EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000007277 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
25909 bases
Position
chrCCOE01000538.1:534319-560227
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000009319tRNA_anti-codonPF01336.253.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000009598-1662-ENSACIP00000009319553 (aa)--
Gene Model
Click here to download ENSACIG00000007277's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007277's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000007277rpa19954.344ENSACIG00000012881RPA19954.344
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000007277rpa19460.181ENSAPOG00000019409RPA17960.181Acanthochromis_polyacanthus
ENSACIG00000007277rpa19977.083ENSAPOG00000011658rpa110073.611Acanthochromis_polyacanthus
ENSACIG00000007277rpa19958.644ENSAMEG00000007706RPA19558.644Ailuropoda_melanoleuca
ENSACIG00000007277rpa19978.299ENSAOCG00000023376rpa110075.309Amphiprion_ocellaris
ENSACIG00000007277rpa19952.320ENSAOCG00000009003RPA19652.404Amphiprion_ocellaris
ENSACIG00000007277rpa19978.299ENSAPEG00000008634rpa110075.352Amphiprion_percula
ENSACIG00000007277rpa17561.556ENSAPEG00000019132RPA19651.487Amphiprion_percula
ENSACIG00000007277rpa19977.233ENSATEG00000022024rpa19977.233Anabas_testudineus
ENSACIG00000007277rpa19953.514ENSATEG00000006443RPA19653.514Anabas_testudineus
ENSACIG00000007277rpa19949.170ENSAPLG00000012442RPA19849.849Anas_platyrhynchos
ENSACIG00000007277rpa19951.959ENSACAG00000014490RPA19552.470Anolis_carolinensis
ENSACIG00000007277rpa19957.288ENSANAG00000023456RPA19857.288Aotus_nancymaae
ENSACIG00000007277rpa19954.886ENSACLG00000005223RPA19654.886Astatotilapia_calliptera
ENSACIG00000007277rpa19781.383ENSACLG00000006640rpa19981.383Astatotilapia_calliptera
ENSACIG00000007277rpa19971.107ENSAMXG00000008418rpa19969.097Astyanax_mexicanus
ENSACIG00000007277rpa19958.947ENSBTAG00000009711RPA19558.947Bos_taurus
ENSACIG00000007277rpa17132.692WBGene00017546rpa-16132.692Caenorhabditis_elegans
ENSACIG00000007277rpa19956.197ENSCJAG00000001848RPA19656.537Callithrix_jacchus
ENSACIG00000007277rpa19958.234ENSCAFG00000019249RPA19558.404Canis_familiaris
ENSACIG00000007277rpa19958.234ENSCAFG00020009847RPA19558.404Canis_lupus_dingo
ENSACIG00000007277rpa19957.458ENSCHIG00000026308RPA19658.065Capra_hircus
ENSACIG00000007277rpa19956.876ENSTSYG00000003482-9556.876Carlito_syrichta
ENSACIG00000007277rpa19957.797ENSCPOG00000000035RPA19657.797Cavia_porcellus
ENSACIG00000007277rpa19951.404ENSCCAG00000010981RPA19551.754Cebus_capucinus
ENSACIG00000007277rpa19953.820ENSCLAG00000015045-9553.820Chinchilla_lanigera
ENSACIG00000007277rpa19957.458ENSCLAG00000005185-9657.458Chinchilla_lanigera
ENSACIG00000007277rpa19952.189ENSCSAG00000013833RPA19552.189Chlorocebus_sabaeus
ENSACIG00000007277rpa19956.973ENSCHOG00000013540-9956.973Choloepus_hoffmanni
ENSACIG00000007277rpa17463.073ENSCHOG00000009454-9963.073Choloepus_hoffmanni
