EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009331 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8457 bases
Position: chrCCOE01000712.1:256024-264480
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000011979	Beta-Casp	PF10996.8	4.7e-21	1	1
ENSACIP00000011979	Lactamase_B	PF00753.27	3.9e-06	1	1
ENSACIP00000011979	RMMBL	PF07521.12	7.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012321	-	2367	-	ENSACIP00000011979	788 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009331	cpsf2	100	86.203	ENSG00000165934	CPSF2	100	88.750	Homo_sapiens
ENSACIG00000009331	cpsf2	100	96.574	ENSAPOG00000001242	cpsf2	100	96.574	Acanthochromis_polyacanthus
ENSACIG00000009331	cpsf2	100	97.081	ENSAOCG00000014095	cpsf2	100	97.081	Amphiprion_ocellaris
ENSACIG00000009331	cpsf2	100	97.081	ENSAPEG00000009158	cpsf2	100	97.081	Amphiprion_percula
ENSACIG00000009331	cpsf2	96	95.652	ENSATEG00000017644	cpsf2	99	95.310	Anabas_testudineus
ENSACIG00000009331	cpsf2	100	85.588	ENSAPLG00000006330	CPSF2	100	85.588	Anas_platyrhynchos
ENSACIG00000009331	cpsf2	100	85.190	ENSACAG00000009245	CPSF2	100	85.190	Anolis_carolinensis
ENSACIG00000009331	cpsf2	100	86.456	ENSANAG00000022915	CPSF2	100	86.456	Aotus_nancymaae
ENSACIG00000009331	cpsf2	100	90.253	ENSAMXG00000018696	cpsf2	100	90.253	Astyanax_mexicanus
ENSACIG00000009331	cpsf2	100	86.329	ENSBTAG00000010227	CPSF2	100	86.329	Bos_taurus
ENSACIG00000009331	cpsf2	100	42.037	WBGene00017313	cpsf-2	100	41.920	Caenorhabditis_elegans
ENSACIG00000009331	cpsf2	100	86.456	ENSCJAG00000018069	CPSF2	100	86.456	Callithrix_jacchus
ENSACIG00000009331	cpsf2	100	86.203	ENSCAFG00000010909	CPSF2	100	86.203	Canis_familiaris
ENSACIG00000009331	cpsf2	100	86.203	ENSCAFG00020020670	CPSF2	100	86.203	Canis_lupus_dingo
ENSACIG00000009331	cpsf2	100	86.329	ENSCHIG00000023848	CPSF2	100	86.329	Capra_hircus
ENSACIG00000009331	cpsf2	100	86.329	ENSTSYG00000009036	CPSF2	100	86.329	Carlito_syrichta
ENSACIG00000009331	cpsf2	100	86.329	ENSCPOG00000010899	CPSF2	100	86.329	Cavia_porcellus
ENSACIG00000009331	cpsf2	100	86.456	ENSCCAG00000028088	CPSF2	100	86.456	Cebus_capucinus
ENSACIG00000009331	cpsf2	100	86.329	ENSCATG00000030132	CPSF2	100	86.329	Cercocebus_atys
ENSACIG00000009331	cpsf2	100	86.329	ENSCLAG00000012404	CPSF2	100	86.329	Chinchilla_lanigera
ENSACIG00000009331	cpsf2	100	86.329	ENSCSAG00000011300	CPSF2	100	86.329	Chlorocebus_sabaeus
ENSACIG00000009331	cpsf2	100	80.759	ENSCHOG00000012904	CPSF2	100	80.759	Choloepus_hoffmanni
ENSACIG00000009331	cpsf2	100	85.443	ENSCPBG00000008766	CPSF2	97	85.443	Chrysemys_picta_bellii
ENSACIG00000009331	cpsf2	100	53.540	ENSCING00000007881	-	100	52.795	Ciona_intestinalis
