EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006987 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 150774 bases
Position: chrCCOE01000820.1:260112-410885
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008950	RRM_1	PF00076.22	2.1e-31	1	2
ENSACIP00000008950	RRM_1	PF00076.22	2.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009221	-	1101	-	ENSACIP00000008950	366 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006987	-	85	72.871	ENSACIG00000021113	RBMS3	78	78.922
ENSACIG00000006987	-	51	36.250	ENSACIG00000015357	celf5a	56	36.250
ENSACIG00000006987	-	81	74.587	ENSACIG00000021498	RBMS1	77	73.786
ENSACIG00000006987	-	90	58.308	ENSACIG00000000113	rbms1a	88	58.075
ENSACIG00000006987	-	56	32.632	ENSACIG00000004685	pabpc1a	59	32.632
ENSACIG00000006987	-	81	78.378	ENSACIG00000021779	rbms2a	80	77.880
ENSACIG00000006987	-	56	35.556	ENSACIG00000018226	elavl1a	51	35.556
ENSACIG00000006987	-	50	38.860	ENSACIG00000010855	ELAVL2	75	38.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006987	-	81	92.905	ENSG00000144642	RBMS3	83	91.743	Homo_sapiens
ENSACIG00000006987	-	81	88.215	ENSAPOG00000007266	rbms3	73	87.748	Acanthochromis_polyacanthus
ENSACIG00000006987	-	89	97.239	ENSAPOG00000003432	-	78	97.239	Acanthochromis_polyacanthus
ENSACIG00000006987	-	60	90.909	ENSAMEG00000005947	RBMS3	73	90.909	Ailuropoda_melanoleuca
ENSACIG00000006987	-	80	88.514	ENSAOCG00000021274	rbms3	71	87.748	Amphiprion_ocellaris
ENSACIG00000006987	-	87	98.750	ENSAOCG00000024104	-	69	95.050	Amphiprion_ocellaris
ENSACIG00000006987	-	85	84.161	ENSAPEG00000016299	rbms3	80	87.748	Amphiprion_percula
ENSACIG00000006987	-	84	88.562	ENSAPEG00000009481	-	74	89.216	Amphiprion_percula
ENSACIG00000006987	-	81	88.215	ENSATEG00000024295	rbms3	71	87.748	Anabas_testudineus
ENSACIG00000006987	-	89	97.239	ENSATEG00000008433	-	78	97.239	Anabas_testudineus
ENSACIG00000006987	-	92	86.297	ENSAPLG00000012270	RBMS3	73	89.206	Anas_platyrhynchos
ENSACIG00000006987	-	81	93.581	ENSACAG00000028664	RBMS3	72	91.749	Anolis_carolinensis
ENSACIG00000006987	-	81	92.308	ENSANAG00000021899	RBMS3	70	91.176	Aotus_nancymaae
ENSACIG00000006987	-	85	84.013	ENSACLG00000018506	rbms3	86	80.251	Astatotilapia_calliptera
ENSACIG00000006987	-	87	98.433	ENSACLG00000008976	-	60	98.433	Astatotilapia_calliptera
ENSACIG00000006987	-	63	88.745	ENSAMXG00000043770	-	87	88.444	Astyanax_mexicanus
ENSACIG00000006987	-	81	93.243	ENSAMXG00000020388	rbms3	73	92.409	Astyanax_mexicanus
ENSACIG00000006987	-	86	88.889	ENSBTAG00000044062	RBMS3	76	91.176	Bos_taurus
