EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000008632 (Gene tree)
Gene ID: -
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 13117 bases
Position: chrCCOE01000581.1:45305-58421
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000011056	DND1_DSRM	PF14709.7	6.4e-27	1	1
ENSACIP00000011056	RRM_1	PF00076.22	5.5e-42	1	3
ENSACIP00000011056	RRM_1	PF00076.22	5.5e-42	2	3
ENSACIP00000011056	RRM_1	PF00076.22	5.5e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000011375	-	1815	-	ENSACIP00000011056	604 (aa)	-	-

Gene Model

Click here to download ENSACIG00000008632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000008632's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000008632	a1cf	85	62.752	ENSACIG00000014500	rbm46	85	62.752
ENSACIG00000008632	a1cf	88	52.612	ENSACIG00000011531	rbm47	80	51.020

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000008632	a1cf	100	77.355	ENSG00000148584	A1CF	100	88.119	Homo_sapiens
ENSACIG00000008632	a1cf	100	83.361	ENSAPOG00000008259	a1cf	100	83.526	Acanthochromis_polyacanthus
ENSACIG00000008632	a1cf	100	75.856	ENSAMEG00000000523	A1CF	100	75.204	Ailuropoda_melanoleuca
ENSACIG00000008632	a1cf	100	86.656	ENSAOCG00000023744	a1cf	93	93.433	Amphiprion_ocellaris
ENSACIG00000008632	a1cf	100	84.553	ENSAPEG00000009537	a1cf	100	84.553	Amphiprion_percula
ENSACIG00000008632	a1cf	100	89.951	ENSATEG00000013720	a1cf	100	88.962	Anabas_testudineus
ENSACIG00000008632	a1cf	100	76.672	ENSAPLG00000002964	A1CF	100	75.204	Anas_platyrhynchos
ENSACIG00000008632	a1cf	100	76.860	ENSACAG00000015269	A1CF	100	75.868	Anolis_carolinensis
ENSACIG00000008632	a1cf	100	78.017	ENSANAG00000019974	A1CF	100	76.694	Aotus_nancymaae
ENSACIG00000008632	a1cf	100	92.053	ENSACLG00000017428	a1cf	100	92.219	Astatotilapia_calliptera
ENSACIG00000008632	a1cf	100	75.041	ENSAMXG00000018180	a1cf	100	74.919	Astyanax_mexicanus
ENSACIG00000008632	a1cf	100	78.182	ENSBTAG00000021195	A1CF	100	78.198	Bos_taurus
ENSACIG00000008632	a1cf	100	76.835	ENSCJAG00000005045	A1CF	100	75.530	Callithrix_jacchus
ENSACIG00000008632	a1cf	100	76.509	ENSCAFG00000015581	A1CF	100	75.530	Canis_familiaris
ENSACIG00000008632	a1cf	100	76.509	ENSCAFG00020026421	A1CF	98	83.000	Canis_lupus_dingo
ENSACIG00000008632	a1cf	100	77.325	ENSCHIG00000020411	A1CF	100	76.183	Capra_hircus
ENSACIG00000008632	a1cf	94	77.758	ENSTSYG00000001755	A1CF	100	76.182	Carlito_syrichta
ENSACIG00000008632	a1cf	100	74.344	ENSCAPG00000017386	A1CF	100	76.358	Cavia_aperea
ENSACIG00000008632	a1cf	100	75.856	ENSCPOG00000009807	A1CF	100	74.062	Cavia_porcellus
