EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000009006 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 3354 bases
Position: chrCCOE01001770.1:65417-68770
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000011546	MMR_HSR1	PF01926.23	7.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000011875	-	645	-	ENSACIP00000011546	214 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000009006	zgc:171927	79	46.409	ENSACIG00000021459	zgc:101559	79	46.409
ENSACIG00000009006	zgc:171927	68	43.333	ENSACIG00000013119	-	75	43.046
ENSACIG00000009006	zgc:171927	55	30.508	ENSACIG00000009595	arl8bb	61	30.508
ENSACIG00000009006	zgc:171927	82	81.006	ENSACIG00000019049	rab1ab	89	87.121
ENSACIG00000009006	zgc:171927	82	42.373	ENSACIG00000000154	RAB39B	83	42.373
ENSACIG00000009006	zgc:171927	85	39.572	ENSACIG00000022520	rab33a	83	39.572
ENSACIG00000009006	zgc:171927	74	59.748	ENSACIG00000003157	-	84	59.748
ENSACIG00000009006	zgc:171927	57	32.800	ENSACIG00000013359	arl4d	61	32.800
ENSACIG00000009006	zgc:171927	96	35.577	ENSACIG00000014605	rab6a	94	35.577
ENSACIG00000009006	zgc:171927	58	31.343	ENSACIG00000018839	-	66	31.343
ENSACIG00000009006	zgc:171927	85	31.658	ENSACIG00000018406	rasl11a	78	31.658
ENSACIG00000009006	zgc:171927	99	44.550	ENSACIG00000017403	rab11al	96	44.550
ENSACIG00000009006	zgc:171927	80	45.930	ENSACIG00000020616	rab12	70	45.930
ENSACIG00000009006	zgc:171927	55	30.508	ENSACIG00000008614	arl8ba	61	30.508
ENSACIG00000009006	zgc:171927	80	38.068	ENSACIG00000022208	-	85	38.068
ENSACIG00000009006	zgc:171927	75	39.506	ENSACIG00000000100	kras	52	39.506
ENSACIG00000009006	zgc:171927	95	37.379	ENSACIG00000007154	rab6ba	93	37.379
ENSACIG00000009006	zgc:171927	77	39.053	ENSACIG00000013630	RAB7A	82	39.053
ENSACIG00000009006	zgc:171927	79	51.786	ENSACIG00000024376	-	77	51.786
ENSACIG00000009006	zgc:171927	93	46.500	ENSACIG00000024374	rab11ba	76	46.970
ENSACIG00000009006	zgc:171927	97	34.434	ENSACIG00000007739	rab9b	98	34.434
ENSACIG00000009006	zgc:171927	79	41.758	ENSACIG00000021855	rab33ba	76	41.758
ENSACIG00000009006	zgc:171927	82	46.023	ENSACIG00000019251	rab5aa	83	46.023
ENSACIG00000009006	zgc:171927	74	37.654	ENSACIG00000011024	si:dkey-13a21.4	79	37.654
ENSACIG00000009006	zgc:171927	80	45.714	ENSACIG00000009306	RAB15	83	45.714
ENSACIG00000009006	zgc:171927	96	35.577	ENSACIG00000010914	RAB41	92	35.577
ENSACIG00000009006	zgc:171927	55	30.252	ENSACIG00000009110	arl4aa	59	30.252
ENSACIG00000009006	zgc:171927	76	44.785	ENSACIG00000010896	rab5c	81	43.182
ENSACIG00000009006	zgc:171927	79	50.296	ENSACIG00000010619	rab15	79	50.296
ENSACIG00000009006	zgc:171927	80	58.140	ENSACIG00000008584	rab13	83	58.140
ENSACIG00000009006	zgc:171927	54	31.967	ENSACIG00000014610	zgc:110286	63	31.967
ENSACIG00000009006	zgc:171927	80	42.857	ENSACIG00000016958	si:dkey-34d22.5	79	42.857
ENSACIG00000009006	zgc:171927	79	43.275	ENSACIG00000023837	-	80	43.275
ENSACIG00000009006	zgc:171927	84	33.520	ENSACIG00000020496	rab23	87	33.333
