EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 13230 bases
Position: chrCCOE01000440.1:3324206-3337435
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008951	dsrm	PF00035.26	8e-14	1	2
ENSACIP00000008951	dsrm	PF00035.26	8e-14	2	2
ENSACIP00000008926	dsrm	PF00035.26	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009222	-	1290	-	ENSACIP00000008951	429 (aa)	-	-
ENSACIT00000009195	-	1233	-	ENSACIP00000008926	410 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006955	-	94	60.870	ENSACIG00000007027	eif2ak2	69	60.535
ENSACIG00000006955	-	95	66.667	ENSACIG00000006777	eif2ak2	96	45.283
ENSACIG00000006955	-	86	50.608	ENSACIG00000006710	-	96	50.608
ENSACIG00000006955	-	96	63.636	ENSACIG00000006536	eif2ak2	99	47.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006955	-	98	63.087	ENSAPOG00000010706	eif2ak2	64	63.087	Acanthochromis_polyacanthus
ENSACIG00000006955	-	96	66.552	ENSAPOG00000010662	eif2ak2	70	66.552	Acanthochromis_polyacanthus
ENSACIG00000006955	-	95	59.386	ENSAPOG00000010636	-	65	60.751	Acanthochromis_polyacanthus
ENSACIG00000006955	-	96	67.931	ENSAOCG00000003397	eif2ak2	70	67.931	Amphiprion_ocellaris
ENSACIG00000006955	-	95	58.108	ENSAOCG00000003414	-	65	60.135	Amphiprion_ocellaris
ENSACIG00000006955	-	95	49.901	ENSAPEG00000023675	eif2ak2	78	50.391	Amphiprion_percula
ENSACIG00000006955	-	96	67.586	ENSAPEG00000023879	eif2ak2	70	67.586	Amphiprion_percula
ENSACIG00000006955	-	95	58.076	ENSATEG00000015063	eif2ak2	96	51.905	Anabas_testudineus
ENSACIG00000006955	-	94	53.398	ENSATEG00000015535	eif2ak2	69	56.329	Anabas_testudineus
ENSACIG00000006955	-	98	58.333	ENSATEG00000015425	eif2ak2	88	48.276	Anabas_testudineus
ENSACIG00000006955	-	87	77.517	ENSACLG00000023843	-	84	77.517	Astatotilapia_calliptera
ENSACIG00000006955	-	93	40.909	ENSAMXG00000003716	eif2ak2	90	41.558	Astyanax_mexicanus
ENSACIG00000006955	-	89	55.844	ENSCSEG00000012820	-	97	40.811	Cynoglossus_semilaevis
ENSACIG00000006955	-	96	48.926	ENSCSEG00000012878	eif2ak2	72	49.165	Cynoglossus_semilaevis
ENSACIG00000006955	-	97	43.665	ENSCVAG00000003185	-	95	43.213	Cyprinodon_variegatus
ENSACIG00000006955	-	94	48.373	ENSCVAG00000014725	eif2ak2	95	47.222	Cyprinodon_variegatus
ENSACIG00000006955	-	94	47.183	ENSDARG00000068729	eif2ak2	63	48.239	Danio_rerio
ENSACIG00000006955	-	68	46.465	ENSDARG00000052396	pkz	62	46.465	Danio_rerio
ENSACIG00000006955	-	76	36.412	ENSELUG00000018078	-	69	36.412	Esox_lucius
ENSACIG00000006955	-	95	53.950	ENSELUG00000018164	eif2ak2	75	58.392	Esox_lucius
ENSACIG00000006955	-	95	55.556	ENSGMOG00000018784	eif2ak2	86	44.715	Gadus_morhua
ENSACIG00000006955	-	80	41.734	ENSGMOG00000018813	eif2ak2	81	45.426	Gadus_morhua
ENSACIG00000006955	-	94	46.014	ENSGAFG00000005231	-	77	50.133	Gambusia_affinis
ENSACIG00000006955	-	99	75.920	ENSHBUG00000022151	-	72	75.920	Haplochromis_burtoni
ENSACIG00000006955	-	82	46.429	ENSHBUG00000022216	-	68	45.431	Haplochromis_burtoni
ENSACIG00000006955	-	95	40.695	ENSHCOG00000010443	-	77	40.900	Hippocampus_comes
ENSACIG00000006955	-	95	42.568	ENSIPUG00000019933	eif2ak2	64	49.648	Ictalurus_punctatus
ENSACIG00000006955	-	95	51.972	ENSMAMG00000017311	eif2ak2	89	51.972	Mastacembelus_armatus
ENSACIG00000006955	-	93	54.082	ENSMAMG00000017342	eif2ak2	97	47.964	Mastacembelus_armatus
ENSACIG00000006955	-	96	53.584	ENSMZEG00005009825	eif2ak2	67	53.584	Maylandia_zebra
ENSACIG00000006955	-	99	67.391	ENSMZEG00005009773	eif2ak2	99	65.258	Maylandia_zebra
ENSACIG00000006955	-	94	52.147	ENSMMOG00000000711	-	77	52.147	Mola_mola