ENSACIG00000009331	cpsf2	94	86.370	ENSCANG00000041651	CPSF2	100	86.351	Colobus_angolensis_palliatus
ENSACIG00000009331	cpsf2	100	85.696	ENSCGRG00001006901	Cpsf2	100	85.696	Cricetulus_griseus_chok1gshd
ENSACIG00000009331	cpsf2	100	85.696	ENSCGRG00000012416	Cpsf2	100	85.696	Cricetulus_griseus_crigri
ENSACIG00000009331	cpsf2	100	94.043	ENSCSEG00000004116	cpsf2	100	94.043	Cynoglossus_semilaevis
ENSACIG00000009331	cpsf2	100	94.670	ENSCVAG00000000095	cpsf2	100	94.670	Cyprinodon_variegatus
ENSACIG00000009331	cpsf2	100	88.875	ENSDARG00000028971	cpsf2	100	88.875	Danio_rerio
ENSACIG00000009331	cpsf2	100	86.329	ENSDNOG00000042757	CPSF2	100	86.329	Dasypus_novemcinctus
ENSACIG00000009331	cpsf2	100	86.329	ENSDORG00000013709	Cpsf2	100	86.329	Dipodomys_ordii
ENSACIG00000009331	cpsf2	100	54.568	FBgn0027873	Cpsf100	100	53.837	Drosophila_melanogaster
ENSACIG00000009331	cpsf2	100	78.382	ENSETEG00000012123	CPSF2	100	78.382	Echinops_telfairi
ENSACIG00000009331	cpsf2	52	76.829	ENSEBUG00000012098	cpsf2	93	76.829	Eptatretus_burgeri
ENSACIG00000009331	cpsf2	89	91.809	ENSEASG00005021193	CPSF2	100	91.809	Equus_asinus_asinus
ENSACIG00000009331	cpsf2	100	86.203	ENSECAG00000023935	CPSF2	100	86.203	Equus_caballus
ENSACIG00000009331	cpsf2	100	89.210	ENSELUG00000008442	cpsf2	100	89.210	Esox_lucius
ENSACIG00000009331	cpsf2	100	86.203	ENSFCAG00000007886	CPSF2	100	86.203	Felis_catus
ENSACIG00000009331	cpsf2	100	85.678	ENSFALG00000002412	CPSF2	100	85.678	Ficedula_albicollis
ENSACIG00000009331	cpsf2	100	86.203	ENSFDAG00000006327	CPSF2	100	86.203	Fukomys_damarensis
ENSACIG00000009331	cpsf2	96	92.680	ENSFHEG00000015465	cpsf2	98	93.455	Fundulus_heteroclitus
ENSACIG00000009331	cpsf2	100	89.786	ENSGMOG00000008761	cpsf2	100	89.786	Gadus_morhua
ENSACIG00000009331	cpsf2	100	86.439	ENSGALG00000010783	CPSF2	100	86.439	Gallus_gallus
ENSACIG00000009331	cpsf2	100	94.924	ENSGAFG00000001407	cpsf2	100	94.924	Gambusia_affinis
ENSACIG00000009331	cpsf2	100	94.924	ENSGACG00000008418	cpsf2	100	94.924	Gasterosteus_aculeatus
ENSACIG00000009331	cpsf2	100	85.316	ENSGAGG00000008287	CPSF2	100	85.316	Gopherus_agassizii
ENSACIG00000009331	cpsf2	100	86.203	ENSGGOG00000011799	CPSF2	100	86.203	Gorilla_gorilla
ENSACIG00000009331	cpsf2	100	96.447	ENSHBUG00000023466	cpsf2	100	96.447	Haplochromis_burtoni
ENSACIG00000009331	cpsf2	100	86.329	ENSHGLG00000018311	CPSF2	100	86.329	Heterocephalus_glaber_female
ENSACIG00000009331	cpsf2	100	86.329	ENSHGLG00100016460	CPSF2	100	86.329	Heterocephalus_glaber_male
ENSACIG00000009331	cpsf2	100	93.020	ENSHCOG00000019527	cpsf2	98	93.020	Hippocampus_comes
