EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000006790 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
12176 bases
Position
chrCCOE01001374.1:355367-367542
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000008697RNase_Zc3h12aPF11977.82.4e-6211
ENSACIP00000008711RNase_Zc3h12aPF11977.81.7e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000008971-480-ENSACIP00000008711159 (aa)--
ENSACIT00000008957-1824-ENSACIP00000008697607 (aa)--
Gene Model
Click here to download ENSACIG00000006790's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006790's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000006790-9043.226ENSACIG00000017750zc3h12a5256.748
ENSACIG00000006790-9045.098ENSACIG00000005689-7356.087
ENSACIG00000006790-9043.421ENSACIG00000004135si:dkey-206d17.128054.585
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000006790-9447.742ENSG00000163874ZC3H12A8656.967Homo_sapiens
ENSACIG00000006790-9048.951ENSAPOG00000001632-5860.884Acanthochromis_polyacanthus
ENSACIG00000006790-9874.833ENSAPOG00000005848-9975.833Acanthochromis_polyacanthus
ENSACIG00000006790-9239.216ENSAPOG00000024328zc3h12a5254.154Acanthochromis_polyacanthus
ENSACIG00000006790-9449.032ENSAMEG00000000991ZC3H12A5259.807Ailuropoda_melanoleuca
ENSACIG00000006790-9044.516ENSAOCG00000001288-8856.667Amphiprion_ocellaris
ENSACIG00000006790-9144.937ENSAOCG00000003866-8555.556Amphiprion_ocellaris
ENSACIG00000006790-9875.500ENSAOCG00000009106-9976.667Amphiprion_ocellaris
ENSACIG00000006790-9243.836ENSAOCG00000014326-8753.982Amphiprion_ocellaris
ENSACIG00000006790-9875.500ENSAPEG00000004229-9976.667Amphiprion_percula
ENSACIG00000006790-9243.478ENSAPEG00000005727-9443.949Amphiprion_percula
ENSACIG00000006790-9045.161ENSAPEG00000022263-8857.083Amphiprion_percula
ENSACIG00000006790-9243.836ENSAPEG00000021795si:dkey-206d17.128753.982Amphiprion_percula
ENSACIG00000006790-9483.333ENSATEG00000013053-8785.000Anabas_testudineus
ENSACIG00000006790-9044.516ENSATEG00000002260-8556.017Anabas_testudineus
ENSACIG00000006790-9245.455ENSATEG00000009946zc3h12a6749.083Anabas_testudineus
ENSACIG00000006790-9442.945ENSATEG00000006140si:dkey-206d17.129342.945Anabas_testudineus
ENSACIG00000006790-9241.397ENSACAG00000017285ZC3H12A9341.431Anolis_carolinensis
ENSACIG00000006790-9448.052ENSANAG00000009908ZC3H12A8755.691Aotus_nancymaae
ENSACIG00000006790-9243.226ENSACLG00000004488si:dkey-206d17.128939.032Astatotilapia_calliptera
ENSACIG00000006790-9886.622ENSACLG00000018534-9986.622Astatotilapia_calliptera
ENSACIG00000006790-9458.182ENSAMXG00000030754-9948.344Astyanax_mexicanus
ENSACIG00000006790-9440.645ENSAMXG00000029641si:dkey-206d17.128052.869Astyanax_mexicanus
