EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000008538 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog b
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 8373 bases
Position: chrCCOE01001468.1:252278-260650
Accession: ZDB-GENE-040426-2164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000010901	AD	PF09793.9	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000011218	-	591	-	ENSACIP00000010901	196 (aa)	-	-

Gene Model

Click here to download ENSACIG00000008538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000008538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000008538	lsm12b	100	84.184	ENSG00000161654	LSM12	100	84.184	Homo_sapiens
ENSACIG00000008538	lsm12b	100	97.449	ENSAPOG00000007907	lsm12b	100	97.449	Acanthochromis_polyacanthus
ENSACIG00000008538	lsm12b	100	82.412	ENSAMEG00000018321	LSM12	100	82.412	Ailuropoda_melanoleuca
ENSACIG00000008538	lsm12b	100	97.959	ENSAOCG00000021847	lsm12b	88	97.959	Amphiprion_ocellaris
ENSACIG00000008538	lsm12b	100	97.959	ENSAPEG00000002252	lsm12b	100	97.959	Amphiprion_percula
ENSACIG00000008538	lsm12b	100	96.429	ENSATEG00000005705	lsm12b	100	96.429	Anabas_testudineus
ENSACIG00000008538	lsm12b	100	83.163	ENSACAG00000004618	LSM12	100	83.163	Anolis_carolinensis
ENSACIG00000008538	lsm12b	100	84.184	ENSANAG00000029011	LSM12	100	84.184	Aotus_nancymaae
ENSACIG00000008538	lsm12b	100	99.490	ENSACLG00000026332	lsm12b	100	99.490	Astatotilapia_calliptera
ENSACIG00000008538	lsm12b	100	85.204	ENSAMXG00000036117	lsm12a	91	85.204	Astyanax_mexicanus
ENSACIG00000008538	lsm12b	100	92.347	ENSAMXG00000032952	lsm12b	100	92.347	Astyanax_mexicanus
ENSACIG00000008538	lsm12b	100	84.184	ENSBTAG00000016252	LSM12	100	84.184	Bos_taurus
ENSACIG00000008538	lsm12b	100	84.184	ENSCJAG00000048480	LSM12	100	84.184	Callithrix_jacchus
ENSACIG00000008538	lsm12b	100	84.184	ENSCAFG00000014379	LSM12	92	84.184	Canis_familiaris
ENSACIG00000008538	lsm12b	100	84.184	ENSCAFG00020012173	LSM12	100	84.184	Canis_lupus_dingo
ENSACIG00000008538	lsm12b	100	84.184	ENSCHIG00000018175	LSM12	100	84.184	Capra_hircus
ENSACIG00000008538	lsm12b	100	84.184	ENSTSYG00000036361	LSM12	100	84.184	Carlito_syrichta
ENSACIG00000008538	lsm12b	83	80.247	ENSCAPG00000009647	LSM12	89	80.247	Cavia_aperea
ENSACIG00000008538	lsm12b	100	83.163	ENSCPOG00000012860	LSM12	100	83.163	Cavia_porcellus
ENSACIG00000008538	lsm12b	100	84.184	ENSCCAG00000032905	LSM12	100	84.184	Cebus_capucinus
ENSACIG00000008538	lsm12b	100	84.184	ENSCATG00000030577	-	100	84.184	Cercocebus_atys
ENSACIG00000008538	lsm12b	100	83.673	ENSCLAG00000015759	LSM12	100	83.673	Chinchilla_lanigera
ENSACIG00000008538	lsm12b	100	84.694	ENSCSAG00000003486	LSM12	100	84.694	Chlorocebus_sabaeus
ENSACIG00000008538	lsm12b	56	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSACIG00000008538	lsm12b	100	84.694	ENSCPBG00000027105	LSM12	100	84.694	Chrysemys_picta_bellii
ENSACIG00000008538	lsm12b	100	84.184	ENSCANG00000043328	LSM12	100	84.184	Colobus_angolensis_palliatus