ENSACIG00000007277rpa19957.922ENSCPBG00000020377RPA19958.275Chrysemys_picta_bellii
ENSACIG00000007277rpa19940.893ENSCING00000023482-9540.893Ciona_intestinalis
ENSACIG00000007277rpa19957.266ENSCANG00000030911RPA19757.266Colobus_angolensis_palliatus
ENSACIG00000007277rpa19957.360ENSCGRG00001008197Rpa19557.530Cricetulus_griseus_chok1gshd
ENSACIG00000007277rpa18457.905ENSCGRG00000000582Rpa19958.103Cricetulus_griseus_crigri
ENSACIG00000007277rpa19973.288ENSCSEG00000013066rpa19673.288Cynoglossus_semilaevis
ENSACIG00000007277rpa19949.088ENSCSEG00000012726RPA19950.257Cynoglossus_semilaevis
ENSACIG00000007277rpa18657.117ENSCVAG00000013446-8257.117Cyprinodon_variegatus
ENSACIG00000007277rpa19976.117ENSCVAG00000019431rpa19974.240Cyprinodon_variegatus
ENSACIG00000007277rpa19968.458ENSDARG00000003938rpa19668.458Danio_rerio
ENSACIG00000007277rpa19958.333ENSDNOG00000017218RPA19558.333Dasypus_novemcinctus
ENSACIG00000007277rpa19957.288ENSDORG00000006199Rpa19757.458Dipodomys_ordii
ENSACIG00000007277rpa19939.559FBgn0010173RpA-709540.855Drosophila_melanogaster
ENSACIG00000007277rpa17658.763ENSETEG00000017608RPA16258.763Echinops_telfairi
ENSACIG00000007277rpa19958.834ENSEASG00005009372RPA19958.554Equus_asinus_asinus
ENSACIG00000007277rpa19958.574ENSECAG00000023886RPA19558.574Equus_caballus
ENSACIG00000007277rpa17161.575ENSEEUG00000002186-6861.575Erinaceus_europaeus
ENSACIG00000007277rpa19154.376ENSELUG00000006136RPA19954.376Esox_lucius
ENSACIG00000007277rpa19971.552ENSELUG00000021071rpa19571.552Esox_lucius
ENSACIG00000007277rpa19957.966ENSFCAG00000006306RPA19557.966Felis_catus
ENSACIG00000007277rpa19957.288ENSFALG00000006575RPA19557.288Ficedula_albicollis
ENSACIG00000007277rpa19958.744ENSFDAG00000007720RPA19658.744Fukomys_damarensis
ENSACIG00000007277rpa19974.828ENSFHEG00000003580rpa19674.828Fundulus_heteroclitus
ENSACIG00000007277rpa19967.596ENSGMOG00000010382rpa19667.596Gadus_morhua
ENSACIG00000007277rpa19956.388ENSGALG00000003072RPA19556.388Gallus_gallus
ENSACIG00000007277rpa19953.548ENSGAFG00000020953RPA19653.191Gambusia_affinis
ENSACIG00000007277rpa19976.471ENSGAFG00000012916rpa19676.471Gambusia_affinis
ENSACIG00000007277rpa19973.875ENSGACG00000010856rpa19673.875Gasterosteus_aculeatus
ENSACIG00000007277rpa19957.922ENSGAGG00000013611RPA19557.922Gopherus_agassizii
ENSACIG00000007277rpa19957.886ENSGGOG00000014186RPA19557.886Gorilla_gorilla
ENSACIG00000007277rpa110084.602ENSHBUG00000017773rpa19684.602Haplochromis_burtoni
ENSACIG00000007277rpa19952.305ENSHBUG00000009348RPA19852.305Haplochromis_burtoni
ENSACIG00000007277rpa19957.895ENSHGLG00000008846RPA19658.065Heterocephalus_glaber_female
ENSACIG00000007277rpa19957.895ENSHGLG00100017755-9658.065Heterocephalus_glaber_male
ENSACIG00000007277rpa19950.515ENSHGLG00100002005-9550.515Heterocephalus_glaber_male
ENSACIG00000007277rpa19953.820ENSHGLG00100000799-9553.820Heterocephalus_glaber_male
ENSACIG00000007277rpa19965.816ENSHCOG00000001401rpa19665.816Hippocampus_comes
ENSACIG00000007277rpa19841.536ENSHCOG00000000351RPA19341.536Hippocampus_comes