ENSACIG00000009331	cpsf2	100	90.506	ENSIPUG00000020857	cpsf2	100	90.506	Ictalurus_punctatus
ENSACIG00000009331	cpsf2	100	86.456	ENSSTOG00000009528	CPSF2	100	86.456	Ictidomys_tridecemlineatus
ENSACIG00000009331	cpsf2	100	86.076	ENSJJAG00000017925	Cpsf2	100	86.076	Jaculus_jaculus
ENSACIG00000009331	cpsf2	100	94.416	ENSKMAG00000019429	cpsf2	100	94.416	Kryptolebias_marmoratus
ENSACIG00000009331	cpsf2	95	94.511	ENSLBEG00000011585	cpsf2	100	94.511	Labrus_bergylta
ENSACIG00000009331	cpsf2	100	84.411	ENSLACG00000019024	CPSF2	100	84.557	Latimeria_chalumnae
ENSACIG00000009331	cpsf2	100	89.507	ENSLOCG00000014102	cpsf2	100	89.507	Lepisosteus_oculatus
ENSACIG00000009331	cpsf2	100	85.732	ENSLAFG00000004891	CPSF2	100	85.732	Loxodonta_africana
ENSACIG00000009331	cpsf2	100	86.329	ENSMFAG00000041212	CPSF2	100	86.329	Macaca_fascicularis
ENSACIG00000009331	cpsf2	100	86.329	ENSMMUG00000000699	CPSF2	100	86.329	Macaca_mulatta
ENSACIG00000009331	cpsf2	100	86.329	ENSMNEG00000031584	CPSF2	100	86.329	Macaca_nemestrina
ENSACIG00000009331	cpsf2	100	86.329	ENSMLEG00000029394	CPSF2	100	86.329	Mandrillus_leucophaeus
ENSACIG00000009331	cpsf2	100	96.193	ENSMAMG00000004235	cpsf2	100	96.193	Mastacembelus_armatus
ENSACIG00000009331	cpsf2	100	96.574	ENSMZEG00005001769	cpsf2	100	96.574	Maylandia_zebra
ENSACIG00000009331	cpsf2	100	86.203	ENSMGAG00000013122	CPSF2	100	86.203	Meleagris_gallopavo
ENSACIG00000009331	cpsf2	100	85.696	ENSMAUG00000015160	Cpsf2	100	85.696	Mesocricetus_auratus
ENSACIG00000009331	cpsf2	100	86.329	ENSMICG00000016441	CPSF2	100	86.329	Microcebus_murinus
ENSACIG00000009331	cpsf2	100	85.696	ENSMOCG00000015372	Cpsf2	100	85.696	Microtus_ochrogaster
ENSACIG00000009331	cpsf2	100	89.848	ENSMMOG00000015590	cpsf2	100	89.848	Mola_mola
ENSACIG00000009331	cpsf2	100	86.203	ENSMODG00000002042	CPSF2	100	86.076	Monodelphis_domestica
ENSACIG00000009331	cpsf2	100	92.005	ENSMALG00000022275	cpsf2	100	92.005	Monopterus_albus
ENSACIG00000009331	cpsf2	100	85.823	ENSMUSG00000041781	Cpsf2	100	85.823	Mus_musculus
ENSACIG00000009331	cpsf2	100	85.696	MGP_PahariEiJ_G0029791	Cpsf2	100	85.696	Mus_pahari
ENSACIG00000009331	cpsf2	100	85.823	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.823	Mus_spretus
ENSACIG00000009331	cpsf2	100	86.456	ENSMPUG00000007617	CPSF2	98	86.456	Mustela_putorius_furo
ENSACIG00000009331	cpsf2	100	85.949	ENSMLUG00000005570	CPSF2	100	85.949	Myotis_lucifugus
ENSACIG00000009331	cpsf2	100	86.076	ENSNGAG00000020312	Cpsf2	100	86.076	Nannospalax_galili
ENSACIG00000009331	cpsf2	100	96.827	ENSNBRG00000022402	cpsf2	100	96.827	Neolamprologus_brichardi
