EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006968 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3600 bases
Position: chrCCOE01001249.1:791495-795094
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008924	Sua5_yciO_yrdC	PF01300.18	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009193	-	2439	-	ENSACIP00000008924	813 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006968	si:ch211-153b23.3	83	44.910	ENSACIG00000006997	si:ch211-153b23.4	81	44.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006968	si:ch211-153b23.3	100	67.460	ENSAOCG00000010974	si:ch211-153b23.3	100	67.460	Amphiprion_ocellaris
ENSACIG00000006968	si:ch211-153b23.3	100	68.594	ENSAPEG00000014700	si:ch211-153b23.3	100	68.594	Amphiprion_percula
ENSACIG00000006968	si:ch211-153b23.3	100	92.121	ENSATEG00000004956	si:ch211-153b23.3	93	92.121	Anabas_testudineus
ENSACIG00000006968	si:ch211-153b23.3	55	45.833	ENSACLG00000005471	si:ch211-153b23.4	55	45.833	Astatotilapia_calliptera
ENSACIG00000006968	si:ch211-153b23.3	100	72.955	ENSACLG00000005894	si:ch211-153b23.3	100	73.182	Astatotilapia_calliptera
ENSACIG00000006968	si:ch211-153b23.3	100	64.619	ENSAMXG00000038564	si:ch211-153b23.3	99	64.619	Astyanax_mexicanus
ENSACIG00000006968	si:ch211-153b23.3	99	69.852	ENSCSEG00000014853	si:ch211-153b23.3	100	69.852	Cynoglossus_semilaevis
ENSACIG00000006968	si:ch211-153b23.3	100	89.697	ENSCVAG00000021124	si:ch211-153b23.3	93	89.697	Cyprinodon_variegatus
ENSACIG00000006968	si:ch211-153b23.3	97	43.452	ENSDARG00000077169	si:ch211-153b23.4	85	43.452	Danio_rerio
ENSACIG00000006968	si:ch211-153b23.3	100	86.310	ENSDARG00000104919	si:ch211-153b23.3	93	86.310	Danio_rerio
ENSACIG00000006968	si:ch211-153b23.3	93	67.138	ENSELUG00000004912	si:ch211-153b23.3	99	67.138	Esox_lucius
ENSACIG00000006968	si:ch211-153b23.3	53	43.976	ENSFALG00000011343	-	52	43.713	Ficedula_albicollis
ENSACIG00000006968	si:ch211-153b23.3	100	74.041	ENSFHEG00000010030	si:ch211-153b23.3	99	74.041	Fundulus_heteroclitus
ENSACIG00000006968	si:ch211-153b23.3	100	73.416	ENSGAFG00000007455	si:ch211-153b23.3	99	73.416	Gambusia_affinis
ENSACIG00000006968	si:ch211-153b23.3	83	45.238	ENSGACG00000018253	si:ch211-153b23.4	78	45.238	Gasterosteus_aculeatus
ENSACIG00000006968	si:ch211-153b23.3	100	73.182	ENSHBUG00000001760	si:ch211-153b23.3	100	73.409	Haplochromis_burtoni
ENSACIG00000006968	si:ch211-153b23.3	100	64.692	ENSIPUG00000015213	si:ch211-153b23.3	93	84.242	Ictalurus_punctatus
ENSACIG00000006968	si:ch211-153b23.3	100	42.857	ENSIPUG00000015205	si:ch211-153b23.4	91	42.857	Ictalurus_punctatus
ENSACIG00000006968	si:ch211-153b23.3	55	44.970	ENSKMAG00000006919	-	52	44.970	Kryptolebias_marmoratus
ENSACIG00000006968	si:ch211-153b23.3	99	73.636	ENSKMAG00000006792	si:ch211-153b23.3	99	73.636	Kryptolebias_marmoratus
ENSACIG00000006968	si:ch211-153b23.3	55	44.910	ENSLBEG00000026309	si:ch211-153b23.4	51	44.910	Labrus_bergylta
ENSACIG00000006968	si:ch211-153b23.3	100	75.517	ENSLBEG00000026324	si:ch211-153b23.3	99	75.517	Labrus_bergylta
ENSACIG00000006968	si:ch211-153b23.3	94	70.659	ENSLACG00000005800	-	92	70.659	Latimeria_chalumnae
ENSACIG00000006968	si:ch211-153b23.3	86	74.825	ENSLOCG00000015063	si:ch211-153b23.3	91	74.825	Lepisosteus_oculatus