ENSACIG00000008632	a1cf	100	76.672	ENSCCAG00000018168	A1CF	100	75.204	Cebus_capucinus
ENSACIG00000008632	a1cf	100	77.521	ENSCATG00000043715	A1CF	100	76.364	Cercocebus_atys
ENSACIG00000008632	a1cf	100	75.856	ENSCLAG00000010424	A1CF	100	74.551	Chinchilla_lanigera
ENSACIG00000008632	a1cf	100	76.672	ENSCSAG00000007032	A1CF	100	75.530	Chlorocebus_sabaeus
ENSACIG00000008632	a1cf	98	75.084	ENSCHOG00000009089	A1CF	98	73.746	Choloepus_hoffmanni
ENSACIG00000008632	a1cf	100	76.183	ENSCPBG00000026464	A1CF	100	74.878	Chrysemys_picta_bellii
ENSACIG00000008632	a1cf	100	76.509	ENSCANG00000038032	A1CF	100	75.367	Colobus_angolensis_palliatus
ENSACIG00000008632	a1cf	100	75.856	ENSCGRG00001017413	A1cf	100	74.715	Cricetulus_griseus_chok1gshd
ENSACIG00000008632	a1cf	100	75.204	ENSCGRG00000017332	A1cf	100	74.225	Cricetulus_griseus_crigri
ENSACIG00000008632	a1cf	100	86.201	ENSCSEG00000002361	a1cf	100	86.851	Cynoglossus_semilaevis
ENSACIG00000008632	a1cf	100	90.445	ENSCVAG00000010520	a1cf	100	88.633	Cyprinodon_variegatus
ENSACIG00000008632	a1cf	100	83.306	ENSDARG00000002968	a1cf	100	82.975	Danio_rerio
ENSACIG00000008632	a1cf	100	76.183	ENSDNOG00000002829	A1CF	100	74.878	Dasypus_novemcinctus
ENSACIG00000008632	a1cf	82	85.145	ENSETEG00000012527	A1CF	81	85.145	Echinops_telfairi
ENSACIG00000008632	a1cf	100	76.873	ENSEASG00005012924	A1CF	100	75.733	Equus_asinus_asinus
ENSACIG00000008632	a1cf	100	76.384	ENSECAG00000010424	A1CF	100	75.244	Equus_caballus
ENSACIG00000008632	a1cf	78	68.211	ENSEEUG00000000013	A1CF	97	67.467	Erinaceus_europaeus
ENSACIG00000008632	a1cf	100	80.587	ENSELUG00000003159	a1cf	100	79.772	Esox_lucius
ENSACIG00000008632	a1cf	100	76.529	ENSFCAG00000011179	A1CF	100	75.868	Felis_catus
ENSACIG00000008632	a1cf	100	78.347	ENSFALG00000013183	A1CF	100	77.025	Ficedula_albicollis
ENSACIG00000008632	a1cf	100	76.860	ENSFDAG00000019371	A1CF	100	75.537	Fukomys_damarensis
ENSACIG00000008632	a1cf	100	85.008	ENSFHEG00000019652	a1cf	96	91.406	Fundulus_heteroclitus
ENSACIG00000008632	a1cf	100	76.683	ENSGMOG00000018943	a1cf	100	75.534	Gadus_morhua
ENSACIG00000008632	a1cf	95	76.552	ENSGALG00000003765	A1CF	96	75.172	Gallus_gallus
ENSACIG00000008632	a1cf	100	82.208	ENSGAFG00000014868	a1cf	100	81.713	Gambusia_affinis
ENSACIG00000008632	a1cf	100	85.366	ENSGACG00000010241	a1cf	100	84.228	Gasterosteus_aculeatus
ENSACIG00000008632	a1cf	94	76.166	ENSGAGG00000016508	A1CF	97	74.784	Gopherus_agassizii
ENSACIG00000008632	a1cf	100	76.346	ENSGGOG00000009670	A1CF	100	75.041	Gorilla_gorilla
ENSACIG00000008632	a1cf	100	95.364	ENSHBUG00000021959	a1cf	100	95.364	Haplochromis_burtoni
