EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000007875 (Gene tree)
Gene ID: -
Gene Symbol: slbp2
Alias: zgc:158856
Full Name: stem-loop binding protein 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 9350 bases
Position: chrCCOE01001033.1:114430-123779
Accession: ZDB-GENE-070112-1722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000010065	SLBP_RNA_bind	PF15247.6	1.6e-30	1	1
ENSACIP00000010073	SLBP_RNA_bind	PF15247.6	1.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000010361	-	960	-	ENSACIP00000010065	319 (aa)	-	-
ENSACIT00000010369	-	984	-	ENSACIP00000010073	327 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007875	slbp2	96	56.782	ENSAPOG00000004873	slbp2	98	59.539	Acanthochromis_polyacanthus
ENSACIG00000007875	slbp2	97	71.810	ENSAOCG00000016241	slbp2	95	69.876	Amphiprion_ocellaris
ENSACIG00000007875	slbp2	83	73.741	ENSAPEG00000008972	slbp2	98	73.741	Amphiprion_percula
ENSACIG00000007875	slbp2	83	75.524	ENSATEG00000009765	slbp2	95	75.524	Anabas_testudineus
ENSACIG00000007875	slbp2	97	77.545	ENSACLG00000000965	slbp2	97	77.545	Astatotilapia_calliptera
ENSACIG00000007875	slbp2	97	77.545	ENSACLG00000001252	slbp2	97	77.545	Astatotilapia_calliptera
ENSACIG00000007875	slbp2	95	48.036	ENSAMXG00000029210	slbp2	96	48.036	Astyanax_mexicanus
ENSACIG00000007875	slbp2	54	42.614	ENSCAFG00000032438	SLBP2	57	42.614	Canis_familiaris
ENSACIG00000007875	slbp2	97	63.533	ENSCSEG00000006662	slbp2	97	63.533	Cynoglossus_semilaevis
ENSACIG00000007875	slbp2	84	64.794	ENSCVAG00000003498	slbp2	83	64.794	Cyprinodon_variegatus
ENSACIG00000007875	slbp2	95	50.784	ENSDARG00000069428	slbp2	96	50.784	Danio_rerio
ENSACIG00000007875	slbp2	94	51.506	ENSELUG00000021799	slbp2	95	51.506	Esox_lucius
ENSACIG00000007875	slbp2	81	58.123	ENSGMOG00000003044	slbp2	99	58.845	Gadus_morhua
ENSACIG00000007875	slbp2	89	68.512	ENSGAFG00000009788	slbp2	98	69.204	Gambusia_affinis
ENSACIG00000007875	slbp2	97	76.471	ENSHBUG00000019207	slbp2	97	76.471	Haplochromis_burtoni
ENSACIG00000007875	slbp2	93	66.978	ENSHCOG00000002192	slbp2	92	66.978	Hippocampus_comes
ENSACIG00000007875	slbp2	82	51.481	ENSIPUG00000024079	slbp2	83	51.481	Ictalurus_punctatus
ENSACIG00000007875	slbp2	95	71.254	ENSKMAG00000005391	-	93	71.254	Kryptolebias_marmoratus
ENSACIG00000007875	slbp2	97	71.726	ENSLBEG00000001991	slbp2	97	71.726	Labrus_bergylta
ENSACIG00000007875	slbp2	97	68.935	ENSMAMG00000022433	slbp2	97	69.231	Mastacembelus_armatus
ENSACIG00000007875	slbp2	97	77.545	ENSMZEG00005027825	slbp2	97	77.545	Maylandia_zebra
ENSACIG00000007875	slbp2	80	67.816	ENSMMOG00000016838	slbp2	91	68.582	Mola_mola
ENSACIG00000007875	slbp2	91	66.032	ENSMALG00000009687	slbp2	92	65.579	Monopterus_albus
ENSACIG00000007875	slbp2	93	63.300	ENSNBRG00000017849	slbp2	96	63.300	Neolamprologus_brichardi
ENSACIG00000007875	slbp2	93	76.687	ENSONIG00000017877	slbp2	94	76.687	Oreochromis_niloticus
ENSACIG00000007875	slbp2	94	68.615	ENSORLG00000025890	slbp2	93	69.538	Oryzias_latipes
ENSACIG00000007875	slbp2	94	68.308	ENSORLG00020003230	slbp2	93	69.231	Oryzias_latipes_hni
ENSACIG00000007875	slbp2	94	68.308	ENSORLG00015007694	slbp2	93	69.231	Oryzias_latipes_hsok
ENSACIG00000007875	slbp2	94	69.753	ENSOMEG00000017456	slbp2	93	70.679	Oryzias_melastigma
ENSACIG00000007875	slbp2	91	47.923	ENSPKIG00000008757	slbp2	99	47.436	Paramormyrops_kingsleyae
ENSACIG00000007875	slbp2	74	54.468	ENSPMGG00000008118	slbp2	59	86.517	Periophthalmus_magnuspinnatus
ENSACIG00000007875	slbp2	95	70.062	ENSPFOG00000021993	slbp2	93	71.280	Poecilia_formosa
ENSACIG00000007875	slbp2	95	70.625	ENSPLAG00000006548	-	93	71.562	Poecilia_latipinna
ENSACIG00000007875	slbp2	95	70.062	ENSPLAG00000019220	slbp2	93	70.988	Poecilia_latipinna
ENSACIG00000007875	slbp2	95	70.062	ENSPMEG00000024341	slbp2	93	70.988	Poecilia_mexicana
ENSACIG00000007875	slbp2	85	49.270	ENSPREG00000001384	-	84	50.000	Poecilia_reticulata
ENSACIG00000007875	slbp2	89	64.912	ENSPNYG00000022514	slbp2	97	65.157	Pundamilia_nyererei
ENSACIG00000007875	slbp2	95	49.848	ENSPNAG00000013685	slbp2	96	49.848	Pygocentrus_nattereri
ENSACIG00000007875	slbp2	60	51.232	ENSSFOG00015015666	-	92	51.232	Scleropages_formosus
ENSACIG00000007875	slbp2	97	69.486	ENSSMAG00000011121	slbp2	98	69.486	Scophthalmus_maximus
ENSACIG00000007875	slbp2	97	73.860	ENSSDUG00000023370	slbp2	97	72.997	Seriola_dumerili
ENSACIG00000007875	slbp2	95	59.016	ENSSLDG00000008723	slbp2	83	59.016	Seriola_lalandi_dorsalis
ENSACIG00000007875	slbp2	83	77.455	ENSSPAG00000011574	slbp2	97	77.737	Stegastes_partitus
ENSACIG00000007875	slbp2	57	38.798	ENSSSCG00000023691	-	85	38.798	Sus_scrofa
ENSACIG00000007875	slbp2	97	65.970	ENSTRUG00000021937	slbp2	96	65.970	Takifugu_rubripes
ENSACIG00000007875	slbp2	95	70.062	ENSXMAG00000007005	slbp2	93	70.988	Xiphophorus_maculatus