EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000008091 (Gene tree)
Gene ID: -
Gene Symbol: srsf1a
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: serine/arginine-rich splicing factor 1a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2246 bases
Position: chrCCOE01000538.1:922771-925016
Accession: ZDB-GENE-040426-1950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000010344	RRM_1	PF00076.22	2.2e-32	1	2
ENSACIP00000010344	RRM_1	PF00076.22	2.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000010640	-	693	-	ENSACIP00000010344	230 (aa)	-	-

Gene Model

Click here to download ENSACIG00000008091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000008091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000008091	srsf1a	70	43.333	ENSACIG00000011892	srsf5a	96	38.129
ENSACIG00000008091	srsf1a	69	42.690	ENSACIG00000023658	-	63	39.904
ENSACIG00000008091	srsf1a	94	39.316	ENSACIG00000020091	-	94	38.168
ENSACIG00000008091	srsf1a	70	46.988	ENSACIG00000018649	srsf4	89	45.528
ENSACIG00000008091	srsf1a	68	43.094	ENSACIG00000010742	srsf5b	79	43.511
ENSACIG00000008091	srsf1a	77	87.293	ENSACIG00000002623	-	95	87.912
ENSACIG00000008091	srsf1a	77	68.182	ENSACIG00000015765	srsf9	70	71.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000008091	srsf1a	98	78.926	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSACIG00000008091	srsf1a	100	93.061	ENSAPOG00000002748	-	100	93.061	Acanthochromis_polyacanthus
ENSACIG00000008091	srsf1a	83	88.947	ENSAPOG00000008542	-	80	87.940	Acanthochromis_polyacanthus
ENSACIG00000008091	srsf1a	83	88.421	ENSAMEG00000002635	SRSF1	77	90.000	Ailuropoda_melanoleuca
ENSACIG00000008091	srsf1a	100	99.567	ENSAOCG00000010671	-	100	99.567	Amphiprion_ocellaris
ENSACIG00000008091	srsf1a	83	87.940	ENSAOCG00000000337	-	80	87.940	Amphiprion_ocellaris
ENSACIG00000008091	srsf1a	83	87.940	ENSAPEG00000023352	-	79	87.940	Amphiprion_percula
ENSACIG00000008091	srsf1a	100	99.567	ENSAPEG00000009915	-	100	99.567	Amphiprion_percula
ENSACIG00000008091	srsf1a	100	92.713	ENSATEG00000022403	-	100	92.713	Anabas_testudineus
ENSACIG00000008091	srsf1a	86	87.817	ENSATEG00000021567	-	92	84.163	Anabas_testudineus
ENSACIG00000008091	srsf1a	83	88.601	ENSACAG00000005542	-	78	90.674	Anolis_carolinensis
ENSACIG00000008091	srsf1a	98	78.926	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSACIG00000008091	srsf1a	84	66.839	ENSANAG00000025417	-	73	67.895	Aotus_nancymaae
ENSACIG00000008091	srsf1a	57	72.903	ENSAMXG00000024373	-	72	76.774	Astyanax_mexicanus
ENSACIG00000008091	srsf1a	83	86.364	ENSAMXG00000035996	srsf1a	79	88.384	Astyanax_mexicanus
ENSACIG00000008091	srsf1a	98	78.926	ENSBTAG00000014766	SRSF1	88	86.099	Bos_taurus
ENSACIG00000008091	srsf1a	98	78.926	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSACIG00000008091	srsf1a	83	82.383	ENSCJAG00000008111	-	86	83.420	Callithrix_jacchus
ENSACIG00000008091	srsf1a	98	78.926	ENSCAFG00000017430	SRSF1	88	86.099	Canis_familiaris
ENSACIG00000008091	srsf1a	98	78.926	ENSCAFG00020025632	-	88	86.099	Canis_lupus_dingo
ENSACIG00000008091	srsf1a	83	89.637	ENSCHIG00000010787	SRSF1	78	91.710	Capra_hircus