ENSACIG00000008632	a1cf	100	76.020	ENSHGLG00000008955	A1CF	100	74.878	Heterocephalus_glaber_female
ENSACIG00000008632	a1cf	100	75.367	ENSHGLG00100000518	A1CF	100	74.225	Heterocephalus_glaber_male
ENSACIG00000008632	a1cf	100	74.639	ENSHCOG00000017669	a1cf	100	75.281	Hippocampus_comes
ENSACIG00000008632	a1cf	89	83.607	ENSIPUG00000010367	a1cf	99	81.514	Ictalurus_punctatus
ENSACIG00000008632	a1cf	100	88.188	ENSKMAG00000006568	a1cf	100	86.408	Kryptolebias_marmoratus
ENSACIG00000008632	a1cf	99	87.967	ENSLBEG00000020994	a1cf	99	86.179	Labrus_bergylta
ENSACIG00000008632	a1cf	100	79.008	ENSLACG00000008061	A1CF	100	77.190	Latimeria_chalumnae
ENSACIG00000008632	a1cf	100	80.587	ENSLOCG00000006302	a1cf	100	78.303	Lepisosteus_oculatus
ENSACIG00000008632	a1cf	100	76.509	ENSLAFG00000015462	A1CF	100	76.835	Loxodonta_africana
ENSACIG00000008632	a1cf	100	77.521	ENSMFAG00000035948	A1CF	100	76.364	Macaca_fascicularis
ENSACIG00000008632	a1cf	100	77.521	ENSMMUG00000007077	A1CF	100	76.364	Macaca_mulatta
ENSACIG00000008632	a1cf	100	77.355	ENSMNEG00000031454	A1CF	100	76.198	Macaca_nemestrina
ENSACIG00000008632	a1cf	100	76.509	ENSMLEG00000037223	A1CF	100	75.367	Mandrillus_leucophaeus
ENSACIG00000008632	a1cf	100	87.664	ENSMAMG00000010402	a1cf	100	87.993	Mastacembelus_armatus
ENSACIG00000008632	a1cf	100	89.869	ENSMZEG00005013245	a1cf	100	90.049	Maylandia_zebra
ENSACIG00000008632	a1cf	100	76.059	ENSMGAG00000001507	A1CF	100	74.756	Meleagris_gallopavo
ENSACIG00000008632	a1cf	100	75.530	ENSMAUG00000007422	A1cf	100	74.551	Mesocricetus_auratus
ENSACIG00000008632	a1cf	100	77.265	ENSMICG00000003377	A1CF	100	77.759	Microcebus_murinus
ENSACIG00000008632	a1cf	100	75.856	ENSMOCG00000021536	A1cf	100	74.551	Microtus_ochrogaster
ENSACIG00000008632	a1cf	100	79.407	ENSMMOG00000009422	a1cf	100	80.231	Mola_mola
ENSACIG00000008632	a1cf	89	79.291	ENSMODG00000016478	A1CF	97	78.358	Monodelphis_domestica
ENSACIG00000008632	a1cf	100	81.954	ENSMALG00000012992	a1cf	100	81.788	Monopterus_albus
ENSACIG00000008632	a1cf	100	76.694	MGP_CAROLIEiJ_G0022873	A1cf	100	75.372	Mus_caroli
ENSACIG00000008632	a1cf	100	76.694	ENSMUSG00000052595	A1cf	99	82.333	Mus_musculus
ENSACIG00000008632	a1cf	100	75.868	MGP_PahariEiJ_G0014366	A1cf	100	74.545	Mus_pahari
ENSACIG00000008632	a1cf	100	76.694	MGP_SPRETEiJ_G0023792	A1cf	100	75.372	Mus_spretus
ENSACIG00000008632	a1cf	100	70.962	ENSMPUG00000016971	A1CF	100	69.984	Mustela_putorius_furo
ENSACIG00000008632	a1cf	100	76.509	ENSMLUG00000016071	A1CF	100	75.693	Myotis_lucifugus
ENSACIG00000008632	a1cf	100	76.835	ENSNGAG00000015136	A1cf	100	75.530	Nannospalax_galili
