a9993.162ENSRBIG00000031025CNOT37589.145Rhinopithecus_bieti
ENSACIG00000006635cnot3a9993.162ENSRROG00000003872CNOT37689.145Rhinopithecus_roxellana
ENSACIG00000006635cnot3a9993.162ENSSBOG00000030268CNOT37889.145Saimiri_boliviensis_boliviensis
ENSACIG00000006635cnot3a9694.444ENSSFOG00015000248cnot38492.857Scleropages_formosus
ENSACIG00000006635cnot3a10095.299ENSSFOG00015019203-7095.299Scleropages_formosus
ENSACIG00000006635cnot3a10094.332ENSSMAG00000013235cnot3a10090.632Scophthalmus_maximus
ENSACIG00000006635cnot3a8093.162ENSSMAG00000016031cnot3b7792.017Scophthalmus_maximus
ENSACIG00000006635cnot3a8094.017ENSSDUG00000003428cnot3b7692.857Seriola_dumerili
ENSACIG00000006635cnot3a10099.573ENSSDUG00000008181cnot3a10099.573Seriola_dumerili
ENSACIG00000006635cnot3a9595.547ENSSLDG00000014733cnot3a9992.404Seriola_lalandi_dorsalis
ENSACIG00000006635cnot3a8094.017ENSSLDG00000014376cnot3b7692.857Seriola_lalandi_dorsalis
ENSACIG00000006635cnot3a8893.162ENSSPUG00000008510CNOT38889.145Sphenodon_punctatus
ENSACIG00000006635cnot3a9494.872ENSSPAG00000001429cnot3b7694.872Stegastes_partitus
ENSACIG00000006635cnot3a9795.951ENSSPAG00000003858cnot3a9893.076Stegastes_partitus
ENSACIG00000006635cnot3a10084.791ENSSSCG00000003264CNOT37589.145Sus_scrofa
ENSACIG00000006635cnot3a10093.522ENSTRUG00000015732cnot3a10089.266Takifugu_rubripes
ENSACIG00000006635cnot3a9096.639ENSTNIG00000008082cnot3a10083.796Tetraodon_nigroviridis
ENSACIG00000006635cnot3a7191.453ENSTNIG00000005663cnot3b5291.453Tetraodon_nigroviridis
ENSACIG00000006635cnot3a5793.233ENSTBEG00000009620-5492.481Tupaia_belangeri
ENSACIG00000006635cnot3a8985.171ENSUAMG00000005234CNOT37589.474Ursus_americanus
ENSACIG00000006635cnot3a10066.834ENSUMAG00000010934CNOT38993.277Ursus_maritimus
ENSACIG00000006635cnot3a8493.162ENSVVUG00000008239CNOT37489.145Vulpes_vulpes
ENSACIG00000006635cnot3a8291.064ENSXETG00000003166cnot38888.350Xenopus_tropicalis
ENSACIG00000006635cnot3a10099.145ENSXCOG00000019460cnot3a9798.729Xiphophorus_couchianus
ENSACIG00000006635cnot3a7991.441ENSXCOG00000018976cnot3b6189.316Xiphophorus_couchianus
ENSACIG00000006635cnot3a10099.145ENSXMAG00000012273cnot3a10085.120Xiphophorus_maculatus
ENSACIG00000006635cnot3a8591.441ENSXMAG00000014176cnot3b6089.316Xiphophorus_maculatus

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