EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000007090 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 9944 bases
Position: chrCCOE01000538.1:135757-145700
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000009071	AARP2CN	PF08142.12	7.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009344	-	2436	-	ENSACIP00000009071	811 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007090	tsr1	98	57.196	ENSG00000167721	TSR1	98	57.214	Homo_sapiens
ENSACIG00000007090	tsr1	100	85.868	ENSAPOG00000020891	tsr1	100	86.707	Acanthochromis_polyacanthus
ENSACIG00000007090	tsr1	99	54.667	ENSAMEG00000007599	TSR1	99	54.557	Ailuropoda_melanoleuca
ENSACIG00000007090	tsr1	100	86.282	ENSAOCG00000023284	tsr1	100	86.402	Amphiprion_ocellaris
ENSACIG00000007090	tsr1	93	85.917	ENSAPEG00000008452	tsr1	100	86.047	Amphiprion_percula
ENSACIG00000007090	tsr1	100	84.349	ENSATEG00000021961	tsr1	100	84.349	Anabas_testudineus
ENSACIG00000007090	tsr1	90	59.333	ENSAPLG00000013422	TSR1	100	59.067	Anas_platyrhynchos
ENSACIG00000007090	tsr1	70	49.660	ENSACAG00000000859	TSR1	92	49.493	Anolis_carolinensis
ENSACIG00000007090	tsr1	98	56.858	ENSANAG00000031071	TSR1	98	56.804	Aotus_nancymaae
ENSACIG00000007090	tsr1	100	90.350	ENSACLG00000007595	tsr1	99	89.626	Astatotilapia_calliptera
ENSACIG00000007090	tsr1	51	74.762	ENSAMXG00000008470	tsr1	89	74.762	Astyanax_mexicanus
ENSACIG00000007090	tsr1	99	56.667	ENSBTAG00000004225	TSR1	99	56.773	Bos_taurus
ENSACIG00000007090	tsr1	96	39.623	WBGene00006497	tag-151	96	39.497	Caenorhabditis_elegans
ENSACIG00000007090	tsr1	97	56.484	ENSCJAG00000012456	TSR1	98	56.429	Callithrix_jacchus
ENSACIG00000007090	tsr1	89	54.336	ENSCAFG00000019273	-	100	58.006	Canis_familiaris
ENSACIG00000007090	tsr1	99	56.495	ENSCAFG00000002106	-	99	56.104	Canis_familiaris
ENSACIG00000007090	tsr1	99	56.250	ENSCAFG00020009728	TSR1	99	55.857	Canis_lupus_dingo
ENSACIG00000007090	tsr1	99	57.583	ENSCHIG00000023935	TSR1	99	57.565	Capra_hircus
ENSACIG00000007090	tsr1	99	56.810	ENSTSYG00000005468	TSR1	99	56.527	Carlito_syrichta
ENSACIG00000007090	tsr1	92	56.011	ENSCPOG00000014833	TSR1	99	56.101	Cavia_porcellus
ENSACIG00000007090	tsr1	92	55.350	ENSCCAG00000028962	TSR1	98	55.291	Cebus_capucinus
ENSACIG00000007090	tsr1	98	57.178	ENSCATG00000044262	TSR1	99	57.249	Cercocebus_atys
ENSACIG00000007090	tsr1	99	57.319	ENSCLAG00000005567	TSR1	99	57.160	Chinchilla_lanigera
ENSACIG00000007090	tsr1	98	57.302	ENSCSAG00000013788	TSR1	99	57.373	Chlorocebus_sabaeus
ENSACIG00000007090	tsr1	98	56.877	ENSCPBG00000020363	TSR1	97	57.125	Chrysemys_picta_bellii
ENSACIG00000007090	tsr1	96	44.221	ENSCING00000020658	-	99	44.221	Ciona_intestinalis
ENSACIG00000007090	tsr1	96	44.136	ENSCSAVG00000001875	-	100	44.136	Ciona_savignyi
ENSACIG00000007090	tsr1	99	55.556	ENSCGRG00001023942	Tsr1	99	55.802	Cricetulus_griseus_chok1gshd
ENSACIG00000007090	tsr1	100	78.287	ENSCSEG00000013009	tsr1	100	79.252	Cynoglossus_semilaevis
ENSACIG00000007090	tsr1	100	80.952	ENSCVAG00000000506	tsr1	100	82.488	Cyprinodon_variegatus
ENSACIG00000007090	tsr1	100	75.453	ENSDARG00000007744	tsr1	100	75.695	Danio_rerio