ENSACIG00000009331	cpsf2	100	85.443	ENSNLEG00000017132	CPSF2	100	85.443	Nomascus_leucogenys
ENSACIG00000009331	cpsf2	91	94.498	ENSMEUG00000008138	CPSF2	91	94.498	Notamacropus_eugenii
ENSACIG00000009331	cpsf2	94	81.461	ENSOPRG00000008484	-	92	89.718	Ochotona_princeps
ENSACIG00000009331	cpsf2	100	86.076	ENSODEG00000008682	CPSF2	100	86.076	Octodon_degus
ENSACIG00000009331	cpsf2	100	97.081	ENSONIG00000005901	cpsf2	100	97.081	Oreochromis_niloticus
ENSACIG00000009331	cpsf2	100	86.329	ENSOANG00000003822	CPSF2	100	86.329	Ornithorhynchus_anatinus
ENSACIG00000009331	cpsf2	100	86.076	ENSOCUG00000005713	CPSF2	100	86.076	Oryctolagus_cuniculus
ENSACIG00000009331	cpsf2	100	88.452	ENSORLG00000011628	cpsf2	100	88.452	Oryzias_latipes
ENSACIG00000009331	cpsf2	100	94.162	ENSORLG00020016980	cpsf2	100	94.162	Oryzias_latipes_hni
ENSACIG00000009331	cpsf2	100	94.162	ENSORLG00015011910	cpsf2	100	94.162	Oryzias_latipes_hsok
ENSACIG00000009331	cpsf2	100	93.790	ENSOMEG00000022876	cpsf2	100	93.916	Oryzias_melastigma
ENSACIG00000009331	cpsf2	100	83.333	ENSOARG00000012889	CPSF2	100	83.333	Ovis_aries
ENSACIG00000009331	cpsf2	100	86.203	ENSPPAG00000039666	CPSF2	100	86.203	Pan_paniscus
ENSACIG00000009331	cpsf2	99	86.185	ENSPPRG00000010869	CPSF2	100	86.185	Panthera_pardus
ENSACIG00000009331	cpsf2	100	86.203	ENSPTIG00000021202	CPSF2	100	86.203	Panthera_tigris_altaica
ENSACIG00000009331	cpsf2	100	86.203	ENSPTRG00000006651	CPSF2	100	86.203	Pan_troglodytes
ENSACIG00000009331	cpsf2	100	86.329	ENSPANG00000017417	CPSF2	100	86.329	Papio_anubis
ENSACIG00000009331	cpsf2	100	85.696	ENSPKIG00000021453	cpsf2	100	85.696	Paramormyrops_kingsleyae
ENSACIG00000009331	cpsf2	100	84.810	ENSPSIG00000006289	CPSF2	100	84.810	Pelodiscus_sinensis
ENSACIG00000009331	cpsf2	76	87.708	ENSPMGG00000002511	cpsf2	99	87.708	Periophthalmus_magnuspinnatus
ENSACIG00000009331	cpsf2	100	85.949	ENSPEMG00000007917	Cpsf2	100	85.949	Peromyscus_maniculatus_bairdii
ENSACIG00000009331	cpsf2	100	73.810	ENSPMAG00000006205	cpsf2	100	73.810	Petromyzon_marinus
ENSACIG00000009331	cpsf2	100	86.203	ENSPCIG00000011393	CPSF2	100	86.076	Phascolarctos_cinereus
ENSACIG00000009331	cpsf2	100	94.924	ENSPFOG00000018648	cpsf2	100	94.924	Poecilia_formosa
ENSACIG00000009331	cpsf2	100	94.924	ENSPLAG00000019199	cpsf2	99	94.924	Poecilia_latipinna
ENSACIG00000009331	cpsf2	96	94.862	ENSPMEG00000012100	cpsf2	100	94.645	Poecilia_mexicana
ENSACIG00000009331	cpsf2	100	94.416	ENSPREG00000008960	cpsf2	100	94.416	Poecilia_reticulata
ENSACIG00000009331	cpsf2	64	81.746	ENSPPYG00000029685	-	100	81.746	Pongo_abelii
ENSACIG00000009331	cpsf2	100	85.949	ENSPCAG00000012477	CPSF2	100	85.949	Procavia_capensis