ENSACIG00000006790-9440.244ENSAMXG00000001736zc3h12a6051.459Astyanax_mexicanus
ENSACIG00000006790-9247.020ENSBTAG00000011316ZC3H12A5358.710Bos_taurus
ENSACIG00000006790-9449.032ENSCJAG00000041792ZC3H12A9140.069Callithrix_jacchus
ENSACIG00000006790-9449.677ENSCAFG00000003304ZC3H12A9739.773Canis_familiaris
ENSACIG00000006790-9449.677ENSCAFG00020008620ZC3H12A9739.773Canis_lupus_dingo
ENSACIG00000006790-9247.020ENSCHIG00000021957ZC3H12A5358.387Capra_hircus
ENSACIG00000006790-9450.658ENSTSYG00000035959ZC3H12A5160.390Carlito_syrichta
ENSACIG00000006790-9448.366ENSCAPG00000015365ZC3H12A9940.577Cavia_aperea
ENSACIG00000006790-9447.712ENSCPOG00000011081ZC3H12A9940.238Cavia_porcellus
ENSACIG00000006790-9448.701ENSCCAG00000023848ZC3H12A5260.129Cebus_capucinus
ENSACIG00000006790-9249.342ENSCATG00000037700ZC3H12A8556.557Cercocebus_atys
ENSACIG00000006790-9449.032ENSCLAG00000008722ZC3H12A5260.000Chinchilla_lanigera
ENSACIG00000006790-9249.673ENSCSAG00000001106ZC3H12A5259.936Chlorocebus_sabaeus
ENSACIG00000006790-9249.342ENSCANG00000042287ZC3H12A8556.557Colobus_angolensis_palliatus
ENSACIG00000006790-9449.673ENSCGRG00001015497Zc3h12a5159.416Cricetulus_griseus_chok1gshd
ENSACIG00000006790-9449.673ENSCGRG00000013149Zc3h12a5159.416Cricetulus_griseus_crigri
ENSACIG00000006790-9337.825ENSCSEG00000019043zc3h12a9537.920Cynoglossus_semilaevis
ENSACIG00000006790-9344.910ENSCSEG00000010073-9045.783Cynoglossus_semilaevis
ENSACIG00000006790-9043.791ENSCSEG00000010348si:dkey-206d17.126249.132Cynoglossus_semilaevis
ENSACIG00000006790-9243.506ENSCVAG00000017420zc3h12a5154.969Cyprinodon_variegatus
ENSACIG00000006790-9442.208ENSCVAG00000001516si:dkey-206d17.125055.375Cyprinodon_variegatus
ENSACIG00000006790-9280.822ENSCVAG00000001077-9180.408Cyprinodon_variegatus
ENSACIG00000006790-9049.664ENSCVAG00000016808-8759.735Cyprinodon_variegatus
ENSACIG00000006790-9442.073ENSDARG00000101034si:dkey-206d17.125055.793Danio_rerio
ENSACIG00000006790-9443.046ENSDARG00000005271zc3h12a8061.000Danio_rerio
ENSACIG00000006790-9446.753ENSDNOG00000035006ZC3H12A5159.223Dasypus_novemcinctus
ENSACIG00000006790-9448.387ENSDORG00000012666Zc3h12a9340.986Dipodomys_ordii
ENSACIG00000006790-6040.000ENSETEG00000018311ZC3H12A6346.753Echinops_telfairi
ENSACIG00000006790-9249.020ENSEASG00005012220ZC3H12A5656.970Equus_asinus_asinus
ENSACIG00000006790-9249.020ENSECAG00000009562ZC3H12A5356.970Equus_caballus
ENSACIG00000006790-8739.399ENSEEUG00000005907ZC3H12A9940.614Erinaceus_europaeus
ENSACIG00000006790-8466.187ENSELUG00000018728-8955.705Esox_lucius
ENSACIG00000006790-9448.387ENSFCAG00000008757ZC3H12A5656.548Felis_catus
ENSACIG00000006790-9242.105ENSFHEG00000001019zc3h12a5453.433Fundulus_heteroclitus
