EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006696 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8039 bases
Position: chrCCOE01001675.1:1315501-1323539
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008601	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSACIP00000008579	MMR_HSR1	PF01926.23	6.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000008857	-	1323	-	ENSACIP00000008601	441 (aa)	-	-
ENSACIT00000008833	-	1251	-	ENSACIP00000008579	416 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006696	si:ch211-11k18.4	99	57.871	ENSACIG00000017719	si:dkey-98f17.5	100	57.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006696	si:ch211-11k18.4	99	58.537	ENSAPOG00000010378	si:dkey-98f17.5	100	58.537	Acanthochromis_polyacanthus
ENSACIG00000006696	si:ch211-11k18.4	100	88.470	ENSAPOG00000018833	si:ch211-11k18.4	99	88.470	Acanthochromis_polyacanthus
ENSACIG00000006696	si:ch211-11k18.4	99	58.758	ENSAOCG00000008661	si:dkey-98f17.5	100	58.758	Amphiprion_ocellaris
ENSACIG00000006696	si:ch211-11k18.4	99	88.444	ENSAOCG00000014284	si:ch211-11k18.4	99	88.444	Amphiprion_ocellaris
ENSACIG00000006696	si:ch211-11k18.4	99	58.758	ENSAPEG00000022447	si:dkey-98f17.5	100	58.758	Amphiprion_percula
ENSACIG00000006696	si:ch211-11k18.4	99	88.222	ENSAPEG00000014910	si:ch211-11k18.4	99	88.222	Amphiprion_percula
ENSACIG00000006696	si:ch211-11k18.4	99	86.000	ENSATEG00000004775	si:ch211-11k18.4	99	86.000	Anabas_testudineus
ENSACIG00000006696	si:ch211-11k18.4	99	58.758	ENSATEG00000007188	si:dkey-98f17.5	100	58.758	Anabas_testudineus
ENSACIG00000006696	si:ch211-11k18.4	99	63.677	ENSACAG00000028632	-	98	63.677	Anolis_carolinensis
ENSACIG00000006696	si:ch211-11k18.4	100	91.796	ENSACLG00000007907	si:ch211-11k18.4	99	91.796	Astatotilapia_calliptera
ENSACIG00000006696	si:ch211-11k18.4	99	58.758	ENSACLG00000001308	si:dkey-98f17.5	100	58.758	Astatotilapia_calliptera
ENSACIG00000006696	si:ch211-11k18.4	99	79.556	ENSAMXG00000017817	si:ch211-11k18.4	99	79.556	Astyanax_mexicanus
ENSACIG00000006696	si:ch211-11k18.4	99	59.161	ENSAMXG00000001190	si:dkey-98f17.5	100	59.161	Astyanax_mexicanus
ENSACIG00000006696	si:ch211-11k18.4	83	59.524	ENSCING00000020807	-	99	59.524	Ciona_intestinalis
ENSACIG00000006696	si:ch211-11k18.4	99	57.080	ENSCSAVG00000009987	-	100	57.080	Ciona_savignyi
ENSACIG00000006696	si:ch211-11k18.4	99	58.315	ENSCSEG00000017512	si:dkey-98f17.5	94	60.442	Cynoglossus_semilaevis
ENSACIG00000006696	si:ch211-11k18.4	99	82.183	ENSCSEG00000017661	si:ch211-11k18.4	99	82.183	Cynoglossus_semilaevis
ENSACIG00000006696	si:ch211-11k18.4	99	87.333	ENSCVAG00000015346	si:ch211-11k18.4	99	87.333	Cyprinodon_variegatus
ENSACIG00000006696	si:ch211-11k18.4	99	58.537	ENSCVAG00000011351	si:dkey-98f17.5	100	58.537	Cyprinodon_variegatus
ENSACIG00000006696	si:ch211-11k18.4	98	59.910	ENSDARG00000068863	si:dkey-98f17.5	100	59.910	Danio_rerio