ENSACIG00000009331	cpsf2	100	86.456	ENSPCOG00000026387	CPSF2	100	86.456	Propithecus_coquereli
ENSACIG00000009331	cpsf2	64	92.857	ENSPVAG00000004223	CPSF2	65	92.857	Pteropus_vampyrus
ENSACIG00000009331	cpsf2	100	96.701	ENSPNYG00000023356	cpsf2	100	96.701	Pundamilia_nyererei
ENSACIG00000009331	cpsf2	100	91.139	ENSPNAG00000001849	cpsf2	100	91.139	Pygocentrus_nattereri
ENSACIG00000009331	cpsf2	100	85.823	ENSRNOG00000005733	Cpsf2	100	85.823	Rattus_norvegicus
ENSACIG00000009331	cpsf2	100	86.329	ENSRBIG00000044792	CPSF2	100	86.329	Rhinopithecus_bieti
ENSACIG00000009331	cpsf2	100	86.329	ENSRROG00000034875	CPSF2	100	86.329	Rhinopithecus_roxellana
ENSACIG00000009331	cpsf2	100	86.456	ENSSBOG00000024571	CPSF2	100	86.456	Saimiri_boliviensis_boliviensis
ENSACIG00000009331	cpsf2	100	86.456	ENSSHAG00000010458	CPSF2	100	86.456	Sarcophilus_harrisii
ENSACIG00000009331	cpsf2	100	91.772	ENSSFOG00015002117	cpsf2	100	91.899	Scleropages_formosus
ENSACIG00000009331	cpsf2	100	93.916	ENSSMAG00000002001	cpsf2	100	94.677	Scophthalmus_maximus
ENSACIG00000009331	cpsf2	100	96.701	ENSSDUG00000004084	cpsf2	100	96.701	Seriola_dumerili
ENSACIG00000009331	cpsf2	100	96.066	ENSSLDG00000024330	cpsf2	100	96.066	Seriola_lalandi_dorsalis
ENSACIG00000009331	cpsf2	57	96.040	ENSSARG00000009784	-	63	96.040	Sorex_araneus
ENSACIG00000009331	cpsf2	100	85.316	ENSSPUG00000013485	CPSF2	100	85.316	Sphenodon_punctatus
ENSACIG00000009331	cpsf2	100	96.574	ENSSPAG00000013284	cpsf2	100	96.574	Stegastes_partitus
ENSACIG00000009331	cpsf2	100	86.076	ENSSSCG00000002447	CPSF2	100	86.076	Sus_scrofa
ENSACIG00000009331	cpsf2	100	85.805	ENSTGUG00000012571	-	100	85.805	Taeniopygia_guttata
ENSACIG00000009331	cpsf2	100	93.274	ENSTRUG00000003742	cpsf2	100	93.274	Takifugu_rubripes
ENSACIG00000009331	cpsf2	100	93.038	ENSTNIG00000012228	cpsf2	100	93.038	Tetraodon_nigroviridis
ENSACIG00000009331	cpsf2	91	83.936	ENSTBEG00000004530	CPSF2	91	86.124	Tupaia_belangeri
ENSACIG00000009331	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSACIG00000009331	cpsf2	100	86.329	ENSUAMG00000028071	CPSF2	100	86.329	Ursus_americanus
ENSACIG00000009331	cpsf2	100	86.329	ENSUMAG00000005029	CPSF2	99	91.566	Ursus_maritimus
ENSACIG00000009331	cpsf2	99	86.185	ENSVPAG00000003503	CPSF2	100	86.185	Vicugna_pacos
ENSACIG00000009331	cpsf2	100	86.203	ENSVVUG00000024642	CPSF2	100	86.203	Vulpes_vulpes
ENSACIG00000009331	cpsf2	100	84.684	ENSXETG00000010289	cpsf2	100	84.684	Xenopus_tropicalis
ENSACIG00000009331	cpsf2	100	94.797	ENSXCOG00000001764	cpsf2	100	94.797	Xiphophorus_couchianus
ENSACIG00000009331	cpsf2	100	95.178	ENSXMAG00000017048	cpsf2	100	95.178	Xiphophorus_maculatus