ENSACIG00000008091	srsf1a	98	78.926	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSACIG00000008091	srsf1a	98	78.926	ENSCPOG00000032681	-	88	86.099	Cavia_porcellus
ENSACIG00000008091	srsf1a	98	78.926	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSACIG00000008091	srsf1a	98	78.926	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSACIG00000008091	srsf1a	98	78.926	ENSCLAG00000014707	-	88	86.099	Chinchilla_lanigera
ENSACIG00000008091	srsf1a	98	78.099	ENSCSAG00000005642	-	88	85.202	Chlorocebus_sabaeus
ENSACIG00000008091	srsf1a	83	89.637	ENSCHOG00000001899	SRSF1	78	91.710	Choloepus_hoffmanni
ENSACIG00000008091	srsf1a	98	78.512	ENSCPBG00000009851	-	88	85.650	Chrysemys_picta_bellii
ENSACIG00000008091	srsf1a	98	78.926	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSACIG00000008091	srsf1a	98	78.926	ENSCGRG00001000670	Srsf1	88	86.099	Cricetulus_griseus_chok1gshd
ENSACIG00000008091	srsf1a	98	78.926	ENSCGRG00000005590	Srsf1	88	86.099	Cricetulus_griseus_crigri
ENSACIG00000008091	srsf1a	83	95.312	ENSCSEG00000014272	-	82	94.271	Cynoglossus_semilaevis
ENSACIG00000008091	srsf1a	82	81.731	ENSCSEG00000009973	-	79	81.731	Cynoglossus_semilaevis
ENSACIG00000008091	srsf1a	82	86.598	ENSCVAG00000005458	-	90	86.264	Cyprinodon_variegatus
ENSACIG00000008091	srsf1a	83	97.927	ENSCVAG00000018617	-	79	98.964	Cyprinodon_variegatus
ENSACIG00000008091	srsf1a	83	84.236	ENSDARG00000057691	srsf1a	99	85.340	Danio_rerio
ENSACIG00000008091	srsf1a	83	89.119	ENSDARG00000017843	srsf1b	79	91.710	Danio_rerio
ENSACIG00000008091	srsf1a	98	78.926	ENSDNOG00000011737	-	88	86.099	Dasypus_novemcinctus
ENSACIG00000008091	srsf1a	98	78.926	ENSDORG00000015082	Srsf1	88	86.099	Dipodomys_ordii
ENSACIG00000008091	srsf1a	77	88.889	ENSETEG00000005349	-	62	89.444	Echinops_telfairi
ENSACIG00000008091	srsf1a	98	78.926	ENSEASG00005002922	-	88	86.099	Equus_asinus_asinus
ENSACIG00000008091	srsf1a	83	89.637	ENSECAG00000016654	SRSF1	78	91.710	Equus_caballus
ENSACIG00000008091	srsf1a	77	90.000	ENSEEUG00000009255	-	62	90.556	Erinaceus_europaeus
ENSACIG00000008091	srsf1a	83	93.229	ENSELUG00000021646	srsf1a	76	93.229	Esox_lucius
ENSACIG00000008091	srsf1a	98	78.926	ENSFCAG00000002250	-	90	90.055	Felis_catus
ENSACIG00000008091	srsf1a	77	94.340	ENSFALG00000005062	-	93	66.949	Ficedula_albicollis
ENSACIG00000008091	srsf1a	98	78.926	ENSFDAG00000010646	-	88	86.099	Fukomys_damarensis
ENSACIG00000008091	srsf1a	100	98.701	ENSFHEG00000003174	srsf1a	100	98.701	Fundulus_heteroclitus
ENSACIG00000008091	srsf1a	85	89.744	ENSGMOG00000014787	-	80	88.947	Gadus_morhua
ENSACIG00000008091	srsf1a	83	89.119	ENSGALG00000005525	SRSF1	78	91.192	Gallus_gallus
ENSACIG00000008091	srsf1a	83	86.842	ENSGACG00000020621	srsf1b	78	86.316	Gasterosteus_aculeatus
ENSACIG00000008091	srsf1a	98	78.512	ENSGAGG00000022965	-	88	85.650	Gopherus_agassizii
ENSACIG00000008091	srsf1a	98	78.926	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSACIG00000008091	srsf1a	100	100.000	ENSHBUG00000016788	srsf1a	97	100.000	Haplochromis_burtoni
ENSACIG00000008091	srsf1a	70	89.024	ENSHGLG00000000669	-	76	91.463	Heterocephalus_glaber_female
ENSACIG00000008091	srsf1a	70	89.024	ENSHGLG00000000600	-	76	91.463	Heterocephalus_glaber_female