ENSACIG00000007277rpa19969.983ENSIPUG00000004400rpa19669.983Ictalurus_punctatus
ENSACIG00000007277rpa19756.207ENSSTOG00000022475RPA19656.207Ictidomys_tridecemlineatus
ENSACIG00000007277rpa19958.404ENSJJAG00000000876Rpa19858.404Jaculus_jaculus
ENSACIG00000007277rpa19972.696ENSKMAG00000005605rpa19672.867Kryptolebias_marmoratus
ENSACIG00000007277rpa19954.467ENSKMAG00000000234RPA19654.467Kryptolebias_marmoratus
ENSACIG00000007277rpa19759.545ENSLBEG00000002281RPA18259.545Labrus_bergylta
ENSACIG00000007277rpa19974.699ENSLBEG00000021604rpa19674.699Labrus_bergylta
ENSACIG00000007277rpa18255.123ENSLACG00000007210RPA19955.123Latimeria_chalumnae
ENSACIG00000007277rpa19965.180ENSLOCG00000006397rpa19665.352Lepisosteus_oculatus
ENSACIG00000007277rpa19956.784ENSLAFG00000015354RPA19656.784Loxodonta_africana
ENSACIG00000007277rpa18662.322ENSMFAG00000036138-9762.805Macaca_fascicularis
ENSACIG00000007277rpa19952.397ENSMMUG00000002442-9552.397Macaca_mulatta
ENSACIG00000007277rpa19958.421ENSMMUG00000011604-9757.627Macaca_mulatta
ENSACIG00000007277rpa19949.396ENSMNEG00000029837-9549.396Macaca_nemestrina
ENSACIG00000007277rpa19956.706ENSMNEG00000031632-9857.119Macaca_nemestrina
ENSACIG00000007277rpa19953.716ENSMLEG00000038768-9854.223Mandrillus_leucophaeus
ENSACIG00000007277rpa19978.609ENSMAMG00000017993rpa19678.609Mastacembelus_armatus
ENSACIG00000007277rpa19261.163ENSMAMG00000020097RPA18060.780Mastacembelus_armatus
ENSACIG00000007277rpa110084.602ENSMZEG00005007551rpa19684.602Maylandia_zebra
ENSACIG00000007277rpa19954.886ENSMZEG00005024731RPA19654.886Maylandia_zebra
ENSACIG00000007277rpa19956.218ENSMGAG00000005315RPA19556.218Meleagris_gallopavo
ENSACIG00000007277rpa19957.385ENSMAUG00000010474Rpa19857.922Mesocricetus_auratus
ENSACIG00000007277rpa19958.262ENSMICG00000012867RPA19558.262Microcebus_murinus
ENSACIG00000007277rpa19957.850ENSMOCG00000013019Rpa19557.850Microtus_ochrogaster
ENSACIG00000007277rpa19975.393ENSMMOG00000014292rpa19975.130Mola_mola
ENSACIG00000007277rpa19956.098ENSMMOG00000010868RPA19556.098Mola_mola
ENSACIG00000007277rpa110056.757ENSMODG00000010549RPA19656.757Monodelphis_domestica
ENSACIG00000007277rpa19961.364ENSMALG00000001208RPA18461.364Monopterus_albus
ENSACIG00000007277rpa19978.435ENSMALG00000011453rpa19678.435Monopterus_albus
ENSACIG00000007277rpa19957.627MGP_CAROLIEiJ_G0016734Rpa19557.895Mus_caroli
ENSACIG00000007277rpa19957.215ENSMUSG00000000751Rpa19657.479Mus_musculus
ENSACIG00000007277rpa19957.841MGP_PahariEiJ_G0017871Rpa19558.108Mus_pahari
ENSACIG00000007277rpa19957.119MGP_SPRETEiJ_G0017577Rpa19657.383Mus_spretus
ENSACIG00000007277rpa19958.744ENSMPUG00000013119RPA19558.744Mustela_putorius_furo
ENSACIG00000007277rpa19957.725ENSMLUG00000006113RPA19557.725Myotis_lucifugus
ENSACIG00000007277rpa19957.725ENSNGAG00000004522Rpa19457.725Nannospalax_galili
ENSACIG00000007277rpa19980.877ENSNBRG00000020595rpa110080.877Neolamprologus_brichardi