ENSACIG00000008632	a1cf	100	95.199	ENSNBRG00000001712	a1cf	100	95.199	Neolamprologus_brichardi
ENSACIG00000008632	a1cf	100	76.998	ENSNLEG00000012028	A1CF	100	75.693	Nomascus_leucogenys
ENSACIG00000008632	a1cf	94	77.758	ENSMEUG00000015909	A1CF	100	76.357	Notamacropus_eugenii
ENSACIG00000008632	a1cf	88	68.519	ENSOPRG00000010667	A1CF	100	66.014	Ochotona_princeps
ENSACIG00000008632	a1cf	100	95.199	ENSONIG00000019105	a1cf	100	95.199	Oreochromis_niloticus
ENSACIG00000008632	a1cf	78	78.059	ENSOANG00000007360	A1CF	99	77.637	Ornithorhynchus_anatinus
ENSACIG00000008632	a1cf	100	77.025	ENSOCUG00000011587	A1CF	100	75.702	Oryctolagus_cuniculus
ENSACIG00000008632	a1cf	100	83.415	ENSORLG00000013342	a1cf	100	82.114	Oryzias_latipes
ENSACIG00000008632	a1cf	100	85.390	ENSORLG00020000586	a1cf	100	84.416	Oryzias_latipes_hni
ENSACIG00000008632	a1cf	100	85.390	ENSORLG00015018569	a1cf	100	84.416	Oryzias_latipes_hsok
ENSACIG00000008632	a1cf	100	86.985	ENSOMEG00000013531	a1cf	100	85.338	Oryzias_melastigma
ENSACIG00000008632	a1cf	100	75.367	ENSOGAG00000012884	A1CF	100	75.367	Otolemur_garnettii
ENSACIG00000008632	a1cf	100	77.162	ENSOARG00000013695	A1CF	100	76.020	Ovis_aries
ENSACIG00000008632	a1cf	97	75.253	ENSPPAG00000028115	A1CF	99	78.193	Pan_paniscus
ENSACIG00000008632	a1cf	100	75.530	ENSPPRG00000012180	A1CF	100	74.878	Panthera_pardus
ENSACIG00000008632	a1cf	100	75.530	ENSPTIG00000021223	A1CF	100	74.878	Panthera_tigris_altaica
ENSACIG00000008632	a1cf	100	77.355	ENSPTRG00000002508	A1CF	100	76.033	Pan_troglodytes
ENSACIG00000008632	a1cf	100	77.521	ENSPANG00000021988	A1CF	100	76.364	Papio_anubis
ENSACIG00000008632	a1cf	100	80.424	ENSPKIG00000025176	a1cf	100	79.935	Paramormyrops_kingsleyae
ENSACIG00000008632	a1cf	100	77.355	ENSPSIG00000010318	A1CF	100	75.868	Pelodiscus_sinensis
ENSACIG00000008632	a1cf	98	71.429	ENSPMGG00000013359	a1cf	99	72.315	Periophthalmus_magnuspinnatus
ENSACIG00000008632	a1cf	100	76.020	ENSPEMG00000015021	A1cf	100	74.715	Peromyscus_maniculatus_bairdii
ENSACIG00000008632	a1cf	100	76.860	ENSPCIG00000002175	A1CF	100	77.190	Phascolarctos_cinereus
ENSACIG00000008632	a1cf	100	89.106	ENSPFOG00000007437	-	100	87.317	Poecilia_formosa
ENSACIG00000008632	a1cf	100	89.268	ENSPFOG00000006683	a1cf	100	87.480	Poecilia_formosa
ENSACIG00000008632	a1cf	100	90.445	ENSPLAG00000001210	-	100	88.633	Poecilia_latipinna
ENSACIG00000008632	a1cf	100	90.445	ENSPLAG00000000026	a1cf	100	88.633	Poecilia_latipinna
ENSACIG00000008632	a1cf	100	82.450	ENSPMEG00000000921	a1cf	100	82.285	Poecilia_mexicana
ENSACIG00000008632	a1cf	100	81.373	ENSPMEG00000015529	-	100	81.209	Poecilia_mexicana