ENSACIG00000008091	srsf1a	98	78.926	ENSHGLG00100016906	-	88	86.099	Heterocephalus_glaber_male
ENSACIG00000008091	srsf1a	83	89.950	ENSHCOG00000018918	srsf1a	88	86.161	Hippocampus_comes
ENSACIG00000008091	srsf1a	83	86.070	ENSIPUG00000017039	srsf1a	80	88.060	Ictalurus_punctatus
ENSACIG00000008091	srsf1a	83	90.625	ENSIPUG00000008750	srsf1b	78	91.667	Ictalurus_punctatus
ENSACIG00000008091	srsf1a	98	78.926	ENSSTOG00000000243	-	91	90.055	Ictidomys_tridecemlineatus
ENSACIG00000008091	srsf1a	52	82.787	ENSJJAG00000014464	-	92	84.553	Jaculus_jaculus
ENSACIG00000008091	srsf1a	98	78.926	ENSJJAG00000000102	-	88	86.099	Jaculus_jaculus
ENSACIG00000008091	srsf1a	83	96.907	ENSKMAG00000019232	srsf1a	79	97.423	Kryptolebias_marmoratus
ENSACIG00000008091	srsf1a	83	79.592	ENSLBEG00000015294	-	79	81.122	Labrus_bergylta
ENSACIG00000008091	srsf1a	100	98.701	ENSLBEG00000020864	-	100	98.701	Labrus_bergylta
ENSACIG00000008091	srsf1a	83	88.542	ENSLACG00000014160	srsf1a	72	88.542	Latimeria_chalumnae
ENSACIG00000008091	srsf1a	83	89.583	ENSLOCG00000005994	srsf1a	78	91.667	Lepisosteus_oculatus
ENSACIG00000008091	srsf1a	83	89.637	ENSLAFG00000025743	SRSF1	78	91.710	Loxodonta_africana
ENSACIG00000008091	srsf1a	98	78.926	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSACIG00000008091	srsf1a	98	78.926	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSACIG00000008091	srsf1a	99	75.720	ENSMMUG00000003260	-	93	89.062	Macaca_mulatta
ENSACIG00000008091	srsf1a	98	78.926	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSACIG00000008091	srsf1a	99	76.132	ENSMNEG00000015983	-	88	83.857	Macaca_nemestrina
ENSACIG00000008091	srsf1a	83	89.637	ENSMLEG00000040509	SRSF1	78	91.710	Mandrillus_leucophaeus
ENSACIG00000008091	srsf1a	98	76.987	ENSMLEG00000015243	-	88	82.273	Mandrillus_leucophaeus
ENSACIG00000008091	srsf1a	83	90.526	ENSMAMG00000019687	-	91	86.036	Mastacembelus_armatus
ENSACIG00000008091	srsf1a	100	93.469	ENSMAMG00000018454	-	100	93.469	Mastacembelus_armatus
ENSACIG00000008091	srsf1a	83	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSACIG00000008091	srsf1a	98	78.926	ENSMAUG00000021845	Srsf1	88	86.099	Mesocricetus_auratus
ENSACIG00000008091	srsf1a	98	78.926	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSACIG00000008091	srsf1a	98	78.926	ENSMOCG00000001996	Srsf1	88	86.099	Microtus_ochrogaster
ENSACIG00000008091	srsf1a	100	98.701	ENSMMOG00000014354	srsf1a	100	98.701	Mola_mola
ENSACIG00000008091	srsf1a	77	91.160	ENSMODG00000014781	-	62	92.265	Monodelphis_domestica
ENSACIG00000008091	srsf1a	97	72.807	ENSMALG00000007763	-	77	82.632	Monopterus_albus
ENSACIG00000008091	srsf1a	83	97.927	ENSMALG00000017129	-	76	98.446	Monopterus_albus
ENSACIG00000008091	srsf1a	98	78.926	MGP_CAROLIEiJ_G0016943	Srsf1	90	90.055	Mus_caroli
ENSACIG00000008091	srsf1a	98	78.926	ENSMUSG00000018379	Srsf1	90	90.055	Mus_musculus
ENSACIG00000008091	srsf1a	98	78.926	MGP_PahariEiJ_G0018074	Srsf1	88	86.099	Mus_pahari
ENSACIG00000008091	srsf1a	98	78.926	MGP_SPRETEiJ_G0017790	Srsf1	90	90.055	Mus_spretus
ENSACIG00000008091	srsf1a	83	89.637	ENSMPUG00000015369	SRSF1	78	91.710	Mustela_putorius_furo