ENSACIG00000007277rpa19957.317ENSNBRG00000009672RPA19457.317Neolamprologus_brichardi
ENSACIG00000007277rpa19957.868ENSNLEG00000017149RPA19557.797Nomascus_leucogenys
ENSACIG00000007277rpa18457.773ENSMEUG00000006714RPA17957.773Notamacropus_eugenii
ENSACIG00000007277rpa19956.689ENSODEG00000009038RPA19756.689Octodon_degus
ENSACIG00000007277rpa110083.051ENSONIG00000013135rpa19683.051Oreochromis_niloticus
ENSACIG00000007277rpa19957.119ENSOANG00000010880RPA19757.119Ornithorhynchus_anatinus
ENSACIG00000007277rpa19955.735ENSOCUG00000001504RPA19655.735Oryctolagus_cuniculus
ENSACIG00000007277rpa19975.261ENSORLG00000004856rpa19675.261Oryzias_latipes
ENSACIG00000007277rpa19950.874ENSORLG00000003368RPA19650.874Oryzias_latipes
ENSACIG00000007277rpa19975.436ENSORLG00020008980rpa19675.436Oryzias_latipes_hni
ENSACIG00000007277rpa19955.297ENSORLG00020015284RPA18755.297Oryzias_latipes_hni
ENSACIG00000007277rpa16365.352ENSORLG00015005867-8165.352Oryzias_latipes_hsok
ENSACIG00000007277rpa19951.378ENSORLG00015020383RPA19651.378Oryzias_latipes_hsok
ENSACIG00000007277rpa19975.436ENSORLG00015013982rpa19675.436Oryzias_latipes_hsok
ENSACIG00000007277rpa19853.792ENSOMEG00000011040RPA19953.792Oryzias_melastigma
ENSACIG00000007277rpa19973.503ENSOMEG00000004704rpa19873.503Oryzias_melastigma
ENSACIG00000007277rpa19957.385ENSOGAG00000005581-9557.385Otolemur_garnettii
ENSACIG00000007277rpa17355.769ENSOGAG00000029379-9355.769Otolemur_garnettii
ENSACIG00000007277rpa19957.458ENSOARG00000014479RPA19658.065Ovis_aries
ENSACIG00000007277rpa19958.206ENSPPAG00000039680RPA19558.136Pan_paniscus
ENSACIG00000007277rpa19958.136ENSPPRG00000011807RPA19558.136Panthera_pardus
ENSACIG00000007277rpa19958.136ENSPTIG00000007898RPA19558.136Panthera_tigris_altaica
ENSACIG00000007277rpa19958.206ENSPTRG00000008539RPA19558.136Pan_troglodytes
ENSACIG00000007277rpa19957.046ENSPANG00000024592RPA19657.458Papio_anubis
ENSACIG00000007277rpa18775.720ENSPKIG00000008053rpa18076.337Paramormyrops_kingsleyae
ENSACIG00000007277rpa19958.234ENSPSIG00000015617RPA19758.234Pelodiscus_sinensis
ENSACIG00000007277rpa19973.868ENSPMGG00000011589rpa19873.868Periophthalmus_magnuspinnatus
ENSACIG00000007277rpa19954.059ENSPMGG00000000543RPA19955.296Periophthalmus_magnuspinnatus
ENSACIG00000007277rpa19958.092ENSPEMG00000021061Rpa19558.092Peromyscus_maniculatus_bairdii
ENSACIG00000007277rpa19955.932ENSPCIG00000019049RPA19556.102Phascolarctos_cinereus
ENSACIG00000007277rpa19976.562ENSPFOG00000003987rpa19676.562Poecilia_formosa
ENSACIG00000007277rpa18658.004ENSPLAG00000008844-8358.004Poecilia_latipinna
ENSACIG00000007277rpa19976.389ENSPLAG00000004984rpa19676.389Poecilia_latipinna
ENSACIG00000007277rpa19976.736ENSPMEG00000020602rpa19676.736Poecilia_mexicana
ENSACIG00000007277rpa18757.358ENSPMEG00000003627-8356.660Poecilia_mexicana
ENSACIG00000007277rpa18776.299ENSPREG00000010174rpa18176.520Poecilia_reticulata
ENSACIG00000007277rpa19261.416ENSPREG00000010119RPA17861.416Poecilia_reticulata
ENSACIG00000007277rpa19958.092ENSPCOG00000001799RPA19558.092Propithecus_coquereli