ENSACIG00000006987	-	81	92.308	ENSCJAG00000004312	RBMS3	70	90.850	Callithrix_jacchus
ENSACIG00000006987	-	81	92.308	ENSCAFG00000005464	RBMS3	70	91.176	Canis_familiaris
ENSACIG00000006987	-	81	92.308	ENSCAFG00020024980	RBMS3	75	87.589	Canis_lupus_dingo
ENSACIG00000006987	-	81	92.905	ENSCHIG00000009144	RBMS3	72	91.419	Capra_hircus
ENSACIG00000006987	-	68	91.200	ENSTSYG00000002615	RBMS3	79	87.308	Carlito_syrichta
ENSACIG00000006987	-	81	84.407	ENSCAPG00000017783	RBMS3	77	83.498	Cavia_aperea
ENSACIG00000006987	-	81	92.230	ENSCPOG00000006457	RBMS3	73	91.118	Cavia_porcellus
ENSACIG00000006987	-	81	92.308	ENSCCAG00000008671	RBMS3	70	90.850	Cebus_capucinus
ENSACIG00000006987	-	81	91.973	ENSCATG00000013222	RBMS3	70	90.523	Cercocebus_atys
ENSACIG00000006987	-	81	92.230	ENSCLAG00000005866	RBMS3	72	91.089	Chinchilla_lanigera
ENSACIG00000006987	-	54	90.500	ENSCSAG00000009655	RBMS3	74	90.500	Chlorocebus_sabaeus
ENSACIG00000006987	-	73	91.852	ENSCHOG00000000758	RBMS3	62	91.852	Choloepus_hoffmanni
ENSACIG00000006987	-	81	93.243	ENSCPBG00000022678	RBMS3	80	91.749	Chrysemys_picta_bellii
ENSACIG00000006987	-	81	91.973	ENSCANG00000032137	RBMS3	70	90.523	Colobus_angolensis_palliatus
ENSACIG00000006987	-	81	90.541	ENSCGRG00001007243	Rbms3	81	84.969	Cricetulus_griseus_chok1gshd
ENSACIG00000006987	-	81	90.541	ENSCGRG00000004599	Rbms3	81	84.969	Cricetulus_griseus_crigri
ENSACIG00000006987	-	89	96.626	ENSCSEG00000014677	-	90	98.089	Cynoglossus_semilaevis
ENSACIG00000006987	-	81	87.879	ENSCSEG00000010011	RBMS3	79	81.940	Cynoglossus_semilaevis
ENSACIG00000006987	-	81	87.960	ENSCVAG00000022354	rbms3	72	87.417	Cyprinodon_variegatus
ENSACIG00000006987	-	87	98.433	ENSCVAG00000022814	-	91	98.714	Cyprinodon_variegatus
ENSACIG00000006987	-	81	94.257	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSACIG00000006987	-	81	92.568	ENSDNOG00000016645	RBMS3	70	91.089	Dasypus_novemcinctus
ENSACIG00000006987	-	81	91.892	ENSDORG00000007220	Rbms3	72	90.759	Dipodomys_ordii
ENSACIG00000006987	-	73	80.524	ENSETEG00000009485	-	61	80.524	Echinops_telfairi
ENSACIG00000006987	-	76	54.122	ENSEBUG00000005830	rbms3	86	55.263	Eptatretus_burgeri
ENSACIG00000006987	-	81	92.905	ENSEASG00005006152	RBMS3	72	91.419	Equus_asinus_asinus
ENSACIG00000006987	-	81	92.905	ENSECAG00000017871	RBMS3	72	91.419	Equus_caballus
ENSACIG00000006987	-	81	83.278	ENSEEUG00000014337	RBMS3	78	82.026	Erinaceus_europaeus
ENSACIG00000006987	-	85	85.535	ENSELUG00000002862	rbms3	77	88.514	Esox_lucius
ENSACIG00000006987	-	87	97.179	ENSELUG00000006905	-	81	97.525	Esox_lucius