ENSACIG00000008632	a1cf	100	88.780	ENSPREG00000016298	a1cf	100	86.992	Poecilia_reticulata
ENSACIG00000008632	a1cf	100	78.017	ENSPPYG00000002819	A1CF	100	76.694	Pongo_abelii
ENSACIG00000008632	a1cf	80	61.203	ENSPCAG00000006463	A1CF	79	60.788	Procavia_capensis
ENSACIG00000008632	a1cf	100	76.183	ENSPCOG00000024172	A1CF	100	76.509	Propithecus_coquereli
ENSACIG00000008632	a1cf	100	94.444	ENSPNYG00000017944	a1cf	100	94.444	Pundamilia_nyererei
ENSACIG00000008632	a1cf	100	83.717	ENSPNAG00000007704	a1cf	100	82.867	Pygocentrus_nattereri
ENSACIG00000008632	a1cf	100	77.025	ENSRNOG00000033195	A1cf	100	75.702	Rattus_norvegicus
ENSACIG00000008632	a1cf	100	71.220	ENSRBIG00000042892	A1CF	100	74.423	Rhinopithecus_bieti
ENSACIG00000008632	a1cf	100	76.509	ENSRROG00000041398	A1CF	100	75.367	Rhinopithecus_roxellana
ENSACIG00000008632	a1cf	100	77.162	ENSSBOG00000021930	A1CF	100	76.154	Saimiri_boliviensis_boliviensis
ENSACIG00000008632	a1cf	100	77.521	ENSSHAG00000005096	A1CF	100	76.198	Sarcophilus_harrisii
ENSACIG00000008632	a1cf	100	83.690	ENSSFOG00015011774	a1cf	100	82.372	Scleropages_formosus
ENSACIG00000008632	a1cf	100	89.070	ENSSMAG00000013271	a1cf	100	87.439	Scophthalmus_maximus
ENSACIG00000008632	a1cf	100	88.455	ENSSDUG00000013930	a1cf	100	87.480	Seriola_dumerili
ENSACIG00000008632	a1cf	100	83.775	ENSSLDG00000004290	a1cf	100	83.775	Seriola_lalandi_dorsalis
ENSACIG00000008632	a1cf	95	69.861	ENSSARG00000005940	A1CF	95	69.686	Sorex_araneus
ENSACIG00000008632	a1cf	95	74.658	ENSSPUG00000006797	A1CF	95	72.991	Sphenodon_punctatus
ENSACIG00000008632	a1cf	100	77.651	ENSSSCG00000010431	A1CF	100	76.509	Sus_scrofa
ENSACIG00000008632	a1cf	100	77.524	ENSTGUG00000005090	A1CF	100	75.896	Taeniopygia_guttata
ENSACIG00000008632	a1cf	100	85.552	ENSTRUG00000001982	a1cf	100	84.253	Takifugu_rubripes
ENSACIG00000008632	a1cf	100	86.224	ENSTNIG00000003580	a1cf	100	84.441	Tetraodon_nigroviridis
ENSACIG00000008632	a1cf	97	72.184	ENSTTRG00000013190	A1CF	95	71.160	Tursiops_truncatus
ENSACIG00000008632	a1cf	100	77.686	ENSUAMG00000020065	A1CF	100	76.198	Ursus_americanus
ENSACIG00000008632	a1cf	100	76.183	ENSUMAG00000011162	A1CF	100	74.878	Ursus_maritimus
ENSACIG00000008632	a1cf	87	74.669	ENSVPAG00000006130	A1CF	86	73.157	Vicugna_pacos
ENSACIG00000008632	a1cf	100	77.686	ENSVVUG00000002504	A1CF	100	76.694	Vulpes_vulpes
ENSACIG00000008632	a1cf	100	70.636	ENSXETG00000006611	a1cf	100	69.657	Xenopus_tropicalis
ENSACIG00000008632	a1cf	100	90.115	ENSXCOG00000003302	a1cf	100	88.633	Xiphophorus_couchianus
ENSACIG00000008632	a1cf	100	88.943	ENSXMAG00000016703	a1cf	100	87.480	Xiphophorus_maculatus