EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000006997 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4060 bases
Position: chrCCOE01001249.1:817420-821479
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008958	Sua5_yciO_yrdC	PF01300.18	3.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009230	-	2562	-	ENSACIP00000008958	853 (aa)	-	-

Gene Model

Click here to download ENSACIG00000006997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000006997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000006997	si:ch211-153b23.4	81	44.910	ENSACIG00000006968	si:ch211-153b23.3	83	44.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000006997	si:ch211-153b23.4	95	87.021	ENSAPOG00000006178	si:ch211-153b23.4	94	87.021	Acanthochromis_polyacanthus
ENSACIG00000006997	si:ch211-153b23.4	96	85.888	ENSAPOG00000006144	si:ch211-153b23.4	94	87.081	Acanthochromis_polyacanthus
ENSACIG00000006997	si:ch211-153b23.4	93	82.161	ENSAOCG00000010999	si:ch211-153b23.4	97	82.161	Amphiprion_ocellaris
ENSACIG00000006997	si:ch211-153b23.4	98	83.035	ENSAPEG00000014665	si:ch211-153b23.4	98	83.035	Amphiprion_percula
ENSACIG00000006997	si:ch211-153b23.4	98	85.629	ENSATEG00000004948	si:ch211-153b23.4	95	85.629	Anabas_testudineus
ENSACIG00000006997	si:ch211-153b23.4	60	32.957	ENSATEG00000004956	si:ch211-153b23.3	58	32.957	Anabas_testudineus
ENSACIG00000006997	si:ch211-153b23.4	92	62.389	ENSAPLG00000013596	-	95	62.389	Anas_platyrhynchos
ENSACIG00000006997	si:ch211-153b23.4	98	88.609	ENSACLG00000005471	si:ch211-153b23.4	94	88.609	Astatotilapia_calliptera
ENSACIG00000006997	si:ch211-153b23.4	98	71.309	ENSAMXG00000013879	si:ch211-153b23.4	98	71.309	Astyanax_mexicanus
ENSACIG00000006997	si:ch211-153b23.4	95	81.358	ENSCSEG00000014838	si:ch211-153b23.4	96	81.358	Cynoglossus_semilaevis
ENSACIG00000006997	si:ch211-153b23.4	93	84.065	ENSCVAG00000021145	si:ch211-153b23.4	99	84.065	Cyprinodon_variegatus
ENSACIG00000006997	si:ch211-153b23.4	98	68.949	ENSDARG00000077169	si:ch211-153b23.4	96	68.949	Danio_rerio
ENSACIG00000006997	si:ch211-153b23.4	85	30.092	ENSDARG00000104919	si:ch211-153b23.3	84	30.092	Danio_rerio
ENSACIG00000006997	si:ch211-153b23.4	97	70.609	ENSELUG00000004961	si:ch211-153b23.4	93	70.609	Esox_lucius
ENSACIG00000006997	si:ch211-153b23.4	96	55.582	ENSFALG00000011343	-	96	55.582	Ficedula_albicollis
ENSACIG00000006997	si:ch211-153b23.4	92	84.411	ENSFHEG00000010001	si:ch211-153b23.4	98	84.411	Fundulus_heteroclitus
ENSACIG00000006997	si:ch211-153b23.4	84	82.988	ENSFHEG00000009888	si:ch211-153b23.4	79	82.988	Fundulus_heteroclitus
ENSACIG00000006997	si:ch211-153b23.4	87	83.580	ENSGAFG00000007442	si:ch211-153b23.4	89	83.580	Gambusia_affinis
ENSACIG00000006997	si:ch211-153b23.4	95	82.635	ENSGACG00000018253	si:ch211-153b23.4	95	82.635	Gasterosteus_aculeatus
ENSACIG00000006997	si:ch211-153b23.4	81	65.706	ENSGAGG00000024601	-	93	65.706	Gopherus_agassizii
ENSACIG00000006997	si:ch211-153b23.4	79	88.113	ENSHBUG00000000013	si:ch211-153b23.4	89	88.113	Haplochromis_burtoni
ENSACIG00000006997	si:ch211-153b23.4	94	72.603	ENSIPUG00000015205	si:ch211-153b23.4	95	72.603	Ictalurus_punctatus
ENSACIG00000006997	si:ch211-153b23.4	98	84.910	ENSKMAG00000006919	-	95	84.910	Kryptolebias_marmoratus
ENSACIG00000006997	si:ch211-153b23.4	92	86.862	ENSKMAG00000006829	si:ch211-153b23.4	96	86.862	Kryptolebias_marmoratus
ENSACIG00000006997	si:ch211-153b23.4	61	31.931	ENSLBEG00000026324	si:ch211-153b23.3	56	31.931	Labrus_bergylta
ENSACIG00000006997	si:ch211-153b23.4	98	83.848	ENSLBEG00000026309	si:ch211-153b23.4	96	83.848	Labrus_bergylta
ENSACIG00000006997	si:ch211-153b23.4	92	65.696	ENSLACG00000017592	si:ch211-153b23.4	94	65.696	Latimeria_chalumnae
ENSACIG00000006997	si:ch211-153b23.4	60	32.319	ENSMAMG00000009328	si:ch211-153b23.3	58	32.319	Mastacembelus_armatus
ENSACIG00000006997	si:ch211-153b23.4	95	89.219	ENSMAMG00000009358	si:ch211-153b23.4	99	89.219	Mastacembelus_armatus