ENSACIG00000006968	si:ch211-153b23.3	100	74.120	ENSMAMG00000009328	si:ch211-153b23.3	100	74.120	Mastacembelus_armatus
ENSACIG00000006968	si:ch211-153b23.3	100	73.409	ENSMZEG00005011450	si:ch211-153b23.3	100	73.409	Maylandia_zebra
ENSACIG00000006968	si:ch211-153b23.3	100	66.402	ENSMMOG00000004436	si:ch211-153b23.3	99	66.402	Mola_mola
ENSACIG00000006968	si:ch211-153b23.3	100	72.955	ENSNBRG00000013370	si:ch211-153b23.3	100	73.068	Neolamprologus_brichardi
ENSACIG00000006968	si:ch211-153b23.3	55	45.833	ENSONIG00000017875	si:ch211-153b23.4	56	45.833	Oreochromis_niloticus
ENSACIG00000006968	si:ch211-153b23.3	100	70.880	ENSORLG00000006161	si:ch211-153b23.3	99	70.880	Oryzias_latipes
ENSACIG00000006968	si:ch211-153b23.3	97	71.278	ENSORLG00020000910	si:ch211-153b23.3	100	71.278	Oryzias_latipes_hni
ENSACIG00000006968	si:ch211-153b23.3	97	70.877	ENSORLG00015003698	si:ch211-153b23.3	100	70.877	Oryzias_latipes_hsok
ENSACIG00000006968	si:ch211-153b23.3	100	71.896	ENSOMEG00000007661	si:ch211-153b23.3	99	71.896	Oryzias_melastigma
ENSACIG00000006968	si:ch211-153b23.3	99	69.048	ENSPKIG00000021029	-	94	69.048	Paramormyrops_kingsleyae
ENSACIG00000006968	si:ch211-153b23.3	97	95.035	ENSPKIG00000022450	si:ch211-153b23.3	93	95.035	Paramormyrops_kingsleyae
ENSACIG00000006968	si:ch211-153b23.3	83	77.551	ENSPMGG00000001311	si:ch211-153b23.3	100	77.551	Periophthalmus_magnuspinnatus
ENSACIG00000006968	si:ch211-153b23.3	100	74.157	ENSPFOG00000012289	si:ch211-153b23.3	99	74.157	Poecilia_formosa
ENSACIG00000006968	si:ch211-153b23.3	72	47.059	ENSPFOG00000012164	si:ch211-153b23.4	82	47.059	Poecilia_formosa
ENSACIG00000006968	si:ch211-153b23.3	99	74.886	ENSPLAG00000016320	si:ch211-153b23.3	100	74.886	Poecilia_latipinna
ENSACIG00000006968	si:ch211-153b23.3	55	46.914	ENSPMEG00000007538	si:ch211-153b23.4	56	46.914	Poecilia_mexicana
ENSACIG00000006968	si:ch211-153b23.3	100	92.121	ENSPMEG00000008884	si:ch211-153b23.3	93	92.121	Poecilia_mexicana
ENSACIG00000006968	si:ch211-153b23.3	100	73.068	ENSPNYG00000000251	si:ch211-153b23.3	100	73.182	Pundamilia_nyererei
ENSACIG00000006968	si:ch211-153b23.3	100	65.006	ENSPNAG00000019592	si:ch211-153b23.3	99	65.006	Pygocentrus_nattereri
ENSACIG00000006968	si:ch211-153b23.3	100	57.930	ENSSFOG00015010910	si:ch211-153b23.3	99	57.930	Scleropages_formosus
ENSACIG00000006968	si:ch211-153b23.3	66	67.857	ENSSFOG00015009030	-	88	67.857	Scleropages_formosus
ENSACIG00000006968	si:ch211-153b23.3	99	67.310	ENSSMAG00000005446	si:ch211-153b23.3	100	67.310	Scophthalmus_maximus
ENSACIG00000006968	si:ch211-153b23.3	100	66.140	ENSSLDG00000008629	si:ch211-153b23.3	100	66.140	Seriola_lalandi_dorsalis
ENSACIG00000006968	si:ch211-153b23.3	53	43.976	ENSTGUG00000005499	-	56	43.976	Taeniopygia_guttata
ENSACIG00000006968	si:ch211-153b23.3	99	69.620	ENSTRUG00000020530	si:ch211-153b23.3	100	69.620	Takifugu_rubripes
ENSACIG00000006968	si:ch211-153b23.3	100	69.398	ENSTNIG00000008962	si:ch211-153b23.3	99	69.398	Tetraodon_nigroviridis
ENSACIG00000006968	si:ch211-153b23.3	100	91.515	ENSXMAG00000029318	si:ch211-153b23.3	93	91.515	Xiphophorus_maculatus
ENSACIG00000006968	si:ch211-153b23.3	56	47.337	ENSXMAG00000009416	-	54	47.337	Xiphophorus_maculatus