ENSACIG00000008538	lsm12b	100	84.184	ENSCGRG00001002094	Lsm12	100	84.184	Cricetulus_griseus_chok1gshd
ENSACIG00000008538	lsm12b	89	76.437	ENSCGRG00000004316	Lsm12	98	76.437	Cricetulus_griseus_crigri
ENSACIG00000008538	lsm12b	100	96.939	ENSCSEG00000008434	lsm12b	100	96.939	Cynoglossus_semilaevis
ENSACIG00000008538	lsm12b	100	95.918	ENSCVAG00000008755	lsm12b	100	95.918	Cyprinodon_variegatus
ENSACIG00000008538	lsm12b	100	93.367	ENSDARG00000109510	lsm12b	100	93.367	Danio_rerio
ENSACIG00000008538	lsm12b	100	85.204	ENSDARG00000028848	lsm12a	100	85.204	Danio_rerio
ENSACIG00000008538	lsm12b	100	84.184	ENSDNOG00000002418	LSM12	91	84.184	Dasypus_novemcinctus
ENSACIG00000008538	lsm12b	100	84.184	ENSDORG00000016381	Lsm12	100	84.184	Dipodomys_ordii
ENSACIG00000008538	lsm12b	83	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSACIG00000008538	lsm12b	73	32.278	FBgn0036057	CG14164	83	32.278	Drosophila_melanogaster
ENSACIG00000008538	lsm12b	88	75.145	ENSETEG00000011012	-	99	75.145	Echinops_telfairi
ENSACIG00000008538	lsm12b	100	83.673	ENSETEG00000008374	LSM12	100	83.673	Echinops_telfairi
ENSACIG00000008538	lsm12b	85	65.868	ENSEBUG00000016299	lsm12a	92	65.868	Eptatretus_burgeri
ENSACIG00000008538	lsm12b	100	84.184	ENSEASG00005010155	LSM12	100	84.184	Equus_asinus_asinus
ENSACIG00000008538	lsm12b	100	84.184	ENSECAG00000009071	LSM12	100	84.184	Equus_caballus
ENSACIG00000008538	lsm12b	78	84.314	ENSEEUG00000002419	-	100	84.314	Erinaceus_europaeus
ENSACIG00000008538	lsm12b	100	90.816	ENSELUG00000000256	-	100	90.816	Esox_lucius
ENSACIG00000008538	lsm12b	100	93.367	ENSELUG00000015538	lsm12b	100	88.776	Esox_lucius
ENSACIG00000008538	lsm12b	100	84.184	ENSFCAG00000037021	LSM12	100	84.184	Felis_catus
ENSACIG00000008538	lsm12b	80	80.769	ENSFDAG00000008954	LSM12	91	80.769	Fukomys_damarensis
ENSACIG00000008538	lsm12b	100	95.918	ENSFHEG00000019913	lsm12b	100	95.918	Fundulus_heteroclitus
ENSACIG00000008538	lsm12b	81	97.468	ENSGMOG00000015449	lsm12b	100	97.468	Gadus_morhua
ENSACIG00000008538	lsm12b	78	84.967	ENSGALG00000039803	LSM12	100	84.967	Gallus_gallus
ENSACIG00000008538	lsm12b	100	95.918	ENSGAFG00000011829	lsm12b	100	95.918	Gambusia_affinis
ENSACIG00000008538	lsm12b	81	98.101	ENSGACG00000003428	lsm12b	100	98.101	Gasterosteus_aculeatus
ENSACIG00000008538	lsm12b	100	83.673	ENSGAGG00000021965	LSM12	100	83.673	Gopherus_agassizii
ENSACIG00000008538	lsm12b	100	84.184	ENSGGOG00000010589	-	100	84.184	Gorilla_gorilla
ENSACIG00000008538	lsm12b	85	99.401	ENSHBUG00000007667	lsm12b	74	99.401	Haplochromis_burtoni
ENSACIG00000008538	lsm12b	100	84.184	ENSHGLG00000011411	LSM12	100	84.184	Heterocephalus_glaber_female
ENSACIG00000008538	lsm12b	79	83.766	ENSHGLG00100000241	LSM12	82	83.766	Heterocephalus_glaber_male
ENSACIG00000008538	lsm12b	100	93.878	ENSHCOG00000002094	lsm12b	100	93.878	Hippocampus_comes
ENSACIG00000008538	lsm12b	100	92.857	ENSIPUG00000014800	lsm12	100	92.857	Ictalurus_punctatus