ENSACIG00000008091	srsf1a	83	89.637	ENSMLUG00000011040	SRSF1	78	91.710	Myotis_lucifugus
ENSACIG00000008091	srsf1a	85	87.755	ENSMLUG00000023995	-	77	87.895	Myotis_lucifugus
ENSACIG00000008091	srsf1a	83	89.637	ENSNGAG00000011395	Srsf1	78	91.710	Nannospalax_galili
ENSACIG00000008091	srsf1a	99	72.385	ENSNBRG00000008041	srsf1b	78	77.895	Neolamprologus_brichardi
ENSACIG00000008091	srsf1a	98	78.926	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSACIG00000008091	srsf1a	52	87.805	ENSMEUG00000002783	-	98	88.710	Notamacropus_eugenii
ENSACIG00000008091	srsf1a	56	87.879	ENSOPRG00000001234	-	72	90.909	Ochotona_princeps
ENSACIG00000008091	srsf1a	98	78.926	ENSODEG00000011481	-	88	86.099	Octodon_degus
ENSACIG00000008091	srsf1a	100	93.852	ENSONIG00000013160	-	99	93.852	Oreochromis_niloticus
ENSACIG00000008091	srsf1a	84	91.282	ENSONIG00000004860	-	79	90.625	Oreochromis_niloticus
ENSACIG00000008091	srsf1a	86	72.081	ENSOCUG00000010894	-	75	72.872	Oryctolagus_cuniculus
ENSACIG00000008091	srsf1a	100	93.469	ENSORLG00000004580	srsf1a	100	93.469	Oryzias_latipes
ENSACIG00000008091	srsf1a	100	99.567	ENSORLG00020009456	srsf1a	100	99.567	Oryzias_latipes_hni
ENSACIG00000008091	srsf1a	100	99.567	ENSORLG00015014384	srsf1a	100	99.567	Oryzias_latipes_hsok
ENSACIG00000008091	srsf1a	92	91.593	ENSOMEG00000004106	srsf1a	93	91.593	Oryzias_melastigma
ENSACIG00000008091	srsf1a	87	90.196	ENSOGAG00000025950	-	78	91.710	Otolemur_garnettii
ENSACIG00000008091	srsf1a	83	89.474	ENSOARG00000008323	SRSF1	77	89.474	Ovis_aries
ENSACIG00000008091	srsf1a	98	78.926	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSACIG00000008091	srsf1a	98	78.926	ENSPPRG00000004238	-	90	90.055	Panthera_pardus
ENSACIG00000008091	srsf1a	98	78.926	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSACIG00000008091	srsf1a	99	63.071	ENSPANG00000030275	-	89	65.179	Papio_anubis
ENSACIG00000008091	srsf1a	98	78.926	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSACIG00000008091	srsf1a	83	88.542	ENSPKIG00000007204	srsf1a	83	90.625	Paramormyrops_kingsleyae
ENSACIG00000008091	srsf1a	83	89.583	ENSPKIG00000012857	srsf1b	78	91.667	Paramormyrops_kingsleyae
ENSACIG00000008091	srsf1a	83	81.865	ENSPSIG00000009000	-	72	90.226	Pelodiscus_sinensis
ENSACIG00000008091	srsf1a	85	88.205	ENSPMGG00000005467	-	97	78.059	Periophthalmus_magnuspinnatus
ENSACIG00000008091	srsf1a	100	96.087	ENSPMGG00000013112	-	100	96.087	Periophthalmus_magnuspinnatus
ENSACIG00000008091	srsf1a	98	78.926	ENSPEMG00000021416	Srsf1	88	86.099	Peromyscus_maniculatus_bairdii
ENSACIG00000008091	srsf1a	83	90.206	ENSPCIG00000006076	-	78	91.753	Phascolarctos_cinereus
ENSACIG00000008091	srsf1a	84	86.802	ENSPFOG00000018325	-	69	87.047	Poecilia_formosa
ENSACIG00000008091	srsf1a	84	86.802	ENSPLAG00000008416	srsf1b	78	87.047	Poecilia_latipinna
ENSACIG00000008091	srsf1a	53	98.374	ENSPMEG00000020607	-	99	98.374	Poecilia_mexicana
ENSACIG00000008091	srsf1a	84	86.802	ENSPMEG00000002388	-	78	87.047	Poecilia_mexicana
ENSACIG00000008091	srsf1a	53	98.374	ENSPMEG00000014312	-	99	98.374	Poecilia_mexicana
ENSACIG00000008091	srsf1a	83	97.927	ENSPREG00000009667	srsf1a	79	98.964	Poecilia_reticulata