ENSACIG00000007277rpa19957.313ENSPVAG00000002149RPA19557.313Pteropus_vampyrus
ENSACIG00000007277rpa110084.775ENSPNYG00000016316rpa110081.272Pundamilia_nyererei
ENSACIG00000007277rpa19954.723ENSPNYG00000024165RPA19654.723Pundamilia_nyererei
ENSACIG00000007277rpa19963.993ENSPNAG00000008599rpa19663.509Pygocentrus_nattereri
ENSACIG00000007277rpa19960.154ENSRNOG00000003123Rpa19558.603Rattus_norvegicus
ENSACIG00000007277rpa19957.046ENSRBIG00000036587RPA19657.046Rhinopithecus_bieti
ENSACIG00000007277rpa19958.246ENSRROG00000043278RPA19558.246Rhinopithecus_roxellana
ENSACIG00000007277rpa18731.115YAR007CRFA18131.115Saccharomyces_cerevisiae
ENSACIG00000007277rpa19457.143ENSSBOG00000030233RPA19757.500Saimiri_boliviensis_boliviensis
ENSACIG00000007277rpa19956.684ENSSHAG00000007969RPA19557.360Sarcophilus_harrisii
ENSACIG00000007277rpa19971.379ENSSFOG00015005362rpa18871.379Scleropages_formosus
ENSACIG00000007277rpa19950.469ENSSMAG00000019746RPA19650.469Scophthalmus_maximus
ENSACIG00000007277rpa19980.069ENSSDUG00000011949rpa19680.069Seriola_dumerili
ENSACIG00000007277rpa19261.468ENSSDUG00000016358RPA17961.312Seriola_dumerili
ENSACIG00000007277rpa19980.416ENSSLDG00000011806rpa19680.416Seriola_lalandi_dorsalis
ENSACIG00000007277rpa19260.780ENSSLDG00000020784RPA17960.633Seriola_lalandi_dorsalis
ENSACIG00000007277rpa18656.735ENSSARG00000007506RPA18156.735Sorex_araneus
ENSACIG00000007277rpa19955.993ENSSPUG00000007223RPA19855.993Sphenodon_punctatus
ENSACIG00000007277rpa19978.609ENSSPAG00000009903rpa19678.609Stegastes_partitus
ENSACIG00000007277rpa19956.696ENSSPAG00000011165RPA19756.326Stegastes_partitus
ENSACIG00000007277rpa19957.958ENSSSCG00000017822RPA19858.234Sus_scrofa
ENSACIG00000007277rpa19956.803ENSTGUG00000005775RPA19556.803Taeniopygia_guttata
ENSACIG00000007277rpa19975.044ENSTRUG00000003616rpa19675.044Takifugu_rubripes
ENSACIG00000007277rpa19959.579ENSTRUG00000000405RPA18359.404Takifugu_rubripes
ENSACIG00000007277rpa19975.980ENSTNIG00000016199rpa19676.239Tetraodon_nigroviridis
ENSACIG00000007277rpa17562.955ENSTBEG00000002709RPA17462.955Tupaia_belangeri
ENSACIG00000007277rpa19956.706ENSTTRG00000001169RPA19557.385Tursiops_truncatus
ENSACIG00000007277rpa18775.000ENSUAMG00000015676RPA18975.000Ursus_americanus
ENSACIG00000007277rpa19958.406ENSUMAG00000009328RPA19558.406Ursus_maritimus
ENSACIG00000007277rpa19956.537ENSVPAG00000009443RPA19656.537Vicugna_pacos
ENSACIG00000007277rpa19958.065ENSVVUG00000021715RPA19558.234Vulpes_vulpes
ENSACIG00000007277rpa19960.642ENSXETG00000013538rpa19562.093Xenopus_tropicalis
ENSACIG00000007277rpa19954.799ENSXCOG00000009899-9954.799Xiphophorus_couchianus
ENSACIG00000007277rpa18883.402ENSXCOG00000010068rpa18483.402Xiphophorus_couchianus
ENSACIG00000007277rpa19361.416ENSXMAG00000010333RPA17861.416Xiphophorus_maculatus
ENSACIG00000007277rpa19975.779ENSXMAG00000004102rpa19975.714Xiphophorus_maculatus

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