EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000007038 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 3417 bases
Position: chrCCOE01002881.1:802-4218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000008980	RVT_1	PF00078.27	1.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009251	-	3417	-	ENSACIP00000008980	1138 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000007038	-	100	76.734	ENSACIG00000012161	-	100	76.471
ENSACIG00000007038	-	90	85.531	ENSACIG00000013116	-	99	85.745
ENSACIG00000007038	-	77	95.791	ENSACIG00000009025	-	99	95.791
ENSACIG00000007038	-	92	70.695	ENSACIG00000010787	-	96	70.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007038	-	71	40.392	ENSAMXG00000042811	-	69	40.392	Astyanax_mexicanus
ENSACIG00000007038	-	73	37.791	ENSCPBG00000003842	-	60	38.670	Chrysemys_picta_bellii
ENSACIG00000007038	-	91	37.954	ENSCVAG00000004138	-	98	38.040	Cyprinodon_variegatus
ENSACIG00000007038	-	71	38.350	ENSELUG00000004597	-	84	38.350	Esox_lucius
ENSACIG00000007038	-	85	35.494	ENSELUG00000004618	-	86	35.671	Esox_lucius
ENSACIG00000007038	-	91	36.197	ENSFHEG00000002853	-	85	39.364	Fundulus_heteroclitus
ENSACIG00000007038	-	94	35.047	ENSFHEG00000002865	-	93	34.583	Fundulus_heteroclitus
ENSACIG00000007038	-	86	38.313	ENSFHEG00000007211	-	99	36.347	Fundulus_heteroclitus
ENSACIG00000007038	-	91	38.418	ENSFHEG00000022106	-	96	38.425	Fundulus_heteroclitus
ENSACIG00000007038	-	51	42.808	ENSGMOG00000005227	-	95	43.210	Gadus_morhua
ENSACIG00000007038	-	91	34.966	ENSHCOG00000007389	-	94	34.870	Hippocampus_comes
ENSACIG00000007038	-	90	34.495	ENSHCOG00000000471	-	76	38.594	Hippocampus_comes
ENSACIG00000007038	-	90	35.061	ENSHCOG00000007397	-	93	34.742	Hippocampus_comes
ENSACIG00000007038	-	90	30.819	ENSHCOG00000007436	-	77	32.584	Hippocampus_comes
ENSACIG00000007038	-	60	46.172	ENSLBEG00000006732	-	81	46.172	Labrus_bergylta
ENSACIG00000007038	-	60	47.100	ENSLBEG00000004576	-	82	47.100	Labrus_bergylta
ENSACIG00000007038	-	71	42.735	ENSLBEG00000003745	-	92	42.735	Labrus_bergylta
ENSACIG00000007038	-	69	33.666	ENSLACG00000006357	-	95	34.100	Latimeria_chalumnae
ENSACIG00000007038	-	50	33.391	ENSLACG00000009240	-	97	33.391	Latimeria_chalumnae
ENSACIG00000007038	-	91	33.696	ENSLOCG00000017064	-	99	33.605	Lepisosteus_oculatus
ENSACIG00000007038	-	83	38.153	ENSLOCG00000011928	-	80	39.666	Lepisosteus_oculatus
ENSACIG00000007038	-	93	45.172	ENSMAMG00000019985	-	90	45.395	Mastacembelus_armatus
ENSACIG00000007038	-	99	45.238	ENSONIG00000020875	-	96	45.190	Oreochromis_niloticus
ENSACIG00000007038	-	91	37.535	ENSOMEG00000015368	-	99	37.207	Oryzias_melastigma
ENSACIG00000007038	-	84	36.552	ENSPMGG00000017392	-	99	36.373	Periophthalmus_magnuspinnatus
ENSACIG00000007038	-	66	41.479	ENSPMGG00000001593	-	78	41.479	Periophthalmus_magnuspinnatus
ENSACIG00000007038	-	93	39.925	ENSPLAG00000022994	-	98	39.626	Poecilia_latipinna
ENSACIG00000007038	-	71	42.577	ENSPLAG00000023379	-	97	42.577	Poecilia_latipinna
ENSACIG00000007038	-	91	40.076	ENSPLAG00000011810	-	96	39.773	Poecilia_latipinna
ENSACIG00000007038	-	90	38.146	ENSPLAG00000011817	-	99	37.914	Poecilia_latipinna
ENSACIG00000007038	-	93	38.310	ENSPMEG00000003431	-	99	38.180	Poecilia_mexicana
ENSACIG00000007038	-	93	36.961	ENSPMEG00000008574	-	98	36.423	Poecilia_mexicana
ENSACIG00000007038	-	93	39.249	ENSPREG00000012484	-	93	39.159	Poecilia_reticulata
ENSACIG00000007038	-	97	38.441	ENSPREG00000005456	-	95	38.441	Poecilia_reticulata
ENSACIG00000007038	-	93	38.462	ENSPREG00000005756	-	96	38.462	Poecilia_reticulata
ENSACIG00000007038	-	90	36.205	ENSPNAG00000007038	-	77	40.120	Pygocentrus_nattereri
ENSACIG00000007038	-	90	30.841	ENSPNAG00000014625	-	90	31.086	Pygocentrus_nattereri
ENSACIG00000007038	-	90	36.731	ENSPNAG00000016635	-	75	40.667	Pygocentrus_nattereri
ENSACIG00000007038	-	76	36.618	ENSPNAG00000017596	-	88	36.983	Pygocentrus_nattereri
ENSACIG00000007038	-	89	35.727	ENSPNAG00000021754	-	68	39.683	Pygocentrus_nattereri
ENSACIG00000007038	-	72	41.294	ENSPNAG00000003539	-	67	41.557	Pygocentrus_nattereri
ENSACIG00000007038	-	76	41.991	ENSXCOG00000008881	-	91	43.276	Xiphophorus_couchianus
ENSACIG00000007038	-	91	36.688	ENSXCOG00000013093	-	79	42.803	Xiphophorus_couchianus
ENSACIG00000007038	-	91	38.314	ENSXMAG00000028672	-	92	38.159	Xiphophorus_maculatus