EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000008853 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2755 bases
Position: chrCCOE01000366.1:555235-557989
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000011341	RRM_1	PF00076.22	2.6e-25	1	2
ENSACIP00000011341	RRM_1	PF00076.22	2.6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000011662	-	894	-	ENSACIP00000011341	297 (aa)	-	-

Gene Model

Click here to download ENSACIG00000008853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000008853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000008853	raver1	89	58.052	ENSACIG00000012229	-	89	58.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000008853	raver1	81	67.490	ENSG00000161847	RAVER1	89	57.647	Homo_sapiens
ENSACIG00000008853	raver1	93	78.339	ENSDARG00000052617	raver1	89	77.855	Danio_rerio
ENSACIG00000008853	raver1	96	79.655	ENSFHEG00000001653	raver1	96	79.655	Fundulus_heteroclitus
ENSACIG00000008853	raver1	96	92.683	ENSONIG00000001559	raver1	93	92.683	Oreochromis_niloticus
ENSACIG00000008853	raver1	91	74.908	ENSPKIG00000015863	raver1	91	71.918	Paramormyrops_kingsleyae
ENSACIG00000008853	raver1	97	84.247	ENSPMGG00000001451	raver1	96	84.247	Periophthalmus_magnuspinnatus
ENSACIG00000008853	raver1	90	75.188	ENSSFOG00015023666	raver1	96	72.028	Scleropages_formosus
ENSACIG00000008853	raver1	96	80.345	ENSTNIG00000018570	raver1	100	80.345	Tetraodon_nigroviridis