EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000008075 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat containing 6C1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 12598 bases
Position: chrCCOE01001093.1:281440-294037
Accession: ZDB-GENE-030131-7440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000010345	RRM_1	PF00076.22	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000010641	-	4848	-	ENSACIP00000010345	1615 (aa)	-	-

Gene Model

Click here to download ENSACIG00000008075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000008075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000008075	tnrc6c1	98	54.130	ENSG00000078687	TNRC6C	94	50.000	Homo_sapiens
ENSACIG00000008075	tnrc6c1	99	80.969	ENSAPOG00000019749	tnrc6c1	99	80.431	Acanthochromis_polyacanthus
ENSACIG00000008075	tnrc6c1	98	53.466	ENSAMEG00000013756	TNRC6C	97	52.338	Ailuropoda_melanoleuca
ENSACIG00000008075	tnrc6c1	99	78.697	ENSAOCG00000023968	tnrc6c1	100	79.093	Amphiprion_ocellaris
ENSACIG00000008075	tnrc6c1	99	78.867	ENSAPEG00000009020	tnrc6c1	100	79.263	Amphiprion_percula
ENSACIG00000008075	tnrc6c1	98	54.812	ENSAPLG00000005456	TNRC6C	89	51.967	Anas_platyrhynchos
ENSACIG00000008075	tnrc6c1	99	50.027	ENSACAG00000016198	TNRC6C	92	48.657	Anolis_carolinensis
ENSACIG00000008075	tnrc6c1	98	54.545	ENSANAG00000021554	TNRC6C	91	52.885	Aotus_nancymaae
ENSACIG00000008075	tnrc6c1	100	87.789	ENSACLG00000000424	tnrc6c1	100	87.789	Astatotilapia_calliptera
ENSACIG00000008075	tnrc6c1	97	53.060	ENSBTAG00000018658	TNRC6C	89	53.067	Bos_taurus
ENSACIG00000008075	tnrc6c1	98	54.067	ENSCJAG00000019431	TNRC6C	91	52.541	Callithrix_jacchus
ENSACIG00000008075	tnrc6c1	79	54.290	ENSCAFG00000005224	TNRC6C	88	52.921	Canis_familiaris
ENSACIG00000008075	tnrc6c1	90	51.959	ENSCAFG00020006661	TNRC6C	91	52.563	Canis_lupus_dingo
ENSACIG00000008075	tnrc6c1	97	53.203	ENSCHIG00000026004	TNRC6C	94	52.177	Capra_hircus
ENSACIG00000008075	tnrc6c1	79	54.170	ENSTSYG00000005403	TNRC6C	94	50.359	Carlito_syrichta
ENSACIG00000008075	tnrc6c1	74	50.000	ENSCAPG00000007307	TNRC6C	90	46.946	Cavia_aperea
ENSACIG00000008075	tnrc6c1	74	54.356	ENSCPOG00000000467	TNRC6C	97	50.967	Cavia_porcellus
ENSACIG00000008075	tnrc6c1	98	55.432	ENSCCAG00000030524	TNRC6C	91	53.140	Cebus_capucinus
ENSACIG00000008075	tnrc6c1	98	54.440	ENSCATG00000033135	TNRC6C	94	50.359	Cercocebus_atys
ENSACIG00000008075	tnrc6c1	79	52.885	ENSCLAG00000011139	TNRC6C	90	51.381	Chinchilla_lanigera
