EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000007144 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 21011 bases
Position: chrCCOE01000691.1:673224-694234
Accession: ZDB-GENE-080521-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000009189	RRM_1	PF00076.22	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009465	-	4389	-	ENSACIP00000009189	1462 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000007144	setd1a	81	56.667	ENSACIG00000016453	setd1ba	60	56.849

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007144	setd1a	83	98.010	ENSAPOG00000018002	setd1a	64	98.010	Acanthochromis_polyacanthus
ENSACIG00000007144	setd1a	98	89.189	ENSAOCG00000003663	setd1a	77	89.458	Amphiprion_ocellaris
ENSACIG00000007144	setd1a	96	90.315	ENSATEG00000022798	setd1a	76	88.288	Anabas_testudineus
ENSACIG00000007144	setd1a	86	78.289	ENSACAG00000007606	-	71	78.289	Anolis_carolinensis
ENSACIG00000007144	setd1a	99	93.417	ENSACLG00000024747	setd1a	77	91.333	Astatotilapia_calliptera
ENSACIG00000007144	setd1a	88	80.247	ENSAMXG00000009497	setd1a	70	84.797	Astyanax_mexicanus
ENSACIG00000007144	setd1a	51	67.361	ENSCPBG00000010830	-	100	46.149	Chrysemys_picta_bellii
ENSACIG00000007144	setd1a	99	88.288	ENSCSEG00000021605	setd1a	76	88.288	Cynoglossus_semilaevis
ENSACIG00000007144	setd1a	96	97.368	ENSCVAG00000011672	setd1a	76	89.855	Cyprinodon_variegatus
ENSACIG00000007144	setd1a	92	94.000	ENSDARG00000060030	setd1a	75	94.000	Danio_rerio
ENSACIG00000007144	setd1a	52	62.963	ENSECAG00000015162	SETD1A	54	62.092	Equus_caballus
ENSACIG00000007144	setd1a	98	81.571	ENSELUG00000020261	setd1a	75	76.966	Esox_lucius
ENSACIG00000007144	setd1a	99	79.727	ENSFHEG00000023258	setd1a	100	72.154	Fundulus_heteroclitus
ENSACIG00000007144	setd1a	81	84.483	ENSGAFG00000011698	setd1a	93	77.273	Gambusia_affinis
ENSACIG00000007144	setd1a	52	87.625	ENSGACG00000013688	setd1a	53	87.625	Gasterosteus_aculeatus
ENSACIG00000007144	setd1a	78	66.118	ENSGAGG00000010781	-	85	64.803	Gopherus_agassizii
ENSACIG00000007144	setd1a	99	93.417	ENSHBUG00000008893	setd1a	77	91.111	Haplochromis_burtoni
ENSACIG00000007144	setd1a	55	81.423	ENSHGLG00100010551	-	87	81.423	Heterocephalus_glaber_male
ENSACIG00000007144	setd1a	100	66.897	ENSHCOG00000003119	setd1a	100	66.376	Hippocampus_comes
ENSACIG00000007144	setd1a	89	88.000	ENSIPUG00000007413	setd1a	75	86.486	Ictalurus_punctatus
ENSACIG00000007144	setd1a	98	87.988	ENSKMAG00000009484	setd1a	76	87.988	Kryptolebias_marmoratus
ENSACIG00000007144	setd1a	99	89.342	ENSLBEG00000004399	setd1a	76	89.342	Labrus_bergylta
ENSACIG00000007144	setd1a	88	90.262	ENSMAMG00000021851	setd1a	100	70.202	Mastacembelus_armatus