ENSACIG00000009006	zgc:171927	79	54.167	ENSACIG00000003092	rab11a	78	54.167
ENSACIG00000009006	zgc:171927	97	34.123	ENSACIG00000022381	-	96	34.123
ENSACIG00000009006	zgc:171927	75	50.617	ENSACIG00000008102	rab18b	79	50.617
ENSACIG00000009006	zgc:171927	77	43.976	ENSACIG00000023222	-	72	43.976
ENSACIG00000009006	zgc:171927	73	34.810	ENSACIG00000000670	rabl2	68	34.810
ENSACIG00000009006	zgc:171927	76	34.756	ENSACIG00000017824	rras	83	34.756
ENSACIG00000009006	zgc:171927	82	30.387	ENSACIG00000009071	rheb	94	30.387
ENSACIG00000009006	zgc:171927	75	41.975	ENSACIG00000009617	rab18a	76	41.975
ENSACIG00000009006	zgc:171927	75	34.545	ENSACIG00000006558	-	82	34.545
ENSACIG00000009006	zgc:171927	74	39.752	ENSACIG00000000642	rab36	61	39.752
ENSACIG00000009006	zgc:171927	80	38.372	ENSACIG00000006949	RAB17	75	38.372
ENSACIG00000009006	zgc:171927	98	41.905	ENSACIG00000017414	rab25b	96	41.905
ENSACIG00000009006	zgc:171927	76	37.195	ENSACIG00000000699	hrasb	86	37.195
ENSACIG00000009006	zgc:171927	55	47.059	ENSACIG00000008620	rab34a	53	47.059
ENSACIG00000009006	zgc:171927	100	69.444	ENSACIG00000014625	-	100	69.444
ENSACIG00000009006	zgc:171927	98	41.905	ENSACIG00000019803	rab25a	95	41.905
ENSACIG00000009006	zgc:171927	72	37.736	ENSACIG00000018043	rab9a	79	37.736
ENSACIG00000009006	zgc:171927	80	41.040	ENSACIG00000014012	rab22a	87	41.040
ENSACIG00000009006	zgc:171927	55	32.203	ENSACIG00000000868	arl8a	61	32.203
ENSACIG00000009006	zgc:171927	71	40.523	ENSACIG00000014094	rab6bb	75	40.523
ENSACIG00000009006	zgc:171927	62	35.821	ENSACIG00000015128	si:ch73-116o1.2	65	35.821
ENSACIG00000009006	zgc:171927	66	52.817	ENSACIG00000019631	rab11bb	74	52.817
ENSACIG00000009006	zgc:171927	96	34.450	ENSACIG00000004859	rab34b	83	34.906
ENSACIG00000009006	zgc:171927	80	42.775	ENSACIG00000003102	rab42a	79	42.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009006	zgc:171927	100	95.794	ENSAPOG00000004980	-	100	95.794	Acanthochromis_polyacanthus
ENSACIG00000009006	zgc:171927	100	93.458	ENSAOCG00000024149	-	100	93.458	Amphiprion_ocellaris
ENSACIG00000009006	zgc:171927	71	89.677	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSACIG00000009006	zgc:171927	100	93.925	ENSAPEG00000022171	zgc:171927	99	93.925	Amphiprion_percula
ENSACIG00000009006	zgc:171927	100	94.393	ENSATEG00000003430	zgc:171927	100	94.393	Anabas_testudineus
ENSACIG00000009006	zgc:171927	100	96.729	ENSACLG00000013734	-	100	96.729	Astatotilapia_calliptera
ENSACIG00000009006	zgc:171927	100	80.465	ENSAMXG00000039486	zgc:171927	100	80.465	Astyanax_mexicanus
ENSACIG00000009006	zgc:171927	100	91.589	ENSCSEG00000014416	zgc:171927	100	91.589	Cynoglossus_semilaevis
ENSACIG00000009006	zgc:171927	100	93.458	ENSCVAG00000009222	zgc:171927	100	93.458	Cyprinodon_variegatus
ENSACIG00000009006	zgc:171927	100	79.535	ENSDARG00000033056	zgc:171927	100	79.535	Danio_rerio
ENSACIG00000009006	zgc:171927	100	79.630	ENSELUG00000011680	zgc:171927	100	79.630	Esox_lucius
ENSACIG00000009006	zgc:171927	100	93.925	ENSFHEG00000022176	zgc:171927	100	93.925	Fundulus_heteroclitus