ENSACIG00000006696	si:ch211-11k18.4	99	81.111	ENSDARG00000087869	si:ch211-11k18.4	100	90.306	Danio_rerio
ENSACIG00000006696	si:ch211-11k18.4	80	57.735	ENSEBUG00000007620	si:dkey-98f17.5	97	57.735	Eptatretus_burgeri
ENSACIG00000006696	si:ch211-11k18.4	99	57.743	ENSELUG00000003365	si:dkey-98f17.5	100	57.743	Esox_lucius
ENSACIG00000006696	si:ch211-11k18.4	99	86.889	ENSFHEG00000019820	si:ch211-11k18.4	99	86.889	Fundulus_heteroclitus
ENSACIG00000006696	si:ch211-11k18.4	99	58.537	ENSFHEG00000012744	si:dkey-98f17.5	100	58.537	Fundulus_heteroclitus
ENSACIG00000006696	si:ch211-11k18.4	90	75.495	ENSGMOG00000003492	si:ch211-11k18.4	99	75.495	Gadus_morhua
ENSACIG00000006696	si:ch211-11k18.4	99	85.333	ENSGAFG00000005677	si:ch211-11k18.4	99	85.333	Gambusia_affinis
ENSACIG00000006696	si:ch211-11k18.4	99	58.315	ENSGAFG00000012362	si:dkey-98f17.5	89	58.315	Gambusia_affinis
ENSACIG00000006696	si:ch211-11k18.4	90	86.139	ENSGACG00000013134	si:ch211-11k18.4	99	86.139	Gasterosteus_aculeatus
ENSACIG00000006696	si:ch211-11k18.4	63	74.231	ENSGACG00000009399	si:dkey-98f17.5	100	74.231	Gasterosteus_aculeatus
ENSACIG00000006696	si:ch211-11k18.4	99	58.980	ENSHBUG00000008331	si:dkey-98f17.5	100	58.980	Haplochromis_burtoni
ENSACIG00000006696	si:ch211-11k18.4	100	92.018	ENSHBUG00000020638	si:ch211-11k18.4	99	92.018	Haplochromis_burtoni
ENSACIG00000006696	si:ch211-11k18.4	99	84.667	ENSHCOG00000014773	si:ch211-11k18.4	99	84.667	Hippocampus_comes
ENSACIG00000006696	si:ch211-11k18.4	99	56.278	ENSHCOG00000016505	si:dkey-98f17.5	98	55.830	Hippocampus_comes
ENSACIG00000006696	si:ch211-11k18.4	99	58.643	ENSIPUG00000019981	si:dkey-98f17.5	99	57.576	Ictalurus_punctatus
ENSACIG00000006696	si:ch211-11k18.4	90	67.079	ENSIPUG00000016694	si:ch211-11k18.4	84	68.930	Ictalurus_punctatus
ENSACIG00000006696	si:ch211-11k18.4	96	76.852	ENSIPUG00000016678	si:ch211-11k18.4	98	76.887	Ictalurus_punctatus
ENSACIG00000006696	si:ch211-11k18.4	99	86.444	ENSKMAG00000009327	si:ch211-11k18.4	99	86.444	Kryptolebias_marmoratus
ENSACIG00000006696	si:ch211-11k18.4	99	57.871	ENSKMAG00000014997	si:dkey-98f17.5	100	57.871	Kryptolebias_marmoratus
ENSACIG00000006696	si:ch211-11k18.4	99	57.650	ENSLBEG00000012756	si:dkey-98f17.5	100	57.871	Labrus_bergylta
ENSACIG00000006696	si:ch211-11k18.4	99	61.197	ENSLACG00000004899	-	99	60.754	Latimeria_chalumnae
ENSACIG00000006696	si:ch211-11k18.4	99	67.849	ENSLACG00000006280	si:ch211-11k18.4	99	69.401	Latimeria_chalumnae
ENSACIG00000006696	si:ch211-11k18.4	98	57.883	ENSLACG00000017433	si:dkey-98f17.5	97	57.883	Latimeria_chalumnae
ENSACIG00000006696	si:ch211-11k18.4	99	57.301	ENSLOCG00000003824	si:dkey-98f17.5	99	57.301	Lepisosteus_oculatus
ENSACIG00000006696	si:ch211-11k18.4	99	58.758	ENSMAMG00000014528	si:dkey-98f17.5	100	58.758	Mastacembelus_armatus
ENSACIG00000006696	si:ch211-11k18.4	96	87.298	ENSMAMG00000002536	si:ch211-11k18.4	97	87.294	Mastacembelus_armatus