ENSACIG00000007090	tsr1	99	57.654	ENSDNOG00000004715	TSR1	99	59.361	Dasypus_novemcinctus
ENSACIG00000007090	tsr1	96	49.166	ENSDORG00000023234	-	99	47.980	Dipodomys_ordii
ENSACIG00000007090	tsr1	99	56.173	ENSDORG00000016371	-	99	56.173	Dipodomys_ordii
ENSACIG00000007090	tsr1	96	44.183	FBgn0037073	Tsr1	96	43.742	Drosophila_melanogaster
ENSACIG00000007090	tsr1	89	67.541	ENSETEG00000017534	TSR1	88	67.541	Echinops_telfairi
ENSACIG00000007090	tsr1	95	51.472	ENSEBUG00000013731	TSR1	98	51.216	Eptatretus_burgeri
ENSACIG00000007090	tsr1	99	57.213	ENSEASG00005009302	TSR1	97	57.213	Equus_asinus_asinus
ENSACIG00000007090	tsr1	99	57.230	ENSECAG00000009114	TSR1	99	57.090	Equus_caballus
ENSACIG00000007090	tsr1	100	74.132	ENSELUG00000020984	tsr1	96	74.251	Esox_lucius
ENSACIG00000007090	tsr1	99	56.265	ENSFCAG00000006313	TSR1	99	56.158	Felis_catus
ENSACIG00000007090	tsr1	100	58.283	ENSFALG00000006532	TSR1	99	57.920	Ficedula_albicollis
ENSACIG00000007090	tsr1	99	56.897	ENSFDAG00000006038	TSR1	99	56.527	Fukomys_damarensis
ENSACIG00000007090	tsr1	100	80.719	ENSFHEG00000003626	tsr1	99	81.078	Fundulus_heteroclitus
ENSACIG00000007090	tsr1	100	73.382	ENSGMOG00000010336	tsr1	100	73.472	Gadus_morhua
ENSACIG00000007090	tsr1	100	80.505	ENSGAFG00000012993	tsr1	99	81.107	Gambusia_affinis
ENSACIG00000007090	tsr1	100	82.339	ENSGACG00000010843	tsr1	100	82.339	Gasterosteus_aculeatus
ENSACIG00000007090	tsr1	98	56.646	ENSGAGG00000025619	-	99	56.473	Gopherus_agassizii
ENSACIG00000007090	tsr1	98	57.568	ENSGGOG00000001704	TSR1	98	57.463	Gorilla_gorilla
ENSACIG00000007090	tsr1	100	90.253	ENSHBUG00000017904	tsr1	100	89.922	Haplochromis_burtoni
ENSACIG00000007090	tsr1	96	49.491	ENSHGLG00000015688	-	98	49.042	Heterocephalus_glaber_female
ENSACIG00000007090	tsr1	99	57.178	ENSHGLG00000012806	-	99	56.950	Heterocephalus_glaber_female
ENSACIG00000007090	tsr1	99	57.178	ENSHGLG00100015392	TSR1	99	56.950	Heterocephalus_glaber_male
ENSACIG00000007090	tsr1	100	81.941	ENSHCOG00000001432	tsr1	100	81.450	Hippocampus_comes
ENSACIG00000007090	tsr1	100	72.847	ENSIPUG00000004618	tsr1	100	72.967	Ictalurus_punctatus
ENSACIG00000007090	tsr1	99	57.635	ENSSTOG00000011819	TSR1	99	58.426	Ictidomys_tridecemlineatus
ENSACIG00000007090	tsr1	91	54.206	ENSJJAG00000019505	Tsr1	95	54.228	Jaculus_jaculus
ENSACIG00000007090	tsr1	100	82.332	ENSKMAG00000005763	tsr1	99	83.253	Kryptolebias_marmoratus
ENSACIG00000007090	tsr1	100	83.473	ENSLBEG00000021823	tsr1	99	84.671	Labrus_bergylta
ENSACIG00000007090	tsr1	100	57.143	ENSLACG00000002197	TSR1	100	56.423	Latimeria_chalumnae
ENSACIG00000007090	tsr1	90	80.000	ENSLOCG00000006491	TSR1	98	80.000	Lepisosteus_oculatus
ENSACIG00000007090	tsr1	99	57.038	ENSMFAG00000021330	TSR1	99	57.497	Macaca_fascicularis
ENSACIG00000007090	tsr1	99	56.793	ENSMMUG00000017519	TSR1	99	57.249	Macaca_mulatta
ENSACIG00000007090	tsr1	99	57.038	ENSMNEG00000031382	TSR1	99	57.497	Macaca_nemestrina
ENSACIG00000007090	tsr1	98	57.054	ENSMLEG00000036733	TSR1	99	57.125	Mandrillus_leucophaeus
ENSACIG00000007090	tsr1	100	83.433	ENSMAMG00000017918	tsr1	99	83.671	Mastacembelus_armatus