ENSACIG00000006790-9743.017ENSFHEG00000021225-9342.614Fundulus_heteroclitus
ENSACIG00000006790-8383.333ENSFHEG00000011425-9965.404Fundulus_heteroclitus
ENSACIG00000006790-9242.208ENSFHEG00000001174si:dkey-206d17.129239.523Fundulus_heteroclitus
ENSACIG00000006790-9246.575ENSGMOG00000014437-9963.344Gadus_morhua
ENSACIG00000006790-9338.542ENSGMOG00000007388-9938.540Gadus_morhua
ENSACIG00000006790-9039.161ENSGMOG00000017603si:dkey-206d17.126053.512Gadus_morhua
ENSACIG00000006790-9283.108ENSGAFG00000009523-9966.031Gambusia_affinis
ENSACIG00000006790-9243.624ENSGAFG00000019001si:dkey-206d17.125455.290Gambusia_affinis
ENSACIG00000006790-9340.684ENSGACG00000002341si:dkey-206d17.125655.949Gasterosteus_aculeatus
ENSACIG00000006790-9542.038ENSGACG00000013859zc3h12a5058.703Gasterosteus_aculeatus
ENSACIG00000006790-9274.658ENSGACG00000006636-9984.713Gasterosteus_aculeatus
ENSACIG00000006790-9447.742ENSGGOG00000009268ZC3H12A9438.571Gorilla_gorilla
ENSACIG00000006790-9243.226ENSHBUG00000017076si:dkey-206d17.128939.866Haplochromis_burtoni
ENSACIG00000006790-9886.455ENSHBUG00000021584-9791.667Haplochromis_burtoni
ENSACIG00000006790-9967.516ENSHCOG00000007306-9367.516Hippocampus_comes
ENSACIG00000006790-8748.201ENSHCOG00000008878-5745.752Hippocampus_comes
ENSACIG00000006790-9041.447ENSHCOG00000004255si:dkey-206d17.129248.511Hippocampus_comes
ENSACIG00000006790-9661.438ENSIPUG00000011663-9951.404Ictalurus_punctatus
ENSACIG00000006790-9442.857ENSIPUG00000005852si:dkey-206d17.125253.623Ictalurus_punctatus
ENSACIG00000006790-9449.359ENSSTOG00000026842ZC3H12A5259.936Ictidomys_tridecemlineatus
ENSACIG00000006790-9449.677ENSJJAG00000004252Zc3h12a9239.967Jaculus_jaculus
ENSACIG00000006790-9243.919ENSKMAG00000002156ZC3H12A8453.571Kryptolebias_marmoratus
ENSACIG00000006790-9475.839ENSKMAG00000014401-9865.714Kryptolebias_marmoratus
ENSACIG00000006790-9242.767ENSKMAG00000013650zc3h12a5552.101Kryptolebias_marmoratus
ENSACIG00000006790-9044.720ENSKMAG00000013285-8958.577Kryptolebias_marmoratus
ENSACIG00000006790-9369.204ENSLBEG00000012121-9968.166Labrus_bergylta
ENSACIG00000006790-9046.203ENSLBEG00000012554-8546.154Labrus_bergylta
ENSACIG00000006790-8836.486ENSLBEG00000017593si:dkey-206d17.125052.218Labrus_bergylta
ENSACIG00000006790-9246.452ENSLOCG00000003232si:dkey-206d17.125060.577Lepisosteus_oculatus
ENSACIG00000006790-9461.333ENSLOCG00000017000-9950.258Lepisosteus_oculatus
ENSACIG00000006790-9448.125ENSLAFG00000018720ZC3H12A9439.832Loxodonta_africana
ENSACIG00000006790-9249.342ENSMFAG00000032647ZC3H12A8556.557Macaca_fascicularis
ENSACIG00000006790-9249.342ENSMMUG00000010323ZC3H12A5259.807Macaca_mulatta
ENSACIG00000006790-9249.342ENSMNEG00000040453ZC3H12A8556.557Macaca_nemestrina