ENSACIG00000008075	tnrc6c1	98	54.714	ENSCSAG00000005167	TNRC6C	93	48.441	Chlorocebus_sabaeus
ENSACIG00000008075	tnrc6c1	57	66.387	ENSCHOG00000000088	TNRC6C	53	65.546	Choloepus_hoffmanni
ENSACIG00000008075	tnrc6c1	99	48.799	ENSCPBG00000027960	TNRC6C	99	47.343	Chrysemys_picta_bellii
ENSACIG00000008075	tnrc6c1	79	54.646	ENSCANG00000041771	TNRC6C	91	52.974	Colobus_angolensis_palliatus
ENSACIG00000008075	tnrc6c1	98	52.123	ENSCGRG00001022686	Tnrc6c	94	47.227	Cricetulus_griseus_chok1gshd
ENSACIG00000008075	tnrc6c1	98	52.450	ENSCGRG00000018041	Tnrc6c	94	47.227	Cricetulus_griseus_crigri
ENSACIG00000008075	tnrc6c1	99	69.807	ENSCSEG00000012744	tnrc6c1	96	69.972	Cynoglossus_semilaevis
ENSACIG00000008075	tnrc6c1	99	57.805	ENSDARG00000076847	tnrc6c1	99	59.988	Danio_rerio
ENSACIG00000008075	tnrc6c1	79	53.315	ENSDNOG00000003247	TNRC6C	95	47.800	Dasypus_novemcinctus
ENSACIG00000008075	tnrc6c1	78	49.931	ENSDORG00000004558	Tnrc6c	88	48.654	Dipodomys_ordii
ENSACIG00000008075	tnrc6c1	85	53.388	ENSETEG00000005527	TNRC6C	64	53.083	Echinops_telfairi
ENSACIG00000008075	tnrc6c1	90	51.862	ENSEASG00005004799	TNRC6C	94	48.026	Equus_asinus_asinus
ENSACIG00000008075	tnrc6c1	98	53.168	ENSECAG00000012486	TNRC6C	93	47.239	Equus_caballus
ENSACIG00000008075	tnrc6c1	83	56.222	ENSEEUG00000010008	TNRC6C	76	55.005	Erinaceus_europaeus
ENSACIG00000008075	tnrc6c1	92	51.374	ENSFCAG00000028358	TNRC6C	90	51.783	Felis_catus
ENSACIG00000008075	tnrc6c1	78	54.478	ENSFALG00000000848	TNRC6C	94	50.058	Ficedula_albicollis
ENSACIG00000008075	tnrc6c1	96	52.820	ENSFDAG00000010368	TNRC6C	99	47.386	Fukomys_damarensis
ENSACIG00000008075	tnrc6c1	99	74.531	ENSFHEG00000002936	tnrc6c1	100	73.639	Fundulus_heteroclitus
ENSACIG00000008075	tnrc6c1	95	56.450	ENSGALG00000001725	TNRC6C	94	54.138	Gallus_gallus
ENSACIG00000008075	tnrc6c1	99	75.682	ENSGAFG00000019019	tnrc6c1	100	73.273	Gambusia_affinis
ENSACIG00000008075	tnrc6c1	99	70.487	ENSGACG00000012320	tnrc6c1	92	71.101	Gasterosteus_aculeatus
ENSACIG00000008075	tnrc6c1	99	50.053	ENSGAGG00000022043	TNRC6C	99	48.767	Gopherus_agassizii
ENSACIG00000008075	tnrc6c1	98	54.167	ENSGGOG00000011304	TNRC6C	94	48.477	Gorilla_gorilla
ENSACIG00000008075	tnrc6c1	99	88.491	ENSHBUG00000010846	tnrc6c1	100	88.372	Haplochromis_burtoni
ENSACIG00000008075	tnrc6c1	98	52.335	ENSHGLG00000004809	TNRC6C	93	47.115	Heterocephalus_glaber_female
ENSACIG00000008075	tnrc6c1	98	51.710	ENSHGLG00100012597	TNRC6C	93	46.805	Heterocephalus_glaber_male