ENSACIG00000006696	si:ch211-11k18.4	100	91.574	ENSMZEG00005008941	si:ch211-11k18.4	99	91.574	Maylandia_zebra
ENSACIG00000006696	si:ch211-11k18.4	99	58.980	ENSMZEG00005016572	si:dkey-98f17.5	100	58.980	Maylandia_zebra
ENSACIG00000006696	si:ch211-11k18.4	100	80.044	ENSMMOG00000012485	si:ch211-11k18.4	99	80.044	Mola_mola
ENSACIG00000006696	si:ch211-11k18.4	98	61.609	ENSMALG00000012761	si:dkey-98f17.5	100	61.609	Monopterus_albus
ENSACIG00000006696	si:ch211-11k18.4	99	85.556	ENSMALG00000019735	si:ch211-11k18.4	99	85.556	Monopterus_albus
ENSACIG00000006696	si:ch211-11k18.4	96	90.993	ENSNBRG00000002220	si:ch211-11k18.4	97	91.059	Neolamprologus_brichardi
ENSACIG00000006696	si:ch211-11k18.4	99	59.020	ENSNBRG00000006068	si:dkey-98f17.5	100	59.020	Neolamprologus_brichardi
ENSACIG00000006696	si:ch211-11k18.4	99	59.202	ENSONIG00000013568	si:dkey-98f17.5	100	59.202	Oreochromis_niloticus
ENSACIG00000006696	si:ch211-11k18.4	100	90.022	ENSONIG00000019412	si:ch211-11k18.4	99	90.022	Oreochromis_niloticus
ENSACIG00000006696	si:ch211-11k18.4	91	60.197	ENSORLG00000007958	si:dkey-98f17.5	94	60.197	Oryzias_latipes
ENSACIG00000006696	si:ch211-11k18.4	99	85.333	ENSORLG00000012015	si:ch211-11k18.4	99	85.333	Oryzias_latipes
ENSACIG00000006696	si:ch211-11k18.4	99	58.093	ENSORLG00020013350	si:dkey-98f17.5	100	58.093	Oryzias_latipes_hni
ENSACIG00000006696	si:ch211-11k18.4	99	85.111	ENSORLG00020012386	si:ch211-11k18.4	99	85.111	Oryzias_latipes_hni
ENSACIG00000006696	si:ch211-11k18.4	99	58.093	ENSORLG00015002000	si:dkey-98f17.5	100	58.093	Oryzias_latipes_hsok
ENSACIG00000006696	si:ch211-11k18.4	99	85.556	ENSORLG00015022862	si:ch211-11k18.4	99	85.556	Oryzias_latipes_hsok
ENSACIG00000006696	si:ch211-11k18.4	99	85.778	ENSOMEG00000018686	si:ch211-11k18.4	99	85.778	Oryzias_melastigma
ENSACIG00000006696	si:ch211-11k18.4	99	58.093	ENSOMEG00000003154	si:dkey-98f17.5	100	58.093	Oryzias_melastigma
ENSACIG00000006696	si:ch211-11k18.4	99	76.222	ENSPKIG00000018807	si:ch211-11k18.4	99	77.778	Paramormyrops_kingsleyae
ENSACIG00000006696	si:ch211-11k18.4	99	74.889	ENSPKIG00000023918	-	98	74.889	Paramormyrops_kingsleyae
ENSACIG00000006696	si:ch211-11k18.4	99	59.382	ENSPKIG00000024621	si:dkey-98f17.5	100	59.382	Paramormyrops_kingsleyae
ENSACIG00000006696	si:ch211-11k18.4	99	58.628	ENSPMGG00000019065	si:dkey-98f17.5	100	58.628	Periophthalmus_magnuspinnatus
ENSACIG00000006696	si:ch211-11k18.4	99	84.889	ENSPMGG00000016507	si:ch211-11k18.4	99	84.889	Periophthalmus_magnuspinnatus
ENSACIG00000006696	si:ch211-11k18.4	99	86.222	ENSPFOG00000007976	si:ch211-11k18.4	99	86.222	Poecilia_formosa
ENSACIG00000006696	si:ch211-11k18.4	99	57.709	ENSPFOG00000015142	si:dkey-98f17.5	100	57.709	Poecilia_formosa
ENSACIG00000006696	si:ch211-11k18.4	99	58.537	ENSPLAG00000003709	si:dkey-98f17.5	100	58.537	Poecilia_latipinna
ENSACIG00000006696	si:ch211-11k18.4	99	86.222	ENSPLAG00000019794	si:ch211-11k18.4	99	86.222	Poecilia_latipinna