ENSACIG00000006955	-	71	76.667	ENSMALG00000005115	eif2ak2	54	76.667	Monopterus_albus
ENSACIG00000006955	-	95	75.758	ENSMALG00000005083	eif2ak2	77	52.083	Monopterus_albus
ENSACIG00000006955	-	94	59.532	ENSNBRG00000012219	-	67	59.532	Neolamprologus_brichardi
ENSACIG00000006955	-	94	47.534	ENSNBRG00000019433	-	88	50.000	Neolamprologus_brichardi
ENSACIG00000006955	-	98	53.443	ENSNBRG00000011967	eif2ak2	99	44.028	Neolamprologus_brichardi
ENSACIG00000006955	-	85	56.627	ENSONIG00000010933	-	73	56.627	Oreochromis_niloticus
ENSACIG00000006955	-	96	51.557	ENSORLG00000012432	eif2ak2	97	42.584	Oryzias_latipes
ENSACIG00000006955	-	81	62.121	ENSORLG00000018980	-	69	55.017	Oryzias_latipes
ENSACIG00000006955	-	96	50.129	ENSORLG00020014073	eif2ak2	73	50.129	Oryzias_latipes_hni
ENSACIG00000006955	-	81	60.606	ENSORLG00020014108	-	65	54.110	Oryzias_latipes_hni
ENSACIG00000006955	-	83	62.121	ENSORLG00015023149	eif2ak2	69	55.137	Oryzias_latipes_hsok
ENSACIG00000006955	-	96	43.711	ENSORLG00015023155	eif2ak2	96	43.103	Oryzias_latipes_hsok
ENSACIG00000006955	-	96	75.000	ENSOMEG00000019925	-	89	45.205	Oryzias_melastigma
ENSACIG00000006955	-	93	52.249	ENSOMEG00000019857	eif2ak2	96	43.914	Oryzias_melastigma
ENSACIG00000006955	-	71	35.263	ENSPKIG00000024012	pkz	66	35.263	Paramormyrops_kingsleyae
ENSACIG00000006955	-	96	41.429	ENSPKIG00000024036	eif2ak2	72	44.118	Paramormyrops_kingsleyae
ENSACIG00000006955	-	95	50.630	ENSPMGG00000001652	eif2ak2	78	50.630	Periophthalmus_magnuspinnatus
ENSACIG00000006955	-	85	39.604	ENSPMGG00000001624	-	96	39.604	Periophthalmus_magnuspinnatus
ENSACIG00000006955	-	94	63.636	ENSPLAG00000023307	-	94	45.771	Poecilia_latipinna
ENSACIG00000006955	-	94	43.864	ENSPMEG00000013612	-	70	50.437	Poecilia_mexicana
ENSACIG00000006955	-	91	41.139	ENSPMEG00000013631	eif2ak2	63	52.015	Poecilia_mexicana
ENSACIG00000006955	-	95	43.284	ENSPREG00000007905	-	78	43.683	Poecilia_reticulata
ENSACIG00000006955	-	95	46.032	ENSPNYG00000014187	eif2ak2	89	46.032	Pundamilia_nyererei
ENSACIG00000006955	-	96	72.819	ENSPNYG00000014220	-	68	72.819	Pundamilia_nyererei
ENSACIG00000006955	-	96	45.249	ENSPNYG00000023883	-	89	46.438	Pundamilia_nyererei
ENSACIG00000006955	-	82	54.054	ENSPNAG00000000508	eif2ak2	54	49.470	Pygocentrus_nattereri
ENSACIG00000006955	-	90	33.038	ENSSFOG00015008967	-	79	37.097	Scleropages_formosus
ENSACIG00000006955	-	97	46.681	ENSSMAG00000010296	-	96	46.919	Scophthalmus_maximus
ENSACIG00000006955	-	95	70.648	ENSSDUG00000002922	eif2ak2	61	70.648	Seriola_dumerili
ENSACIG00000006955	-	94	61.301	ENSSDUG00000002837	eif2ak2	65	61.301	Seriola_dumerili
ENSACIG00000006955	-	96	49.310	ENSSLDG00000024893	-	78	49.310	Seriola_lalandi_dorsalis
ENSACIG00000006955	-	97	60.410	ENSSLDG00000024874	eif2ak2	65	60.751	Seriola_lalandi_dorsalis
ENSACIG00000006955	-	95	71.672	ENSSLDG00000024886	-	61	71.672	Seriola_lalandi_dorsalis
ENSACIG00000006955	-	98	66.225	ENSSPAG00000007629	-	70	68.874	Stegastes_partitus
ENSACIG00000006955	-	54	54.701	ENSSPAG00000007476	-	54	54.701	Stegastes_partitus
ENSACIG00000006955	-	92	70.588	ENSTRUG00000022205	-	97	38.393	Takifugu_rubripes
ENSACIG00000006955	-	94	35.854	ENSXETG00000009025	pkr2	68	37.598	Xenopus_tropicalis
ENSACIG00000006955	-	85	41.866	ENSXCOG00000006961	-	96	41.866	Xiphophorus_couchianus
ENSACIG00000006955	-	95	63.889	ENSXMAG00000006536	eif2ak2	89	42.482	Xiphophorus_maculatus
ENSACIG00000006955	-	77	53.498	ENSXMAG00000006521	eif2ak2	60	60.256	Xiphophorus_maculatus