ENSACIG00000006790-9249.342ENSMLEG00000034570ZC3H12A8556.557Mandrillus_leucophaeus
ENSACIG00000006790-9145.912ENSMAMG00000021794-9445.570Mastacembelus_armatus
ENSACIG00000006790-9282.192ENSMAMG00000004463-9184.711Mastacembelus_armatus
ENSACIG00000006790-9448.750ENSMZEG00005019137-9448.750Maylandia_zebra
ENSACIG00000006790-9442.138ENSMZEG00005023410ZC3H12A7854.113Maylandia_zebra
ENSACIG00000006790-9243.226ENSMZEG00005026287si:dkey-206d17.128939.032Maylandia_zebra
ENSACIG00000006790-9886.789ENSMZEG00005015555-9986.789Maylandia_zebra
ENSACIG00000006790-9247.333ENSMGAG00000003371ZC3H12A5459.748Meleagris_gallopavo
ENSACIG00000006790-9449.020ENSMAUG00000012893Zc3h12a5258.766Mesocricetus_auratus
ENSACIG00000006790-9448.387ENSMICG00000004790ZC3H12A9439.374Microcebus_murinus
ENSACIG00000006790-9449.686ENSMOCG00000001899Zc3h12a5258.917Microtus_ochrogaster
ENSACIG00000006790-9041.290ENSMMOG00000013604si:dkey-206d17.125257.338Mola_mola
ENSACIG00000006790-9277.551ENSMMOG00000014855-9179.832Mola_mola
ENSACIG00000006790-9241.176ENSMMOG00000000727zc3h12a9936.223Mola_mola
ENSACIG00000006790-9245.122ENSMMOG00000005728-8645.806Mola_mola
ENSACIG00000006790-9281.507ENSMALG00000018908-9967.474Monopterus_albus
ENSACIG00000006790-9450.641MGP_CAROLIEiJ_G0026462Zc3h12a9240.198Mus_caroli
ENSACIG00000006790-9451.282ENSMUSG00000042677Zc3h12a9240.527Mus_musculus
ENSACIG00000006790-9450.323MGP_PahariEiJ_G0028793Zc3h12a9241.554Mus_pahari
ENSACIG00000006790-9450.641MGP_SPRETEiJ_G0027441Zc3h12a8459.322Mus_spretus
ENSACIG00000006790-9447.403ENSMPUG00000014758ZC3H12A5458.710Mustela_putorius_furo
ENSACIG00000006790-9447.742ENSMLUG00000027279ZC3H12A5656.456Myotis_lucifugus
ENSACIG00000006790-9449.677ENSNGAG00000018725Zc3h12a9739.703Nannospalax_galili
ENSACIG00000006790-9449.045ENSNBRG00000012175-9449.045Neolamprologus_brichardi
ENSACIG00000006790-9243.226ENSNBRG00000014376si:dkey-206d17.129740.266Neolamprologus_brichardi
ENSACIG00000006790-9785.859ENSNBRG00000010961-10089.015Neolamprologus_brichardi
ENSACIG00000006790-5543.333ENSMEUG00000003389ZC3H12A5144.326Notamacropus_eugenii
ENSACIG00000006790-9448.387ENSODEG00000005643ZC3H12A5159.935Octodon_degus
ENSACIG00000006790-9241.401ENSONIG00000016235zc3h12a5458.117Oreochromis_niloticus
ENSACIG00000006790-9243.871ENSONIG00000013685si:dkey-206d17.129840.472Oreochromis_niloticus
ENSACIG00000006790-9449.673ENSOANG00000002060ZC3H12A5954.133Ornithorhynchus_anatinus
ENSACIG00000006790-9448.701ENSOCUG00000010856ZC3H12A7860.526Oryctolagus_cuniculus
ENSACIG00000006790-9278.082ENSORLG00000015280-9962.912Oryzias_latipes
ENSACIG00000006790-9343.038ENSORLG00000009473ZC3H12A8454.825Oryzias_latipes