ENSACIG00000006987	-	81	92.230	ENSFCAG00000002130	RBMS3	72	91.089	Felis_catus
ENSACIG00000006987	-	81	93.581	ENSFALG00000009165	RBMS3	72	92.079	Ficedula_albicollis
ENSACIG00000006987	-	81	92.230	ENSFDAG00000008278	RBMS3	72	91.089	Fukomys_damarensis
ENSACIG00000006987	-	86	78.328	ENSFHEG00000004787	RBMS3	81	80.731	Fundulus_heteroclitus
ENSACIG00000006987	-	83	95.738	ENSGMOG00000002600	-	73	95.738	Gadus_morhua
ENSACIG00000006987	-	81	93.581	ENSGALG00000011439	RBMS3	72	92.079	Gallus_gallus
ENSACIG00000006987	-	85	85.174	ENSGAFG00000000168	rbms3	85	87.375	Gambusia_affinis
ENSACIG00000006987	-	89	96.933	ENSGAFG00000003329	-	78	96.933	Gambusia_affinis
ENSACIG00000006987	-	55	92.040	ENSGAGG00000004039	RBMS3	74	92.040	Gopherus_agassizii
ENSACIG00000006987	-	81	92.308	ENSGGOG00000007228	RBMS3	70	90.850	Gorilla_gorilla
ENSACIG00000006987	-	58	90.141	ENSHBUG00000021196	rbms3	76	89.450	Haplochromis_burtoni
ENSACIG00000006987	-	88	98.131	ENSHBUG00000019785	-	72	96.024	Haplochromis_burtoni
ENSACIG00000006987	-	81	92.568	ENSHGLG00000002170	RBMS3	72	91.419	Heterocephalus_glaber_female
ENSACIG00000006987	-	81	92.568	ENSHGLG00100014278	RBMS3	72	91.419	Heterocephalus_glaber_male
ENSACIG00000006987	-	87	97.492	ENSHCOG00000007894	-	87	97.492	Hippocampus_comes
ENSACIG00000006987	-	81	93.243	ENSIPUG00000017680	rbms3	73	92.739	Ictalurus_punctatus
ENSACIG00000006987	-	82	92.000	ENSSTOG00000006324	RBMS3	72	91.749	Ictidomys_tridecemlineatus
ENSACIG00000006987	-	93	82.203	ENSJJAG00000014708	Rbms3	72	89.803	Jaculus_jaculus
ENSACIG00000006987	-	89	96.933	ENSKMAG00000012586	-	88	95.899	Kryptolebias_marmoratus
ENSACIG00000006987	-	80	88.475	ENSKMAG00000020500	rbms3	69	87.919	Kryptolebias_marmoratus
ENSACIG00000006987	-	59	74.672	ENSLBEG00000006677	rbms3	85	74.672	Labrus_bergylta
ENSACIG00000006987	-	88	97.819	ENSLBEG00000027388	-	78	96.319	Labrus_bergylta
ENSACIG00000006987	-	81	94.932	ENSLACG00000010581	RBMS3	73	92.763	Latimeria_chalumnae
ENSACIG00000006987	-	60	93.151	ENSLOCG00000002328	rbms3	75	93.151	Lepisosteus_oculatus
ENSACIG00000006987	-	81	91.973	ENSLAFG00000000354	RBMS3	70	90.850	Loxodonta_africana
ENSACIG00000006987	-	81	92.568	ENSMFAG00000033300	RBMS3	72	91.089	Macaca_fascicularis
ENSACIG00000006987	-	81	92.568	ENSMMUG00000004404	RBMS3	72	91.089	Macaca_mulatta
ENSACIG00000006987	-	86	88.254	ENSMNEG00000035839	RBMS3	76	90.523	Macaca_nemestrina
ENSACIG00000006987	-	81	91.973	ENSMLEG00000029464	RBMS3	70	90.523	Mandrillus_leucophaeus