ENSACIG00000008091	srsf1a	98	78.926	ENSPPYG00000008240	SRSF1	88	86.099	Pongo_abelii
ENSACIG00000008091	srsf1a	83	89.637	ENSPCAG00000005199	SRSF1	78	91.710	Procavia_capensis
ENSACIG00000008091	srsf1a	98	78.926	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSACIG00000008091	srsf1a	83	73.232	ENSPCOG00000025736	-	93	73.684	Propithecus_coquereli
ENSACIG00000008091	srsf1a	57	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSACIG00000008091	srsf1a	83	92.105	ENSPNAG00000014601	srsf1b	78	91.579	Pygocentrus_nattereri
ENSACIG00000008091	srsf1a	83	91.053	ENSPNAG00000022241	srsf1a	78	91.053	Pygocentrus_nattereri
ENSACIG00000008091	srsf1a	83	89.637	ENSRNOG00000050323	Srsf1	78	91.710	Rattus_norvegicus
ENSACIG00000008091	srsf1a	98	78.926	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSACIG00000008091	srsf1a	98	78.926	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSACIG00000008091	srsf1a	98	78.926	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSACIG00000008091	srsf1a	83	90.206	ENSSHAG00000002552	-	78	91.753	Sarcophilus_harrisii
ENSACIG00000008091	srsf1a	83	91.623	ENSSFOG00015004800	srsf1a	77	92.147	Scleropages_formosus
ENSACIG00000008091	srsf1a	100	92.245	ENSSMAG00000007018	-	100	92.245	Scophthalmus_maximus
ENSACIG00000008091	srsf1a	83	85.000	ENSSMAG00000009719	-	78	85.000	Scophthalmus_maximus
ENSACIG00000008091	srsf1a	100	98.701	ENSSDUG00000011303	-	100	98.701	Seriola_dumerili
ENSACIG00000008091	srsf1a	99	76.068	ENSSDUG00000003929	-	83	79.293	Seriola_dumerili
ENSACIG00000008091	srsf1a	100	92.653	ENSSLDG00000010543	-	100	92.653	Seriola_lalandi_dorsalis
ENSACIG00000008091	srsf1a	98	71.053	ENSSLDG00000016895	-	77	83.152	Seriola_lalandi_dorsalis
ENSACIG00000008091	srsf1a	83	81.579	ENSSLDG00000016868	-	89	76.471	Seriola_lalandi_dorsalis
ENSACIG00000008091	srsf1a	77	90.000	ENSSARG00000010949	-	62	90.556	Sorex_araneus
ENSACIG00000008091	srsf1a	98	78.512	ENSSPUG00000000804	-	91	89.503	Sphenodon_punctatus
ENSACIG00000008091	srsf1a	83	84.466	ENSSPAG00000014152	-	80	84.466	Stegastes_partitus
ENSACIG00000008091	srsf1a	100	93.089	ENSSPAG00000022562	-	100	93.089	Stegastes_partitus
ENSACIG00000008091	srsf1a	98	78.926	ENSSSCG00000017626	-	88	86.099	Sus_scrofa
ENSACIG00000008091	srsf1a	57	87.218	ENSTGUG00000008416	-	72	90.226	Taeniopygia_guttata
ENSACIG00000008091	srsf1a	100	92.653	ENSTRUG00000003691	srsf1a	100	92.653	Takifugu_rubripes
ENSACIG00000008091	srsf1a	100	92.653	ENSTNIG00000016223	srsf1a	99	92.653	Tetraodon_nigroviridis
ENSACIG00000008091	srsf1a	77	87.778	ENSTBEG00000015378	-	62	90.556	Tupaia_belangeri
ENSACIG00000008091	srsf1a	56	87.879	ENSTTRG00000007310	SRSF1	72	90.909	Tursiops_truncatus
ENSACIG00000008091	srsf1a	83	89.637	ENSUAMG00000009858	SRSF1	78	91.710	Ursus_americanus
ENSACIG00000008091	srsf1a	98	78.926	ENSUMAG00000000455	-	88	86.099	Ursus_maritimus
ENSACIG00000008091	srsf1a	83	89.119	ENSVPAG00000010094	SRSF1	78	91.192	Vicugna_pacos
ENSACIG00000008091	srsf1a	98	78.926	ENSVVUG00000011882	-	88	86.099	Vulpes_vulpes
ENSACIG00000008091	srsf1a	83	92.632	ENSXETG00000008954	srsf1	79	83.962	Xenopus_tropicalis
ENSACIG00000008091	srsf1a	83	97.927	ENSXMAG00000011766	srsf1a	79	98.964	Xiphophorus_maculatus