ENSACIG00000006790-9278.767ENSORLG00020008580-8962.437Oryzias_latipes_hni
ENSACIG00000006790-9044.000ENSORLG00020016107-7047.631Oryzias_latipes_hni
ENSACIG00000006790-9043.333ENSORLG00015007634ZC3H12A7047.880Oryzias_latipes_hsok
ENSACIG00000006790-9278.767ENSORLG00015003680-8962.267Oryzias_latipes_hsok
ENSACIG00000006790-9443.590ENSOMEG00000000483zc3h12a5254.790Oryzias_melastigma
ENSACIG00000006790-9280.137ENSOMEG00000011669-9963.103Oryzias_melastigma
ENSACIG00000006790-8845.578ENSOMEG00000005602si:dkey-206d17.127047.525Oryzias_melastigma
ENSACIG00000006790-9447.742ENSOGAG00000030940ZC3H12A9440.134Otolemur_garnettii
ENSACIG00000006790-9247.020ENSOARG00000019760ZC3H12A7258.065Ovis_aries
ENSACIG00000006790-9446.753ENSPPAG00000041054ZC3H12A8656.379Pan_paniscus
ENSACIG00000006790-9448.387ENSPPRG00000014359ZC3H12A7148.700Panthera_pardus
ENSACIG00000006790-9448.387ENSPTIG00000012943ZC3H12A8756.098Panthera_tigris_altaica
ENSACIG00000006790-9446.753ENSPTRG00000000544ZC3H12A8656.379Pan_troglodytes
ENSACIG00000006790-9249.342ENSPANG00000011821ZC3H12A8556.557Papio_anubis
ENSACIG00000006790-9465.132ENSPKIG00000019720-7671.983Paramormyrops_kingsleyae
ENSACIG00000006790-9248.701ENSPSIG00000009198ZC3H12A5461.342Pelodiscus_sinensis
ENSACIG00000006790-8742.763ENSPMGG00000009790-5359.170Periophthalmus_magnuspinnatus
ENSACIG00000006790-9041.333ENSPMGG00000004114zc3h12a5655.000Periophthalmus_magnuspinnatus
ENSACIG00000006790-9450.968ENSPEMG00000024080Zc3h12a7049.528Peromyscus_maniculatus_bairdii
ENSACIG00000006790-6935.240ENSPFOG00000002933si:dkey-206d17.129934.562Poecilia_formosa
ENSACIG00000006790-9282.877ENSPFOG00000004135-9968.959Poecilia_formosa
ENSACIG00000006790-9242.105ENSPFOG00000013935zc3h12a5554.179Poecilia_formosa
ENSACIG00000006790-9242.105ENSPLAG00000020965zc3h12a5554.179Poecilia_latipinna
ENSACIG00000006790-9282.877ENSPLAG00000001211-9968.254Poecilia_latipinna
ENSACIG00000006790-9242.675ENSPMEG00000013674zc3h12a5156.061Poecilia_mexicana
ENSACIG00000006790-9243.590ENSPMEG00000011188si:dkey-206d17.129438.291Poecilia_mexicana
ENSACIG00000006790-9482.000ENSPMEG00000009279-9683.333Poecilia_mexicana
ENSACIG00000006790-9282.192ENSPREG00000020369-9567.075Poecilia_reticulata
ENSACIG00000006790-9244.295ENSPREG00000005453zc3h12a5355.589Poecilia_reticulata
ENSACIG00000006790-9049.664ENSPREG00000001607-7658.798Poecilia_reticulata
ENSACIG00000006790-9448.387ENSPPYG00000001534ZC3H12A5259.486Pongo_abelii
ENSACIG00000006790-9449.032ENSPCOG00000015837ZC3H12A9439.339Propithecus_coquereli
ENSACIG00000006790-9886.622ENSPNYG00000010663-9986.622Pundamilia_nyererei
ENSACIG00000006790-9243.226ENSPNYG00000003297si:dkey-206d17.128939.601Pundamilia_nyererei