ENSACIG00000007090	tsr1	100	90.109	ENSMZEG00005007477	tsr1	100	89.385	Maylandia_zebra
ENSACIG00000007090	tsr1	100	56.832	ENSMGAG00000005576	TSR1	100	56.469	Meleagris_gallopavo
ENSACIG00000007090	tsr1	99	57.726	ENSMICG00000012943	TSR1	99	57.707	Microcebus_murinus
ENSACIG00000007090	tsr1	99	56.388	ENSMOCG00000022764	Tsr1	99	56.350	Microtus_ochrogaster
ENSACIG00000007090	tsr1	100	84.000	ENSMMOG00000014280	tsr1	100	84.466	Mola_mola
ENSACIG00000007090	tsr1	99	57.598	ENSMODG00000010658	TSR1	99	57.230	Monodelphis_domestica
ENSACIG00000007090	tsr1	100	85.971	ENSMALG00000011681	tsr1	100	85.492	Monopterus_albus
ENSACIG00000007090	tsr1	99	55.515	MGP_CAROLIEiJ_G0016727	Tsr1	99	55.556	Mus_caroli
ENSACIG00000007090	tsr1	99	56.250	ENSMUSG00000038335	Tsr1	99	56.296	Mus_musculus
ENSACIG00000007090	tsr1	99	56.740	MGP_PahariEiJ_G0017864	Tsr1	99	56.667	Mus_pahari
ENSACIG00000007090	tsr1	99	56.250	MGP_SPRETEiJ_G0017570	Tsr1	99	56.296	Mus_spretus
ENSACIG00000007090	tsr1	81	59.459	ENSMPUG00000013000	TSR1	100	59.002	Mustela_putorius_furo
ENSACIG00000007090	tsr1	99	57.707	ENSMLUG00000003505	TSR1	99	57.688	Myotis_lucifugus
ENSACIG00000007090	tsr1	100	89.904	ENSNBRG00000020728	tsr1	99	90.144	Neolamprologus_brichardi
ENSACIG00000007090	tsr1	99	53.667	ENSMEUG00000015828	TSR1	99	53.497	Notamacropus_eugenii
ENSACIG00000007090	tsr1	100	89.734	ENSONIG00000013131	tsr1	100	90.217	Oreochromis_niloticus
ENSACIG00000007090	tsr1	95	55.133	ENSOANG00000008637	TSR1	100	53.690	Ornithorhynchus_anatinus
ENSACIG00000007090	tsr1	99	56.634	ENSOCUG00000014256	TSR1	99	56.618	Oryctolagus_cuniculus
ENSACIG00000007090	tsr1	100	83.053	ENSORLG00000004926	tsr1	99	83.053	Oryzias_latipes
ENSACIG00000007090	tsr1	100	82.671	ENSORLG00020008792	tsr1	99	83.755	Oryzias_latipes_hni
ENSACIG00000007090	tsr1	100	83.293	ENSORLG00015013838	tsr1	99	83.293	Oryzias_latipes_hsok
ENSACIG00000007090	tsr1	100	82.494	ENSOMEG00000004830	tsr1	99	82.812	Oryzias_melastigma
ENSACIG00000007090	tsr1	99	56.638	ENSOGAG00000004492	TSR1	99	56.671	Otolemur_garnettii
ENSACIG00000007090	tsr1	99	57.583	ENSOARG00000015437	TSR1	97	57.565	Ovis_aries
ENSACIG00000007090	tsr1	98	57.196	ENSPPAG00000036355	TSR1	98	57.214	Pan_paniscus
ENSACIG00000007090	tsr1	99	56.143	ENSPPRG00000015519	-	99	55.871	Panthera_pardus
ENSACIG00000007090	tsr1	99	56.143	ENSPTIG00000010608	TSR1	99	55.871	Panthera_tigris_altaica
ENSACIG00000007090	tsr1	98	57.196	ENSPTRG00000008547	TSR1	98	57.214	Pan_troglodytes
ENSACIG00000007090	tsr1	98	55.143	ENSPANG00000024463	TSR1	99	55.211	Papio_anubis
ENSACIG00000007090	tsr1	100	72.583	ENSPKIG00000013972	tsr1	100	72.256	Paramormyrops_kingsleyae
ENSACIG00000007090	tsr1	87	56.443	ENSPSIG00000018258	TSR1	99	56.723	Pelodiscus_sinensis
ENSACIG00000007090	tsr1	99	81.518	ENSPMGG00000011577	tsr1	99	82.331	Periophthalmus_magnuspinnatus
ENSACIG00000007090	tsr1	99	55.432	ENSPEMG00000018033	Tsr1	99	55.432	Peromyscus_maniculatus_bairdii
ENSACIG00000007090	tsr1	99	57.631	ENSPCIG00000009357	TSR1	97	57.631	Phascolarctos_cinereus
ENSACIG00000007090	tsr1	100	81.719	ENSPFOG00000004483	TSR1	100	82.203	Poecilia_formosa