ENSACIG00000007144	setd1a	99	93.730	ENSMZEG00005023141	setd1a	77	91.333	Maylandia_zebra
ENSACIG00000007144	setd1a	69	68.627	ENSMMOG00000016992	setd1a	100	69.632	Mola_mola
ENSACIG00000007144	setd1a	97	91.054	ENSMALG00000007401	setd1a	79	88.379	Monopterus_albus
ENSACIG00000007144	setd1a	55	77.228	ENSMLUG00000027303	-	65	77.228	Myotis_lucifugus
ENSACIG00000007144	setd1a	70	91.798	ENSNBRG00000004760	setd1a	81	92.045	Neolamprologus_brichardi
ENSACIG00000007144	setd1a	86	89.881	ENSONIG00000009854	setd1a	85	87.356	Oreochromis_niloticus
ENSACIG00000007144	setd1a	60	89.423	ENSOCUG00000022182	-	53	51.779	Oryctolagus_cuniculus
ENSACIG00000007144	setd1a	98	94.118	ENSORLG00000002213	setd1a	76	89.028	Oryzias_latipes
ENSACIG00000007144	setd1a	98	94.118	ENSORLG00020011897	setd1a	76	89.028	Oryzias_latipes_hni
ENSACIG00000007144	setd1a	98	94.118	ENSORLG00015004826	setd1a	76	89.342	Oryzias_latipes_hsok
ENSACIG00000007144	setd1a	99	94.737	ENSOMEG00000019732	setd1a	76	89.688	Oryzias_melastigma
ENSACIG00000007144	setd1a	51	97.727	ENSPKIG00000017668	setd1a	65	93.750	Paramormyrops_kingsleyae
ENSACIG00000007144	setd1a	99	92.163	ENSPFOG00000013669	setd1a	78	91.875	Poecilia_formosa
ENSACIG00000007144	setd1a	99	92.163	ENSPLAG00000009294	setd1a	76	91.875	Poecilia_latipinna
ENSACIG00000007144	setd1a	99	92.476	ENSPMEG00000005864	setd1a	76	92.188	Poecilia_mexicana
ENSACIG00000007144	setd1a	99	92.163	ENSPREG00000010201	setd1a	76	91.875	Poecilia_reticulata
ENSACIG00000007144	setd1a	75	71.845	ENSPVAG00000011049	-	76	71.707	Pteropus_vampyrus
ENSACIG00000007144	setd1a	99	93.730	ENSPNYG00000014139	setd1a	77	91.265	Pundamilia_nyererei
ENSACIG00000007144	setd1a	84	80.864	ENSPNAG00000019165	setd1a	73	85.135	Pygocentrus_nattereri
ENSACIG00000007144	setd1a	90	81.290	ENSSFOG00015007013	setd1a	53	95.556	Scleropages_formosus
ENSACIG00000007144	setd1a	99	88.889	ENSSMAG00000008846	setd1a	80	85.511	Scophthalmus_maximus
ENSACIG00000007144	setd1a	94	100.000	ENSSDUG00000022142	setd1a	77	90.909	Seriola_dumerili
ENSACIG00000007144	setd1a	94	100.000	ENSSLDG00000018250	setd1a	77	90.909	Seriola_lalandi_dorsalis
ENSACIG00000007144	setd1a	98	89.790	ENSSPAG00000007822	setd1a	77	90.060	Stegastes_partitus
ENSACIG00000007144	setd1a	91	87.688	ENSTRUG00000008953	setd1a	82	84.659	Takifugu_rubripes
ENSACIG00000007144	setd1a	87	76.860	ENSTNIG00000014930	setd1a	93	71.529	Tetraodon_nigroviridis
ENSACIG00000007144	setd1a	55	79.530	ENSVVUG00000027687	-	64	62.418	Vulpes_vulpes
ENSACIG00000007144	setd1a	55	77.049	ENSXETG00000001921	setd1a	73	47.007	Xenopus_tropicalis
ENSACIG00000007144	setd1a	97	93.458	ENSXCOG00000017585	setd1a	77	93.458	Xiphophorus_couchianus
ENSACIG00000007144	setd1a	99	92.790	ENSXMAG00000008021	setd1a	76	92.500	Xiphophorus_maculatus