ENSACIG00000006790-9458.642ENSPNAG00000012124-9850.000Pygocentrus_nattereri
ENSACIG00000006790-9449.677ENSRNOG00000009131Zc3h12a5061.616Rattus_norvegicus
ENSACIG00000006790-9249.342ENSRBIG00000042237ZC3H12A9439.280Rhinopithecus_bieti
ENSACIG00000006790-9249.342ENSRROG00000037444ZC3H12A8556.557Rhinopithecus_roxellana
ENSACIG00000006790-9449.351ENSSBOG00000028357ZC3H12A5260.129Saimiri_boliviensis_boliviensis
ENSACIG00000006790-5856.122ENSSFOG00015005925zc3h12a5764.535Scleropages_formosus
ENSACIG00000006790-9282.877ENSSMAG00000017632-9872.049Scophthalmus_maximus
ENSACIG00000006790-9240.397ENSSMAG00000001367si:dkey-206d17.128838.308Scophthalmus_maximus
ENSACIG00000006790-9243.137ENSSDUG00000009879zc3h12a5256.135Seriola_dumerili
ENSACIG00000006790-9086.713ENSSDUG00000010581-9682.869Seriola_dumerili
ENSACIG00000006790-9147.682ENSSDUG00000013237-9647.682Seriola_dumerili
ENSACIG00000006790-9243.137ENSSLDG00000003826zc3h12a5256.442Seriola_lalandi_dorsalis
ENSACIG00000006790-8843.624ENSSLDG00000009317si:dkey-206d17.128554.310Seriola_lalandi_dorsalis
ENSACIG00000006790-9282.192ENSSLDG00000022022-9872.533Seriola_lalandi_dorsalis
ENSACIG00000006790-9282.877ENSSPAG00000022537-9875.793Stegastes_partitus
ENSACIG00000006790-9043.421ENSSPAG00000020938si:dkey-206d17.129139.724Stegastes_partitus
ENSACIG00000006790-9243.624ENSSPAG00000012466zc3h12a5157.643Stegastes_partitus
ENSACIG00000006790-9250.000ENSSSCG00000037815ZC3H12A5359.740Sus_scrofa
ENSACIG00000006790-7941.980ENSTGUG00000001563ZC3H12A9741.980Taeniopygia_guttata
ENSACIG00000006790-9243.590ENSTRUG00000010565si:dkey-206d17.125156.478Takifugu_rubripes
ENSACIG00000006790-9245.963ENSTNIG00000014519-9554.086Tetraodon_nigroviridis
ENSACIG00000006790-9442.282ENSTNIG00000001274si:dkey-206d17.125556.897Tetraodon_nigroviridis
ENSACIG00000006790-9249.342ENSTTRG00000008591ZC3H12A9539.769Tursiops_truncatus
ENSACIG00000006790-9449.032ENSUAMG00000014105ZC3H12A5259.807Ursus_americanus
ENSACIG00000006790-9449.032ENSUMAG00000001122ZC3H12A5359.486Ursus_maritimus
ENSACIG00000006790-9449.677ENSVVUG00000023171ZC3H12A9739.610Vulpes_vulpes
ENSACIG00000006790-9447.742ENSXETG00000011465zc3h12a5262.759Xenopus_tropicalis
ENSACIG00000006790-9680.000ENSXCOG00000001538-9185.714Xiphophorus_couchianus
ENSACIG00000006790-8946.207ENSXCOG00000008984zc3h12a8745.775Xiphophorus_couchianus
ENSACIG00000006790-9048.993ENSXMAG00000014715-8360.619Xiphophorus_maculatus
ENSACIG00000006790-9680.000ENSXMAG00000005023-9185.714Xiphophorus_maculatus
ENSACIG00000006790-9242.105ENSXMAG00000014646zc3h12a5354.491Xiphophorus_maculatus
ENSACIG00000006790-9242.949ENSXMAG00000025043si:dkey-206d17.125354.333Xiphophorus_maculatus

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