ENSACIG00000008538	lsm12b	99	82.990	ENSIPUG00000008936	lsm12a	99	82.990	Ictalurus_punctatus
ENSACIG00000008538	lsm12b	100	84.184	ENSSTOG00000007403	LSM12	100	84.184	Ictidomys_tridecemlineatus
ENSACIG00000008538	lsm12b	76	74.497	ENSJJAG00000014652	-	89	74.497	Jaculus_jaculus
ENSACIG00000008538	lsm12b	96	75.263	ENSJJAG00000011793	-	100	75.263	Jaculus_jaculus
ENSACIG00000008538	lsm12b	100	83.163	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSACIG00000008538	lsm12b	85	95.210	ENSKMAG00000007704	lsm12b	56	95.210	Kryptolebias_marmoratus
ENSACIG00000008538	lsm12b	100	97.449	ENSLBEG00000027999	lsm12b	100	97.449	Labrus_bergylta
ENSACIG00000008538	lsm12b	100	87.245	ENSLACG00000015981	LSM12	100	87.245	Latimeria_chalumnae
ENSACIG00000008538	lsm12b	100	91.837	ENSLOCG00000013079	lsm12b	99	91.837	Lepisosteus_oculatus
ENSACIG00000008538	lsm12b	100	84.184	ENSLAFG00000005202	LSM12	100	84.184	Loxodonta_africana
ENSACIG00000008538	lsm12b	100	84.184	ENSMFAG00000031376	LSM12	100	84.184	Macaca_fascicularis
ENSACIG00000008538	lsm12b	65	73.563	ENSMMUG00000042106	-	100	73.563	Macaca_mulatta
ENSACIG00000008538	lsm12b	100	84.184	ENSMMUG00000006804	LSM12	100	84.184	Macaca_mulatta
ENSACIG00000008538	lsm12b	100	84.184	ENSMNEG00000030594	-	100	84.184	Macaca_nemestrina
ENSACIG00000008538	lsm12b	100	84.184	ENSMLEG00000039934	LSM12	100	84.184	Mandrillus_leucophaeus
ENSACIG00000008538	lsm12b	100	97.449	ENSMAMG00000004279	lsm12b	100	97.449	Mastacembelus_armatus
ENSACIG00000008538	lsm12b	100	99.490	ENSMZEG00005005754	lsm12b	100	99.490	Maylandia_zebra
ENSACIG00000008538	lsm12b	100	84.694	ENSMICG00000037219	LSM12	100	84.694	Microcebus_murinus
ENSACIG00000008538	lsm12b	100	84.184	ENSMOCG00000019878	-	100	84.184	Microtus_ochrogaster
ENSACIG00000008538	lsm12b	100	71.939	ENSMOCG00000017015	-	86	71.939	Microtus_ochrogaster
ENSACIG00000008538	lsm12b	100	97.449	ENSMMOG00000020848	lsm12b	100	97.449	Mola_mola
ENSACIG00000008538	lsm12b	100	97.449	ENSMALG00000007578	lsm12b	100	97.449	Monopterus_albus
ENSACIG00000008538	lsm12b	100	83.673	MGP_CAROLIEiJ_G0017241	Lsm12	100	83.673	Mus_caroli
ENSACIG00000008538	lsm12b	100	84.184	ENSMUSG00000020922	Lsm12	100	84.184	Mus_musculus
ENSACIG00000008538	lsm12b	100	77.465	MGP_PahariEiJ_G0018371	Lsm12	100	77.465	Mus_pahari
ENSACIG00000008538	lsm12b	100	83.673	MGP_SPRETEiJ_G0018084	Lsm12	100	83.673	Mus_spretus
ENSACIG00000008538	lsm12b	100	84.694	ENSMLUG00000006391	LSM12	100	84.694	Myotis_lucifugus
ENSACIG00000008538	lsm12b	100	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSACIG00000008538	lsm12b	100	84.184	ENSNGAG00000001870	Lsm12	100	84.184	Nannospalax_galili
ENSACIG00000008538	lsm12b	100	99.490	ENSNBRG00000006266	lsm12b	100	99.490	Neolamprologus_brichardi
ENSACIG00000008538	lsm12b	100	84.184	ENSNLEG00000005580	-	100	84.184	Nomascus_leucogenys
ENSACIG00000008538	lsm12b	85	84.940	ENSMEUG00000007501	-	100	84.940	Notamacropus_eugenii
