EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009107 (Gene tree)
Gene ID: -
Gene Symbol: zgc:112982
Alias: fb48h12|fb93h01|wu:fb48h12|wu:fb93h01
Full Name: zgc:112982
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4462 bases
Position: chrCCOE01000301.1:175924-180385
Accession: ZDB-GENE-050306-55
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000011690	THRAP3_BCLAF1	PF15440.6	1.3e-26	1	1
ENSACIP00000011700	THRAP3_BCLAF1	PF15440.6	3.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012031	-	444	-	ENSACIP00000011700	147 (aa)	-	-
ENSACIT00000012021	-	624	-	ENSACIP00000011690	207 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009107	zgc:112982	56	38.971	ENSG00000173681	BCLAF3	58	38.971	Homo_sapiens
ENSACIG00000009107	zgc:112982	73	59.091	ENSAMXG00000013954	-	53	61.062	Astyanax_mexicanus
ENSACIG00000009107	zgc:112982	55	36.634	ENSCAFG00020004575	-	53	36.090	Canis_lupus_dingo
ENSACIG00000009107	zgc:112982	73	48.837	ENSDARG00000001829	zgc:112982	62	52.976	Danio_rerio
ENSACIG00000009107	zgc:112982	76	66.087	ENSELUG00000012313	-	68	52.439	Esox_lucius
ENSACIG00000009107	zgc:112982	88	59.389	ENSLBEG00000017147	-	89	59.389	Labrus_bergylta
ENSACIG00000009107	zgc:112982	88	65.438	ENSMZEG00005020613	-	92	65.438	Maylandia_zebra
ENSACIG00000009107	zgc:112982	85	70.400	ENSMMOG00000013104	zgc:112982	90	62.048	Mola_mola
ENSACIG00000009107	zgc:112982	89	66.667	ENSMALG00000017681	-	93	60.000	Monopterus_albus
ENSACIG00000009107	zgc:112982	88	54.976	ENSOMEG00000006057	-	86	57.576	Oryzias_melastigma
ENSACIG00000009107	zgc:112982	92	63.274	ENSPNYG00000024269	zgc:112982	95	60.833	Pundamilia_nyererei
ENSACIG00000009107	zgc:112982	73	56.410	ENSPNAG00000021161	zgc:112982	58	57.265	Pygocentrus_nattereri
ENSACIG00000009107	zgc:112982	55	39.604	ENSRBIG00000037769	-	64	39.098	Rhinopithecus_bieti
ENSACIG00000009107	zgc:112982	77	56.667	ENSSMAG00000009714	-	87	54.043	Scophthalmus_maximus
ENSACIG00000009107	zgc:112982	55	34.951	ENSUAMG00000021444	-	57	35.556	Ursus_americanus