ENSACIG00000009006	zgc:171927	98	81.517	ENSGMOG00000004979	-	97	81.517	Gadus_morhua
ENSACIG00000009006	zgc:171927	98	92.823	ENSGAFG00000015702	zgc:171927	84	92.823	Gambusia_affinis
ENSACIG00000009006	zgc:171927	100	92.991	ENSGACG00000013401	zgc:171927	99	92.991	Gasterosteus_aculeatus
ENSACIG00000009006	zgc:171927	100	96.729	ENSHBUG00000002397	-	100	96.729	Haplochromis_burtoni
ENSACIG00000009006	zgc:171927	100	92.991	ENSKMAG00000009856	zgc:171927	100	92.991	Kryptolebias_marmoratus
ENSACIG00000009006	zgc:171927	100	90.654	ENSLBEG00000005791	-	100	90.654	Labrus_bergylta
ENSACIG00000009006	zgc:171927	98	89.952	ENSLBEG00000027226	-	89	89.952	Labrus_bergylta
ENSACIG00000009006	zgc:171927	98	73.333	ENSLOCG00000014692	zgc:171927	96	73.333	Lepisosteus_oculatus
ENSACIG00000009006	zgc:171927	100	92.991	ENSMAMG00000020135	zgc:171927	100	92.991	Mastacembelus_armatus
ENSACIG00000009006	zgc:171927	100	96.729	ENSMZEG00005024685	-	100	96.729	Maylandia_zebra
ENSACIG00000009006	zgc:171927	100	89.720	ENSMMOG00000009833	-	100	89.720	Mola_mola
ENSACIG00000009006	zgc:171927	100	91.589	ENSMALG00000021129	zgc:171927	100	91.589	Monopterus_albus
ENSACIG00000009006	zgc:171927	100	96.262	ENSNBRG00000006202	zgc:171927	100	96.262	Neolamprologus_brichardi
ENSACIG00000009006	zgc:171927	100	90.654	ENSORLG00000000602	zgc:171927	100	90.654	Oryzias_latipes
ENSACIG00000009006	zgc:171927	100	90.654	ENSORLG00020021071	zgc:171927	100	90.654	Oryzias_latipes_hni
ENSACIG00000009006	zgc:171927	100	90.187	ENSORLG00015010098	zgc:171927	100	90.187	Oryzias_latipes_hsok
ENSACIG00000009006	zgc:171927	100	92.056	ENSOMEG00000020594	zgc:171927	100	92.056	Oryzias_melastigma
ENSACIG00000009006	zgc:171927	100	92.991	ENSPFOG00000013810	zgc:171927	99	92.991	Poecilia_formosa
ENSACIG00000009006	zgc:171927	100	92.056	ENSPLAG00000005869	zgc:171927	100	92.056	Poecilia_latipinna
ENSACIG00000009006	zgc:171927	100	92.991	ENSPMEG00000022350	zgc:171927	100	92.991	Poecilia_mexicana
ENSACIG00000009006	zgc:171927	100	93.925	ENSPREG00000017517	zgc:171927	100	93.925	Poecilia_reticulata
ENSACIG00000009006	zgc:171927	100	96.729	ENSPNYG00000007520	-	100	96.729	Pundamilia_nyererei
ENSACIG00000009006	zgc:171927	100	80.465	ENSPNAG00000029574	zgc:171927	100	80.465	Pygocentrus_nattereri
ENSACIG00000009006	zgc:171927	100	78.605	ENSSFOG00015005464	zgc:171927	99	78.605	Scleropages_formosus
ENSACIG00000009006	zgc:171927	100	88.785	ENSSMAG00000004416	-	100	88.785	Scophthalmus_maximus
ENSACIG00000009006	zgc:171927	100	97.196	ENSSDUG00000004445	zgc:171927	100	97.196	Seriola_dumerili
ENSACIG00000009006	zgc:171927	100	97.196	ENSSLDG00000018024	zgc:171927	100	97.196	Seriola_lalandi_dorsalis
ENSACIG00000009006	zgc:171927	100	94.860	ENSSPAG00000013533	zgc:171927	100	94.860	Stegastes_partitus
ENSACIG00000009006	zgc:171927	100	93.925	ENSXCOG00000010695	zgc:171927	100	93.925	Xiphophorus_couchianus
ENSACIG00000009006	zgc:171927	100	94.393	ENSXMAG00000004683	zgc:171927	100	94.393	Xiphophorus_maculatus