ENSACIG00000008538	lsm12b	100	84.184	ENSOPRG00000008552	LSM12	100	84.184	Ochotona_princeps
ENSACIG00000008538	lsm12b	99	84.021	ENSODEG00000017998	-	99	84.021	Octodon_degus
ENSACIG00000008538	lsm12b	100	76.531	ENSODEG00000007886	-	74	76.531	Octodon_degus
ENSACIG00000008538	lsm12b	100	99.490	ENSONIG00000007933	lsm12b	100	99.490	Oreochromis_niloticus
ENSACIG00000008538	lsm12b	99	77.949	ENSOCUG00000024823	-	100	77.949	Oryctolagus_cuniculus
ENSACIG00000008538	lsm12b	99	78.974	ENSOCUG00000021254	-	100	78.974	Oryctolagus_cuniculus
ENSACIG00000008538	lsm12b	100	82.412	ENSOCUG00000008566	-	100	82.412	Oryctolagus_cuniculus
ENSACIG00000008538	lsm12b	99	78.974	ENSOCUG00000027889	-	100	78.974	Oryctolagus_cuniculus
ENSACIG00000008538	lsm12b	100	96.939	ENSORLG00000011310	lsm12b	100	96.939	Oryzias_latipes
ENSACIG00000008538	lsm12b	100	96.939	ENSORLG00020002060	lsm12b	92	96.939	Oryzias_latipes_hni
ENSACIG00000008538	lsm12b	100	96.939	ENSORLG00015001647	lsm12b	92	96.939	Oryzias_latipes_hsok
ENSACIG00000008538	lsm12b	100	96.939	ENSOMEG00000006184	lsm12b	92	96.939	Oryzias_melastigma
ENSACIG00000008538	lsm12b	100	84.694	ENSOGAG00000010489	LSM12	100	84.694	Otolemur_garnettii
ENSACIG00000008538	lsm12b	100	81.188	ENSOARG00000006589	LSM12	100	81.188	Ovis_aries
ENSACIG00000008538	lsm12b	100	74.490	ENSPPAG00000034974	-	100	74.490	Pan_paniscus
ENSACIG00000008538	lsm12b	100	84.184	ENSPPRG00000023420	LSM12	100	84.184	Panthera_pardus
ENSACIG00000008538	lsm12b	78	84.314	ENSPTIG00000012704	-	82	84.314	Panthera_tigris_altaica
ENSACIG00000008538	lsm12b	72	83.636	ENSPTIG00000014850	-	100	83.636	Panthera_tigris_altaica
ENSACIG00000008538	lsm12b	100	84.184	ENSPTRG00000009261	LSM12	100	84.184	Pan_troglodytes
ENSACIG00000008538	lsm12b	100	84.184	ENSPANG00000021315	-	100	84.184	Papio_anubis
ENSACIG00000008538	lsm12b	100	91.837	ENSPKIG00000021058	lsm12b	100	91.837	Paramormyrops_kingsleyae
ENSACIG00000008538	lsm12b	100	82.653	ENSPKIG00000017932	-	100	82.653	Paramormyrops_kingsleyae
ENSACIG00000008538	lsm12b	100	96.429	ENSPMGG00000021344	lsm12b	100	96.429	Periophthalmus_magnuspinnatus
ENSACIG00000008538	lsm12b	100	84.184	ENSPEMG00000012199	Lsm12	100	84.184	Peromyscus_maniculatus_bairdii
ENSACIG00000008538	lsm12b	89	68.571	ENSPMAG00000005461	lsm12a	99	68.571	Petromyzon_marinus
ENSACIG00000008538	lsm12b	100	85.204	ENSPCIG00000020244	LSM12	100	85.204	Phascolarctos_cinereus
ENSACIG00000008538	lsm12b	100	94.898	ENSPFOG00000015930	lsm12b	100	94.898	Poecilia_formosa
ENSACIG00000008538	lsm12b	100	94.898	ENSPLAG00000021089	lsm12b	100	94.898	Poecilia_latipinna
ENSACIG00000008538	lsm12b	100	94.898	ENSPMEG00000012961	lsm12b	100	94.898	Poecilia_mexicana
ENSACIG00000008538	lsm12b	87	97.076	ENSPREG00000010236	lsm12b	95	97.076	Poecilia_reticulata
ENSACIG00000008538	lsm12b	100	84.184	ENSPPYG00000008344	LSM12	100	84.184	Pongo_abelii
ENSACIG00000008538	lsm12b	81	84.277	ENSPCAG00000008790	LSM12	100	84.277	Procavia_capensis
