EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000007516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-147l19.2
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3952 bases
Position: chrCCOE01000579.1:1130916-1134867
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000009600	RNA_pol_3_Rpc31	PF11705.8	8.5e-23	1	2
ENSACIP00000009600	RNA_pol_3_Rpc31	PF11705.8	8.5e-23	2	2
ENSACIP00000009594	RNA_pol_3_Rpc31	PF11705.8	7.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000009879	-	600	-	ENSACIP00000009594	199 (aa)	-	-
ENSACIT00000009885	-	543	-	ENSACIP00000009600	180 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007516	-	73	66.272	ENSAPOG00000011247	-	87	66.272	Acanthochromis_polyacanthus
ENSACIG00000007516	-	100	68.664	ENSAOCG00000024467	-	100	65.899	Amphiprion_ocellaris
ENSACIG00000007516	-	100	68.664	ENSAPEG00000016584	-	100	65.899	Amphiprion_percula
ENSACIG00000007516	-	100	61.927	ENSATEG00000002207	-	93	61.927	Anabas_testudineus
ENSACIG00000007516	-	100	67.179	ENSCSEG00000015309	-	100	66.667	Cynoglossus_semilaevis
ENSACIG00000007516	-	100	66.820	ENSCVAG00000007423	-	100	64.055	Cyprinodon_variegatus
ENSACIG00000007516	-	89	47.525	ENSGMOG00000017219	-	100	47.297	Gadus_morhua
ENSACIG00000007516	-	100	63.594	ENSGAFG00000009490	-	100	63.594	Gambusia_affinis
ENSACIG00000007516	-	100	56.034	ENSGACG00000010567	-	100	57.391	Gasterosteus_aculeatus
ENSACIG00000007516	-	100	60.280	ENSHCOG00000019088	-	100	60.748	Hippocampus_comes
ENSACIG00000007516	-	100	62.673	ENSKMAG00000007413	-	100	63.134	Kryptolebias_marmoratus
ENSACIG00000007516	-	100	75.648	ENSLBEG00000022698	-	100	73.057	Labrus_bergylta
ENSACIG00000007516	-	100	77.103	ENSMZEG00005013662	-	100	77.103	Maylandia_zebra
ENSACIG00000007516	-	100	66.845	ENSMMOG00000005508	-	100	66.845	Mola_mola
ENSACIG00000007516	-	100	69.545	ENSONIG00000011803	-	98	69.545	Oreochromis_niloticus
ENSACIG00000007516	-	100	62.963	ENSORLG00000021873	-	94	62.037	Oryzias_latipes
ENSACIG00000007516	-	100	63.889	ENSORLG00015022482	-	82	62.037	Oryzias_latipes_hsok
ENSACIG00000007516	-	100	62.037	ENSOMEG00000007659	-	100	60.648	Oryzias_melastigma
ENSACIG00000007516	-	100	57.727	ENSPFOG00000007520	-	100	53.782	Poecilia_formosa
ENSACIG00000007516	-	100	67.281	ENSPLAG00000012172	-	100	64.516	Poecilia_latipinna
ENSACIG00000007516	-	100	67.281	ENSPMEG00000017122	-	100	64.516	Poecilia_mexicana
ENSACIG00000007516	-	69	60.248	ENSPREG00000005692	-	100	55.901	Poecilia_reticulata
ENSACIG00000007516	-	72	76.552	ENSSMAG00000007987	-	74	76.552	Scophthalmus_maximus
ENSACIG00000007516	-	100	71.628	ENSSDUG00000018449	-	100	70.233	Seriola_dumerili
ENSACIG00000007516	-	100	70.698	ENSSLDG00000021071	-	100	68.372	Seriola_lalandi_dorsalis
ENSACIG00000007516	-	100	68.664	ENSSPAG00000004432	-	100	65.899	Stegastes_partitus
ENSACIG00000007516	-	100	60.930	ENSTRUG00000000973	-	100	58.605	Takifugu_rubripes
ENSACIG00000007516	-	100	66.820	ENSXMAG00000023321	-	100	64.055	Xiphophorus_maculatus