ENSACIG00000008075	tnrc6c1	99	57.199	ENSIPUG00000000818	tnrc6c1	67	62.470	Ictalurus_punctatus
ENSACIG00000008075	tnrc6c1	95	53.584	ENSSTOG00000009101	TNRC6C	93	51.958	Ictidomys_tridecemlineatus
ENSACIG00000008075	tnrc6c1	97	52.450	ENSJJAG00000017055	Tnrc6c	88	50.823	Jaculus_jaculus
ENSACIG00000008075	tnrc6c1	97	75.841	ENSKMAG00000021023	tnrc6c1	100	74.151	Kryptolebias_marmoratus
ENSACIG00000008075	tnrc6c1	87	66.480	ENSLACG00000015283	TNRC6C	89	65.922	Latimeria_chalumnae
ENSACIG00000008075	tnrc6c1	98	71.370	ENSLOCG00000013377	tnrc6c1	90	70.825	Lepisosteus_oculatus
ENSACIG00000008075	tnrc6c1	79	52.814	ENSLAFG00000011122	TNRC6C	99	46.883	Loxodonta_africana
ENSACIG00000008075	tnrc6c1	98	54.440	ENSMFAG00000043943	TNRC6C	94	50.359	Macaca_fascicularis
ENSACIG00000008075	tnrc6c1	98	54.783	ENSMMUG00000011924	TNRC6C	94	48.953	Macaca_mulatta
ENSACIG00000008075	tnrc6c1	98	54.372	ENSMNEG00000030405	TNRC6C	94	48.893	Macaca_nemestrina
ENSACIG00000008075	tnrc6c1	98	54.440	ENSMLEG00000033436	TNRC6C	94	50.359	Mandrillus_leucophaeus
ENSACIG00000008075	tnrc6c1	99	75.227	ENSMAMG00000023613	tnrc6c1	100	73.303	Mastacembelus_armatus
ENSACIG00000008075	tnrc6c1	100	87.789	ENSMZEG00005010920	tnrc6c1	100	87.789	Maylandia_zebra
ENSACIG00000008075	tnrc6c1	98	49.897	ENSMGAG00000003906	TNRC6C	89	48.481	Meleagris_gallopavo
ENSACIG00000008075	tnrc6c1	89	51.639	ENSMAUG00000021618	Tnrc6c	88	50.171	Mesocricetus_auratus
ENSACIG00000008075	tnrc6c1	79	53.650	ENSMICG00000003952	TNRC6C	94	49.850	Microcebus_murinus
ENSACIG00000008075	tnrc6c1	98	51.811	ENSMOCG00000015879	Tnrc6c	94	50.865	Microtus_ochrogaster
ENSACIG00000008075	tnrc6c1	93	76.823	ENSMMOG00000005203	tnrc6c1	100	76.562	Mola_mola
ENSACIG00000008075	tnrc6c1	79	53.095	ENSMODG00000001785	TNRC6C	93	46.489	Monodelphis_domestica
ENSACIG00000008075	tnrc6c1	98	51.811	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	50.865	Mus_caroli
ENSACIG00000008075	tnrc6c1	98	51.948	ENSMUSG00000025571	Tnrc6c	94	50.727	Mus_musculus
ENSACIG00000008075	tnrc6c1	98	51.880	MGP_PahariEiJ_G0018593	Tnrc6c	97	50.657	Mus_pahari
ENSACIG00000008075	tnrc6c1	98	51.675	MGP_SPRETEiJ_G0018309	Tnrc6c	94	50.796	Mus_spretus
ENSACIG00000008075	tnrc6c1	79	52.994	ENSMPUG00000013348	TNRC6C	87	52.309	Mustela_putorius_furo
ENSACIG00000008075	tnrc6c1	92	54.940	ENSMLUG00000014431	TNRC6C	72	50.584	Myotis_lucifugus
ENSACIG00000008075	tnrc6c1	98	51.503	ENSNGAG00000012203	Tnrc6c	90	50.034	Nannospalax_galili