ENSACIG00000006696	si:ch211-11k18.4	99	58.093	ENSPMEG00000018709	si:dkey-98f17.5	94	58.093	Poecilia_mexicana
ENSACIG00000006696	si:ch211-11k18.4	99	86.000	ENSPMEG00000024198	si:ch211-11k18.4	99	86.000	Poecilia_mexicana
ENSACIG00000006696	si:ch211-11k18.4	98	59.497	ENSPREG00000000708	si:dkey-98f17.5	100	59.497	Poecilia_reticulata
ENSACIG00000006696	si:ch211-11k18.4	89	84.367	ENSPREG00000015319	si:ch211-11k18.4	92	84.367	Poecilia_reticulata
ENSACIG00000006696	si:ch211-11k18.4	100	91.796	ENSPNYG00000017099	si:ch211-11k18.4	99	91.796	Pundamilia_nyererei
ENSACIG00000006696	si:ch211-11k18.4	99	58.980	ENSPNYG00000017266	si:dkey-98f17.5	100	58.980	Pundamilia_nyererei
ENSACIG00000006696	si:ch211-11k18.4	99	58.407	ENSPNAG00000021352	si:dkey-98f17.5	100	58.407	Pygocentrus_nattereri
ENSACIG00000006696	si:ch211-11k18.4	99	80.444	ENSPNAG00000022138	si:ch211-11k18.4	99	80.444	Pygocentrus_nattereri
ENSACIG00000006696	si:ch211-11k18.4	99	56.637	ENSSFOG00015017965	si:dkey-98f17.5	100	56.637	Scleropages_formosus
ENSACIG00000006696	si:ch211-11k18.4	100	76.275	ENSSFOG00015000985	si:ch211-11k18.4	95	76.275	Scleropages_formosus
ENSACIG00000006696	si:ch211-11k18.4	99	87.333	ENSSMAG00000009651	si:ch211-11k18.4	99	87.333	Scophthalmus_maximus
ENSACIG00000006696	si:ch211-11k18.4	99	58.537	ENSSMAG00000011905	si:dkey-98f17.5	100	58.537	Scophthalmus_maximus
ENSACIG00000006696	si:ch211-11k18.4	99	87.556	ENSSDUG00000016411	si:ch211-11k18.4	99	87.556	Seriola_dumerili
ENSACIG00000006696	si:ch211-11k18.4	99	57.848	ENSSDUG00000013457	si:dkey-98f17.5	99	57.848	Seriola_dumerili
ENSACIG00000006696	si:ch211-11k18.4	99	87.333	ENSSLDG00000019145	si:ch211-11k18.4	99	87.333	Seriola_lalandi_dorsalis
ENSACIG00000006696	si:ch211-11k18.4	99	57.623	ENSSLDG00000025395	si:dkey-98f17.5	99	57.623	Seriola_lalandi_dorsalis
ENSACIG00000006696	si:ch211-11k18.4	88	64.899	ENSSPUG00000010096	-	100	64.899	Sphenodon_punctatus
ENSACIG00000006696	si:ch211-11k18.4	99	87.333	ENSSPAG00000010697	si:ch211-11k18.4	99	87.333	Stegastes_partitus
ENSACIG00000006696	si:ch211-11k18.4	99	58.315	ENSSPAG00000018800	si:dkey-98f17.5	100	58.315	Stegastes_partitus
ENSACIG00000006696	si:ch211-11k18.4	99	84.444	ENSTRUG00000020291	si:ch211-11k18.4	99	84.444	Takifugu_rubripes
ENSACIG00000006696	si:ch211-11k18.4	99	57.206	ENSTRUG00000021287	si:dkey-98f17.5	100	57.206	Takifugu_rubripes
ENSACIG00000006696	si:ch211-11k18.4	99	65.342	ENSXETG00000031783	-	99	65.342	Xenopus_tropicalis
ENSACIG00000006696	si:ch211-11k18.4	99	81.250	ENSXCOG00000018094	si:ch211-11k18.4	99	80.357	Xiphophorus_couchianus
ENSACIG00000006696	si:ch211-11k18.4	99	58.575	ENSXCOG00000017002	si:dkey-98f17.5	100	58.575	Xiphophorus_couchianus
ENSACIG00000006696	si:ch211-11k18.4	99	86.222	ENSXMAG00000021235	si:ch211-11k18.4	99	86.222	Xiphophorus_maculatus
ENSACIG00000006696	si:ch211-11k18.4	99	58.315	ENSXMAG00000007688	si:dkey-98f17.5	95	58.315	Xiphophorus_maculatus