ENSACIG00000006987	-	81	88.552	ENSMAMG00000024043	rbms3	71	88.449	Mastacembelus_armatus
ENSACIG00000006987	-	88	97.819	ENSMAMG00000002176	-	72	97.819	Mastacembelus_armatus
ENSACIG00000006987	-	81	87.542	ENSMZEG00005006308	rbms3	71	87.086	Maylandia_zebra
ENSACIG00000006987	-	90	95.758	ENSMZEG00005026469	-	74	95.758	Maylandia_zebra
ENSACIG00000006987	-	81	90.541	ENSMAUG00000016436	Rbms3	81	84.969	Mesocricetus_auratus
ENSACIG00000006987	-	81	92.308	ENSMICG00000049249	RBMS3	70	90.850	Microcebus_murinus
ENSACIG00000006987	-	81	90.203	ENSMOCG00000006997	Rbms3	81	84.969	Microtus_ochrogaster
ENSACIG00000006987	-	90	96.353	ENSMMOG00000015071	-	80	96.353	Mola_mola
ENSACIG00000006987	-	85	84.688	ENSMMOG00000008471	RBMS3	81	87.960	Mola_mola
ENSACIG00000006987	-	81	93.624	ENSMODG00000015125	RBMS3	66	93.939	Monodelphis_domestica
ENSACIG00000006987	-	88	98.131	ENSMALG00000009155	-	78	96.626	Monopterus_albus
ENSACIG00000006987	-	80	88.514	ENSMALG00000019536	RBMS3	71	87.748	Monopterus_albus
ENSACIG00000006987	-	83	88.158	MGP_CAROLIEiJ_G0032783	Rbms3	81	93.373	Mus_caroli
ENSACIG00000006987	-	81	89.865	ENSMUSG00000039607	Rbms3	81	94.578	Mus_musculus
ENSACIG00000006987	-	81	89.865	MGP_PahariEiJ_G0015650	Rbms3	81	94.578	Mus_pahari
ENSACIG00000006987	-	81	89.865	MGP_SPRETEiJ_G0033930	Rbms3	81	94.578	Mus_spretus
ENSACIG00000006987	-	81	92.308	ENSMPUG00000011956	RBMS3	70	91.176	Mustela_putorius_furo
ENSACIG00000006987	-	81	92.905	ENSMLUG00000000659	RBMS3	72	91.749	Myotis_lucifugus
ENSACIG00000006987	-	86	86.984	ENSNGAG00000014039	Rbms3	73	90.132	Nannospalax_galili
ENSACIG00000006987	-	89	96.626	ENSNBRG00000018065	-	78	96.626	Neolamprologus_brichardi
ENSACIG00000006987	-	81	92.308	ENSNLEG00000004129	RBMS3	70	90.850	Nomascus_leucogenys
ENSACIG00000006987	-	81	84.122	ENSMEUG00000004772	RBMS3	69	82.508	Notamacropus_eugenii
ENSACIG00000006987	-	81	91.973	ENSOPRG00000006808	RBMS3	60	90.523	Ochotona_princeps
ENSACIG00000006987	-	81	92.568	ENSODEG00000003651	RBMS3	72	91.419	Octodon_degus
ENSACIG00000006987	-	81	87.542	ENSONIG00000007172	rbms3	73	87.086	Oreochromis_niloticus
ENSACIG00000006987	-	81	92.929	ENSOANG00000010529	RBMS3	70	91.447	Ornithorhynchus_anatinus
ENSACIG00000006987	-	81	91.639	ENSOCUG00000004840	RBMS3	70	90.196	Oryctolagus_cuniculus
ENSACIG00000006987	-	81	87.000	ENSORLG00000005370	RBMS3	72	86.755	Oryzias_latipes
ENSACIG00000006987	-	89	96.319	ENSORLG00000002306	-	90	98.077	Oryzias_latipes
ENSACIG00000006987	-	89	96.319	ENSORLG00020008496	-	77	98.119	Oryzias_latipes_hni
ENSACIG00000006987	-	81	87.000	ENSORLG00020022674	RBMS3	72	86.755	Oryzias_latipes_hni