ENSACIG00000008538	lsm12b	100	84.184	ENSPCOG00000027951	LSM12	100	84.184	Propithecus_coquereli
ENSACIG00000008538	lsm12b	100	84.694	ENSPVAG00000013706	LSM12	100	84.694	Pteropus_vampyrus
ENSACIG00000008538	lsm12b	100	99.490	ENSPNYG00000003386	lsm12b	100	99.490	Pundamilia_nyererei
ENSACIG00000008538	lsm12b	100	92.857	ENSPNAG00000004186	lsm12b	100	92.857	Pygocentrus_nattereri
ENSACIG00000008538	lsm12b	100	83.673	ENSPNAG00000018435	lsm12a	100	83.673	Pygocentrus_nattereri
ENSACIG00000008538	lsm12b	100	84.184	ENSRNOG00000020894	Lsm12	100	84.184	Rattus_norvegicus
ENSACIG00000008538	lsm12b	100	84.184	ENSRBIG00000027910	LSM12	100	84.184	Rhinopithecus_bieti
ENSACIG00000008538	lsm12b	99	52.577	ENSRROG00000000537	-	99	52.577	Rhinopithecus_roxellana
ENSACIG00000008538	lsm12b	100	84.184	ENSRROG00000045530	-	100	84.184	Rhinopithecus_roxellana
ENSACIG00000008538	lsm12b	100	84.184	ENSSBOG00000025310	LSM12	100	84.184	Saimiri_boliviensis_boliviensis
ENSACIG00000008538	lsm12b	81	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSACIG00000008538	lsm12b	100	94.388	ENSSFOG00015009612	lsm12	100	94.388	Scleropages_formosus
ENSACIG00000008538	lsm12b	100	92.347	ENSSFOG00015020392	lsm12a	100	92.347	Scleropages_formosus
ENSACIG00000008538	lsm12b	100	97.449	ENSSMAG00000008089	lsm12b	100	97.449	Scophthalmus_maximus
ENSACIG00000008538	lsm12b	100	97.449	ENSSDUG00000012711	lsm12b	100	97.449	Seriola_dumerili
ENSACIG00000008538	lsm12b	100	97.449	ENSSLDG00000007404	lsm12b	100	97.449	Seriola_lalandi_dorsalis
ENSACIG00000008538	lsm12b	78	83.660	ENSSARG00000005537	LSM12	100	83.660	Sorex_araneus
ENSACIG00000008538	lsm12b	100	84.694	ENSSPUG00000011984	LSM12	100	84.694	Sphenodon_punctatus
ENSACIG00000008538	lsm12b	100	97.959	ENSSPAG00000017058	lsm12b	100	97.959	Stegastes_partitus
ENSACIG00000008538	lsm12b	100	84.184	ENSSSCG00000032394	LSM12	100	84.184	Sus_scrofa
ENSACIG00000008538	lsm12b	100	96.429	ENSTRUG00000007121	lsm12b	100	96.429	Takifugu_rubripes
ENSACIG00000008538	lsm12b	100	96.429	ENSTNIG00000014436	lsm12b	100	96.429	Tetraodon_nigroviridis
ENSACIG00000008538	lsm12b	100	83.673	ENSTBEG00000012523	-	100	83.673	Tupaia_belangeri
ENSACIG00000008538	lsm12b	100	81.633	ENSTBEG00000012392	-	100	81.633	Tupaia_belangeri
ENSACIG00000008538	lsm12b	100	84.184	ENSTTRG00000010433	LSM12	100	84.184	Tursiops_truncatus
ENSACIG00000008538	lsm12b	100	84.184	ENSUAMG00000006313	LSM12	100	84.184	Ursus_americanus
ENSACIG00000008538	lsm12b	81	81.646	ENSUMAG00000012987	LSM12	90	81.646	Ursus_maritimus
ENSACIG00000008538	lsm12b	100	79.592	ENSVPAG00000011145	LSM12	100	79.592	Vicugna_pacos
ENSACIG00000008538	lsm12b	100	84.184	ENSVVUG00000017581	LSM12	100	84.184	Vulpes_vulpes
ENSACIG00000008538	lsm12b	82	60.000	ENSXETG00000003371	lsm12	77	60.000	Xenopus_tropicalis
ENSACIG00000008538	lsm12b	100	95.918	ENSXCOG00000003994	lsm12b	100	95.918	Xiphophorus_couchianus
ENSACIG00000008538	lsm12b	100	95.918	ENSXMAG00000020950	lsm12b	100	95.918	Xiphophorus_maculatus