ENSACIG00000008075	tnrc6c1	99	89.562	ENSNBRG00000005344	tnrc6c1	100	89.382	Neolamprologus_brichardi
ENSACIG00000008075	tnrc6c1	98	52.766	ENSNLEG00000000047	TNRC6C	93	46.361	Nomascus_leucogenys
ENSACIG00000008075	tnrc6c1	91	59.801	ENSMEUG00000005104	TNRC6C	89	55.667	Notamacropus_eugenii
ENSACIG00000008075	tnrc6c1	79	52.646	ENSODEG00000012499	TNRC6C	91	51.450	Octodon_degus
ENSACIG00000008075	tnrc6c1	93	83.364	ENSONIG00000002210	tnrc6c1	100	82.385	Oreochromis_niloticus
ENSACIG00000008075	tnrc6c1	67	56.419	ENSOANG00000009758	-	60	55.942	Ornithorhynchus_anatinus
ENSACIG00000008075	tnrc6c1	80	43.451	ENSOCUG00000006122	TNRC6C	84	45.611	Oryctolagus_cuniculus
ENSACIG00000008075	tnrc6c1	99	69.578	ENSORLG00000009837	tnrc6c1	100	78.676	Oryzias_latipes
ENSACIG00000008075	tnrc6c1	99	71.250	ENSORLG00020016510	tnrc6c1	100	70.741	Oryzias_latipes_hni
ENSACIG00000008075	tnrc6c1	77	67.104	ENSORLG00015000171	tnrc6c1	99	66.135	Oryzias_latipes_hsok
ENSACIG00000008075	tnrc6c1	99	72.361	ENSOMEG00000000357	tnrc6c1	100	71.396	Oryzias_melastigma
ENSACIG00000008075	tnrc6c1	90	49.045	ENSOGAG00000007197	TNRC6C	91	52.180	Otolemur_garnettii
ENSACIG00000008075	tnrc6c1	93	51.570	ENSOARG00000006041	TNRC6C	88	51.256	Ovis_aries
ENSACIG00000008075	tnrc6c1	98	54.235	ENSPPAG00000027160	TNRC6C	94	48.156	Pan_paniscus
ENSACIG00000008075	tnrc6c1	79	52.624	ENSPPRG00000018881	TNRC6C	91	51.920	Panthera_pardus
ENSACIG00000008075	tnrc6c1	98	41.110	ENSPTIG00000008791	TNRC6C	77	42.351	Panthera_tigris_altaica
ENSACIG00000008075	tnrc6c1	98	54.235	ENSPTRG00000009699	TNRC6C	94	48.210	Pan_troglodytes
ENSACIG00000008075	tnrc6c1	98	54.440	ENSPANG00000019994	TNRC6C	94	49.041	Papio_anubis
ENSACIG00000008075	tnrc6c1	93	56.201	ENSPKIG00000005428	tnrc6c1	100	56.022	Paramormyrops_kingsleyae
ENSACIG00000008075	tnrc6c1	96	53.559	ENSPSIG00000018069	TNRC6C	99	47.065	Pelodiscus_sinensis
ENSACIG00000008075	tnrc6c1	93	78.251	ENSPMGG00000022911	tnrc6c1	98	76.906	Periophthalmus_magnuspinnatus
ENSACIG00000008075	tnrc6c1	98	52.387	ENSPEMG00000009785	Tnrc6c	88	50.515	Peromyscus_maniculatus_bairdii
ENSACIG00000008075	tnrc6c1	99	76.093	ENSPFOG00000012560	tnrc6c1	99	79.104	Poecilia_formosa
ENSACIG00000008075	tnrc6c1	93	75.778	ENSPLAG00000021055	tnrc6c1	100	74.330	Poecilia_latipinna
ENSACIG00000008075	tnrc6c1	98	54.646	ENSPPYG00000008679	TNRC6C	92	48.470	Pongo_abelii
ENSACIG00000008075	tnrc6c1	83	62.500	ENSPCAG00000012510	TNRC6C	69	60.776	Procavia_capensis