ENSACIG00000006987	-	89	96.319	ENSORLG00015015719	-	78	96.319	Oryzias_latipes_hsok
ENSACIG00000006987	-	81	87.333	ENSORLG00015005509	rbms3	72	87.086	Oryzias_latipes_hsok
ENSACIG00000006987	-	87	97.806	ENSOMEG00000007677	-	81	97.742	Oryzias_melastigma
ENSACIG00000006987	-	86	85.000	ENSOMEG00000014805	RBMS3	79	86.885	Oryzias_melastigma
ENSACIG00000006987	-	81	91.973	ENSOARG00000014684	RBMS3	70	90.523	Ovis_aries
ENSACIG00000006987	-	81	92.308	ENSPPAG00000036519	RBMS3	70	90.850	Pan_paniscus
ENSACIG00000006987	-	90	87.164	ENSPPRG00000002761	RBMS3	70	90.523	Panthera_pardus
ENSACIG00000006987	-	90	87.164	ENSPTIG00000011568	RBMS3	72	91.089	Panthera_tigris_altaica
ENSACIG00000006987	-	81	92.905	ENSPTRG00000014709	RBMS3	72	91.419	Pan_troglodytes
ENSACIG00000006987	-	81	91.973	ENSPANG00000010234	RBMS3	73	87.342	Papio_anubis
ENSACIG00000006987	-	50	93.443	ENSPKIG00000016025	-	67	90.526	Paramormyrops_kingsleyae
ENSACIG00000006987	-	59	92.166	ENSPKIG00000007989	-	84	92.166	Paramormyrops_kingsleyae
ENSACIG00000006987	-	81	92.905	ENSPSIG00000005269	RBMS3	72	91.419	Pelodiscus_sinensis
ENSACIG00000006987	-	89	97.554	ENSPMGG00000021683	-	89	97.523	Periophthalmus_magnuspinnatus
ENSACIG00000006987	-	85	83.962	ENSPMGG00000021544	rbms3	79	86.424	Periophthalmus_magnuspinnatus
ENSACIG00000006987	-	81	86.441	ENSPEMG00000001117	Rbms3	73	85.479	Peromyscus_maniculatus_bairdii
ENSACIG00000006987	-	84	90.032	ENSPCIG00000006106	RBMS3	79	88.365	Phascolarctos_cinereus
ENSACIG00000006987	-	80	88.514	ENSPFOG00000017887	rbms3	72	87.417	Poecilia_formosa
ENSACIG00000006987	-	69	85.827	ENSPLAG00000016866	-	67	85.827	Poecilia_latipinna
ENSACIG00000006987	-	89	97.239	ENSPMEG00000002993	-	78	97.239	Poecilia_mexicana
ENSACIG00000006987	-	87	98.750	ENSPREG00000018221	-	81	96.682	Poecilia_reticulata
ENSACIG00000006987	-	85	85.266	ENSPREG00000011880	rbms3	85	87.708	Poecilia_reticulata
ENSACIG00000006987	-	81	73.244	ENSPPYG00000014050	RBMS3	54	72.222	Pongo_abelii
ENSACIG00000006987	-	80	65.188	ENSPCAG00000006307	RBMS3	69	64.026	Procavia_capensis
ENSACIG00000006987	-	81	92.308	ENSPCOG00000017136	RBMS3	70	90.850	Propithecus_coquereli
ENSACIG00000006987	-	76	91.756	ENSPVAG00000014037	RBMS3	64	91.756	Pteropus_vampyrus
ENSACIG00000006987	-	89	96.626	ENSPNYG00000012624	-	78	96.626	Pundamilia_nyererei
ENSACIG00000006987	-	81	87.542	ENSPNYG00000010546	rbms3	86	80.251	Pundamilia_nyererei
ENSACIG00000006987	-	81	93.243	ENSPNAG00000001800	rbms3	73	92.409	Pygocentrus_nattereri
