EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000007967 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2209 bases
Position: chrCCOE01001144.1:83164-85372
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000010211	RIO1	PF01163.22	3.4e-05	1	1
ENSACIP00000010197	RIO1	PF01163.22	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000010493	-	981	-	ENSACIP00000010197	326 (aa)	-	-
ENSACIT00000010507	-	654	-	ENSACIP00000010211	217 (aa)	-	-

Gene Model

Click here to download ENSACIG00000007967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000007967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000007967	-	97	37.719	ENSACIG00000007843	mapk12b	79	34.899
ENSACIG00000007967	-	97	34.081	ENSACIG00000020826	mapk8b	78	32.573
ENSACIG00000007967	-	82	34.302	ENSACIG00000015277	rps6ka4	68	30.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000007967	-	99	84.071	ENSAPOG00000022651	-	90	90.236	Acanthochromis_polyacanthus
ENSACIG00000007967	-	99	83.628	ENSAPEG00000023702	-	93	90.604	Amphiprion_percula
ENSACIG00000007967	-	97	65.455	ENSCING00000000662	-	100	68.636	Ciona_intestinalis
ENSACIG00000007967	-	98	64.126	ENSCSAVG00000000006	-	99	62.637	Ciona_savignyi
ENSACIG00000007967	-	98	76.018	ENSCSEG00000005706	-	99	79.464	Cynoglossus_semilaevis
ENSACIG00000007967	-	100	82.488	ENSMAMG00000007306	-	99	82.488	Mastacembelus_armatus
ENSACIG00000007967	-	99	87.168	ENSMZEG00005019656	-	99	93.665	Maylandia_zebra
ENSACIG00000007967	-	97	82.805	ENSNBRG00000001226	-	58	87.248	Neolamprologus_brichardi
ENSACIG00000007967	-	97	88.688	ENSONIG00000011659	-	83	93.289	Oreochromis_niloticus
ENSACIG00000007967	-	91	78.744	ENSPMGG00000020544	-	88	84.541	Periophthalmus_magnuspinnatus
ENSACIG00000007967	-	100	87.225	ENSPNYG00000006499	-	99	93.665	Pundamilia_nyererei