ENSACIG00000008075	tnrc6c1	90	54.026	ENSPCOG00000021451	TNRC6C	94	49.671	Propithecus_coquereli
ENSACIG00000008075	tnrc6c1	86	66.102	ENSPVAG00000002008	TNRC6C	90	66.102	Pteropus_vampyrus
ENSACIG00000008075	tnrc6c1	100	88.436	ENSPNYG00000014477	tnrc6c1	100	88.436	Pundamilia_nyererei
ENSACIG00000008075	tnrc6c1	92	52.720	ENSRNOG00000022395	Tnrc6c	91	50.623	Rattus_norvegicus
ENSACIG00000008075	tnrc6c1	98	54.303	ENSRBIG00000027777	TNRC6C	94	50.240	Rhinopithecus_bieti
ENSACIG00000008075	tnrc6c1	98	54.303	ENSRROG00000042912	TNRC6C	94	50.240	Rhinopithecus_roxellana
ENSACIG00000008075	tnrc6c1	98	54.130	ENSSBOG00000023981	TNRC6C	91	53.103	Saimiri_boliviensis_boliviensis
ENSACIG00000008075	tnrc6c1	55	66.134	ENSSHAG00000018330	-	99	65.236	Sarcophilus_harrisii
ENSACIG00000008075	tnrc6c1	97	62.200	ENSSFOG00015004735	-	99	68.380	Scleropages_formosus
ENSACIG00000008075	tnrc6c1	99	73.458	ENSSMAG00000012761	tnrc6c1	99	74.385	Scophthalmus_maximus
ENSACIG00000008075	tnrc6c1	99	76.834	ENSSDUG00000002366	tnrc6c1	99	76.083	Seriola_dumerili
ENSACIG00000008075	tnrc6c1	93	75.812	ENSSLDG00000025613	tnrc6c1	100	75.135	Seriola_lalandi_dorsalis
ENSACIG00000008075	tnrc6c1	80	67.227	ENSSARG00000006816	TNRC6C	90	65.546	Sorex_araneus
ENSACIG00000008075	tnrc6c1	82	53.475	ENSSPUG00000007341	TNRC6C	92	52.223	Sphenodon_punctatus
ENSACIG00000008075	tnrc6c1	98	78.493	ENSSPAG00000014977	tnrc6c1	97	81.532	Stegastes_partitus
ENSACIG00000008075	tnrc6c1	90	67.757	ENSSSCG00000034373	TNRC6C	94	67.250	Sus_scrofa
ENSACIG00000008075	tnrc6c1	95	54.022	ENSTGUG00000007733	TNRC6C	99	47.852	Taeniopygia_guttata
ENSACIG00000008075	tnrc6c1	99	70.457	ENSTRUG00000011685	tnrc6c1	100	73.548	Takifugu_rubripes
ENSACIG00000008075	tnrc6c1	99	70.338	ENSTNIG00000005273	tnrc6c1	100	79.293	Tetraodon_nigroviridis
ENSACIG00000008075	tnrc6c1	65	49.028	ENSTBEG00000005046	TNRC6C	100	47.333	Tupaia_belangeri
ENSACIG00000008075	tnrc6c1	96	51.997	ENSTTRG00000010828	TNRC6C	99	47.239	Tursiops_truncatus
ENSACIG00000008075	tnrc6c1	98	52.063	ENSUMAG00000013614	TNRC6C	91	51.620	Ursus_maritimus
ENSACIG00000008075	tnrc6c1	53	49.788	ENSVPAG00000006765	-	95	50.559	Vicugna_pacos
ENSACIG00000008075	tnrc6c1	90	54.609	ENSVVUG00000015268	TNRC6C	91	53.217	Vulpes_vulpes
ENSACIG00000008075	tnrc6c1	91	48.120	ENSXETG00000019470	tnrc6c	92	47.767	Xenopus_tropicalis
ENSACIG00000008075	tnrc6c1	99	76.320	ENSXMAG00000025971	tnrc6c1	100	73.514	Xiphophorus_maculatus