ENSACIG00000007090	tsr1	100	81.250	ENSPLAG00000022320	tsr1	100	81.740	Poecilia_latipinna
ENSACIG00000007090	tsr1	100	80.861	ENSPMEG00000004577	tsr1	99	81.340	Poecilia_mexicana
ENSACIG00000007090	tsr1	97	81.281	ENSPREG00000010354	tsr1	96	81.550	Poecilia_reticulata
ENSACIG00000007090	tsr1	98	52.586	ENSPPYG00000007792	TSR1	98	52.774	Pongo_abelii
ENSACIG00000007090	tsr1	52	62.791	ENSPCAG00000012973	-	69	62.500	Procavia_capensis
ENSACIG00000007090	tsr1	99	57.054	ENSPCOG00000017928	TSR1	99	57.054	Propithecus_coquereli
ENSACIG00000007090	tsr1	99	56.914	ENSPVAG00000002162	TSR1	99	56.914	Pteropus_vampyrus
ENSACIG00000007090	tsr1	100	90.229	ENSPNYG00000016163	tsr1	99	89.505	Pundamilia_nyererei
ENSACIG00000007090	tsr1	100	74.109	ENSPNAG00000008659	tsr1	100	74.048	Pygocentrus_nattereri
ENSACIG00000007090	tsr1	99	55.407	ENSRNOG00000002980	Tsr1	99	56.458	Rattus_norvegicus
ENSACIG00000007090	tsr1	99	57.283	ENSRBIG00000040016	TSR1	99	57.405	Rhinopithecus_bieti
ENSACIG00000007090	tsr1	99	57.038	ENSRROG00000030361	TSR1	99	57.160	Rhinopithecus_roxellana
ENSACIG00000007090	tsr1	96	30.893	YDL060W	-	98	30.386	Saccharomyces_cerevisiae
ENSACIG00000007090	tsr1	98	57.214	ENSSBOG00000020785	TSR1	98	57.036	Saimiri_boliviensis_boliviensis
ENSACIG00000007090	tsr1	99	57.843	ENSSHAG00000011394	TSR1	99	57.740	Sarcophilus_harrisii
ENSACIG00000007090	tsr1	100	74.029	ENSSFOG00015005455	tsr1	100	74.636	Scleropages_formosus
ENSACIG00000007090	tsr1	100	82.134	ENSSMAG00000009504	tsr1	100	82.974	Scophthalmus_maximus
ENSACIG00000007090	tsr1	100	86.108	ENSSDUG00000012074	tsr1	99	87.066	Seriola_dumerili
ENSACIG00000007090	tsr1	100	86.315	ENSSLDG00000002031	tsr1	99	87.395	Seriola_lalandi_dorsalis
ENSACIG00000007090	tsr1	92	56.000	ENSSARG00000000759	TSR1	93	56.000	Sorex_araneus
ENSACIG00000007090	tsr1	100	57.024	ENSSPUG00000007042	TSR1	99	57.195	Sphenodon_punctatus
ENSACIG00000007090	tsr1	100	85.305	ENSSPAG00000021951	tsr1	100	86.260	Stegastes_partitus
ENSACIG00000007090	tsr1	99	57.196	ENSSSCG00000038534	TSR1	99	57.178	Sus_scrofa
ENSACIG00000007090	tsr1	90	61.465	ENSTGUG00000005883	TSR1	100	60.109	Taeniopygia_guttata
ENSACIG00000007090	tsr1	100	81.719	ENSTRUG00000004665	tsr1	100	81.763	Takifugu_rubripes
ENSACIG00000007090	tsr1	99	82.512	ENSTNIG00000016196	tsr1	100	82.861	Tetraodon_nigroviridis
ENSACIG00000007090	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSACIG00000007090	tsr1	99	57.460	ENSTTRG00000001177	TSR1	99	57.442	Tursiops_truncatus
ENSACIG00000007090	tsr1	99	55.814	ENSUAMG00000025160	TSR1	99	55.734	Ursus_americanus
ENSACIG00000007090	tsr1	95	55.696	ENSUMAG00000009294	TSR1	98	55.754	Ursus_maritimus
ENSACIG00000007090	tsr1	83	51.176	ENSVPAG00000000228	TSR1	99	49.710	Vicugna_pacos
ENSACIG00000007090	tsr1	99	56.250	ENSVVUG00000021767	TSR1	99	55.857	Vulpes_vulpes
ENSACIG00000007090	tsr1	99	53.012	ENSXETG00000023797	tsr1	100	52.814	Xenopus_tropicalis
ENSACIG00000007090	tsr1	100	82.805	ENSXCOG00000009635	tsr1	100	82.439	Xiphophorus_couchianus
ENSACIG00000007090	tsr1	100	81.227	ENSXMAG00000001397	tsr1	97	81.227	Xiphophorus_maculatus