ENSACIG00000006987	-	50	91.257	ENSPNAG00000026763	-	74	91.617	Pygocentrus_nattereri
ENSACIG00000006987	-	81	90.203	ENSRNOG00000025881	Rbms3	82	84.663	Rattus_norvegicus
ENSACIG00000006987	-	81	91.639	ENSRBIG00000035863	RBMS3	70	90.196	Rhinopithecus_bieti
ENSACIG00000006987	-	81	91.639	ENSRROG00000027512	RBMS3	74	90.196	Rhinopithecus_roxellana
ENSACIG00000006987	-	81	92.308	ENSSBOG00000020232	RBMS3	70	90.850	Saimiri_boliviensis_boliviensis
ENSACIG00000006987	-	81	93.243	ENSSHAG00000002411	RBMS3	84	91.419	Sarcophilus_harrisii
ENSACIG00000006987	-	85	95.513	ENSSFOG00015008578	rbms3	80	95.513	Scleropages_formosus
ENSACIG00000006987	-	83	85.294	ENSSMAG00000004997	rbms3	80	86.486	Scophthalmus_maximus
ENSACIG00000006987	-	89	96.319	ENSSMAG00000020065	-	84	98.387	Scophthalmus_maximus
ENSACIG00000006987	-	80	88.514	ENSSDUG00000013656	RBMS3	84	82.566	Seriola_dumerili
ENSACIG00000006987	-	89	97.239	ENSSDUG00000019287	-	78	97.239	Seriola_dumerili
ENSACIG00000006987	-	80	88.851	ENSSLDG00000020276	RBMS3	70	88.079	Seriola_lalandi_dorsalis
ENSACIG00000006987	-	90	96.960	ENSSLDG00000013224	-	78	97.239	Seriola_lalandi_dorsalis
ENSACIG00000006987	-	86	74.286	ENSSARG00000000695	RBMS3	87	73.750	Sorex_araneus
ENSACIG00000006987	-	63	88.696	ENSSPUG00000017197	RBMS3	76	88.696	Sphenodon_punctatus
ENSACIG00000006987	-	90	97.264	ENSSPAG00000003983	-	74	91.718	Stegastes_partitus
ENSACIG00000006987	-	80	88.814	ENSSPAG00000020693	rbms3	83	87.748	Stegastes_partitus
ENSACIG00000006987	-	81	92.568	ENSSSCG00000036381	RBMS3	77	91.089	Sus_scrofa
ENSACIG00000006987	-	69	91.373	ENSTGUG00000003572	RBMS3	77	91.373	Taeniopygia_guttata
ENSACIG00000006987	-	81	87.205	ENSTRUG00000021719	RBMS3	70	86.957	Takifugu_rubripes
ENSACIG00000006987	-	73	98.127	ENSTRUG00000007482	-	71	93.031	Takifugu_rubripes
ENSACIG00000006987	-	81	92.905	ENSTBEG00000005362	RBMS3	82	91.419	Tupaia_belangeri
ENSACIG00000006987	-	81	91.639	ENSTTRG00000006202	RBMS3	70	90.196	Tursiops_truncatus
ENSACIG00000006987	-	81	92.905	ENSUMAG00000000263	RBMS3	76	91.749	Ursus_maritimus
ENSACIG00000006987	-	81	79.195	ENSVPAG00000003842	RBMS3	74	77.778	Vicugna_pacos
ENSACIG00000006987	-	81	92.308	ENSVVUG00000004660	RBMS3	94	92.627	Vulpes_vulpes
ENSACIG00000006987	-	61	88.393	ENSXETG00000032055	RBMS3	73	88.393	Xenopus_tropicalis
ENSACIG00000006987	-	86	80.831	ENSXCOG00000019600	-	78	80.831	Xiphophorus_couchianus
ENSACIG00000006987	-	85	84.953	ENSXMAG00000021783	rbms3	85	87.375	Xiphophorus_maculatus
ENSACIG00000006987	-	89	97.239	ENSXMAG00000014382	-	78	97.239	Xiphophorus_maculatus