ENSACIG00000006997	si:ch211-153b23.4	96	88.984	ENSMAMG00000009277	si:ch211-153b23.4	98	88.984	Mastacembelus_armatus
ENSACIG00000006997	si:ch211-153b23.4	95	88.381	ENSMZEG00005011433	si:ch211-153b23.4	99	88.381	Maylandia_zebra
ENSACIG00000006997	si:ch211-153b23.4	92	61.323	ENSMGAG00000005478	-	95	61.323	Meleagris_gallopavo
ENSACIG00000006997	si:ch211-153b23.4	90	84.955	ENSMMOG00000004425	si:ch211-153b23.4	98	84.548	Mola_mola
ENSACIG00000006997	si:ch211-153b23.4	92	88.408	ENSNBRG00000013392	si:ch211-153b23.4	98	88.408	Neolamprologus_brichardi
ENSACIG00000006997	si:ch211-153b23.4	99	88.228	ENSONIG00000017875	si:ch211-153b23.4	96	88.228	Oreochromis_niloticus
ENSACIG00000006997	si:ch211-153b23.4	97	82.630	ENSORLG00000006169	si:ch211-153b23.4	96	81.420	Oryzias_latipes
ENSACIG00000006997	si:ch211-153b23.4	99	82.012	ENSORLG00020009905	si:ch211-153b23.4	96	82.012	Oryzias_latipes_hni
ENSACIG00000006997	si:ch211-153b23.4	97	82.871	ENSORLG00015003709	si:ch211-153b23.4	95	82.871	Oryzias_latipes_hsok
ENSACIG00000006997	si:ch211-153b23.4	96	84.005	ENSOMEG00000007682	si:ch211-153b23.4	96	82.021	Oryzias_melastigma
ENSACIG00000006997	si:ch211-153b23.4	96	70.752	ENSPKIG00000025681	si:ch211-153b23.4	95	70.752	Paramormyrops_kingsleyae
ENSACIG00000006997	si:ch211-153b23.4	97	67.947	ENSPKIG00000014429	si:ch211-153b23.4	99	67.947	Paramormyrops_kingsleyae
ENSACIG00000006997	si:ch211-153b23.4	98	64.671	ENSPMGG00000001313	si:ch211-153b23.4	92	65.097	Periophthalmus_magnuspinnatus
ENSACIG00000006997	si:ch211-153b23.4	80	85.147	ENSPFOG00000012164	si:ch211-153b23.4	95	85.147	Poecilia_formosa
ENSACIG00000006997	si:ch211-153b23.4	60	33.144	ENSPFOG00000012289	si:ch211-153b23.3	59	33.144	Poecilia_formosa
ENSACIG00000006997	si:ch211-153b23.4	93	83.838	ENSPLAG00000016295	si:ch211-153b23.4	98	83.838	Poecilia_latipinna
ENSACIG00000006997	si:ch211-153b23.4	91	82.413	ENSPMEG00000007538	si:ch211-153b23.4	95	82.413	Poecilia_mexicana
ENSACIG00000006997	si:ch211-153b23.4	95	88.133	ENSPNYG00000000250	si:ch211-153b23.4	99	88.133	Pundamilia_nyererei
ENSACIG00000006997	si:ch211-153b23.4	97	72.859	ENSPNAG00000019554	si:ch211-153b23.4	94	72.859	Pygocentrus_nattereri
ENSACIG00000006997	si:ch211-153b23.4	97	72.727	ENSSFOG00015010891	si:ch211-153b23.4	95	72.727	Scleropages_formosus
ENSACIG00000006997	si:ch211-153b23.4	60	34.216	ENSSFOG00015010910	si:ch211-153b23.3	60	34.216	Scleropages_formosus
ENSACIG00000006997	si:ch211-153b23.4	98	67.773	ENSSFOG00015003920	-	96	67.773	Scleropages_formosus
ENSACIG00000006997	si:ch211-153b23.4	98	84.532	ENSSMAG00000010067	si:ch211-153b23.4	95	84.532	Scophthalmus_maximus
ENSACIG00000006997	si:ch211-153b23.4	93	86.700	ENSSDUG00000006671	si:ch211-153b23.4	99	86.700	Seriola_dumerili
ENSACIG00000006997	si:ch211-153b23.4	84	82.895	ENSSDUG00000006842	si:ch211-153b23.4	91	82.895	Seriola_dumerili
ENSACIG00000006997	si:ch211-153b23.4	78	85.479	ENSSDUG00000006931	si:ch211-153b23.4	91	85.479	Seriola_dumerili
ENSACIG00000006997	si:ch211-153b23.4	92	61.188	ENSTGUG00000005499	-	96	61.188	Taeniopygia_guttata
ENSACIG00000006997	si:ch211-153b23.4	93	82.412	ENSTRUG00000003247	si:ch211-153b23.4	98	82.412	Takifugu_rubripes
ENSACIG00000006997	si:ch211-153b23.4	60	32.696	ENSTRUG00000020530	si:ch211-153b23.3	59	32.696	Takifugu_rubripes
ENSACIG00000006997	si:ch211-153b23.4	60	30.095	ENSTNIG00000008962	si:ch211-153b23.3	56	30.095	Tetraodon_nigroviridis
ENSACIG00000006997	si:ch211-153b23.4	93	80.702	ENSTNIG00000008958	si:ch211-153b23.4	96	80.702	Tetraodon_nigroviridis
ENSACIG00000006997	si:ch211-153b23.4	96	55.399	ENSXETG00000004489	-	93	55.399	Xenopus_tropicalis
ENSACIG00000006997	si:ch211-153b23.4	94	84.769	ENSXMAG00000021388	si:ch211-153b23.4	96	84.769	Xiphophorus_maculatus
ENSACIG00000006997	si:ch211-153b23.4	97	83.293	ENSXMAG00000009416	-	97	83.293	Xiphophorus_maculatus