EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000009475 (Gene tree)
Gene ID: -
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 247590 bases
Position: chrCCOE01000033.1:368666-616255
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012180	RRM_1	PF00076.22	9.5e-29	1	2
ENSACIP00000012180	RRM_1	PF00076.22	9.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012523	-	1134	-	ENSACIP00000012180	377 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000009475	msi2a	93	57.609	ENSACIG00000017754	-	73	68.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009475	msi2a	97	75.749	ENSG00000153944	MSI2	93	92.143	Homo_sapiens
ENSACIG00000009475	msi2a	100	90.511	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSACIG00000009475	msi2a	99	75.000	ENSAMEG00000002697	MSI2	100	75.000	Ailuropoda_melanoleuca
ENSACIG00000009475	msi2a	100	76.127	ENSAPEG00000007706	msi2a	100	81.633	Amphiprion_percula
ENSACIG00000009475	msi2a	100	90.511	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSACIG00000009475	msi2a	97	68.713	ENSATEG00000003301	-	100	68.713	Anabas_testudineus
ENSACIG00000009475	msi2a	94	81.356	ENSACAG00000005452	MSI2	88	81.356	Anolis_carolinensis
ENSACIG00000009475	msi2a	100	67.857	ENSANAG00000037827	MSI2	89	87.500	Aotus_nancymaae
ENSACIG00000009475	msi2a	100	90.511	ENSACLG00000007752	msi2a	99	100.000	Astatotilapia_calliptera
ENSACIG00000009475	msi2a	100	89.059	ENSAMXG00000032796	msi2a	100	90.000	Astyanax_mexicanus
ENSACIG00000009475	msi2a	100	88.265	ENSAMXG00000010474	msi2b	100	95.582	Astyanax_mexicanus
ENSACIG00000009475	msi2a	81	86.000	ENSBTAG00000004406	MSI2	79	89.908	Bos_taurus
ENSACIG00000009475	msi2a	53	61.033	WBGene00003423	msi-1	71	58.929	Caenorhabditis_elegans
ENSACIG00000009475	msi2a	100	67.857	ENSCJAG00000013998	MSI2	89	87.500	Callithrix_jacchus
ENSACIG00000009475	msi2a	94	77.465	ENSCAFG00020025620	MSI2	72	89.862	Canis_lupus_dingo
ENSACIG00000009475	msi2a	100	66.582	ENSCHIG00000016580	MSI2	100	66.837	Capra_hircus
ENSACIG00000009475	msi2a	94	63.977	ENSCPOG00000034042	MSI2	99	64.553	Cavia_porcellus
ENSACIG00000009475	msi2a	100	67.857	ENSCCAG00000033927	MSI2	89	87.500	Cebus_capucinus
ENSACIG00000009475	msi2a	97	67.717	ENSCATG00000040879	MSI2	89	87.500	Cercocebus_atys
ENSACIG00000009475	msi2a	100	74.745	ENSCLAG00000014325	MSI2	100	74.745	Chinchilla_lanigera
ENSACIG00000009475	msi2a	100	67.857	ENSCSAG00000005633	MSI2	100	67.602	Chlorocebus_sabaeus
ENSACIG00000009475	msi2a	61	88.000	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSACIG00000009475	msi2a	100	79.028	ENSCPBG00000009942	MSI2	96	84.348	Chrysemys_picta_bellii
ENSACIG00000009475	msi2a	51	64.734	ENSCSAVG00000010397	-	66	65.347	Ciona_savignyi
ENSACIG00000009475	msi2a	97	75.749	ENSCANG00000036414	MSI2	89	87.500	Colobus_angolensis_palliatus
ENSACIG00000009475	msi2a	100	70.663	ENSCGRG00001013330	Msi2	100	70.663	Cricetulus_griseus_chok1gshd
ENSACIG00000009475	msi2a	99	74.799	ENSCGRG00000003141	Msi2	98	74.799	Cricetulus_griseus_crigri
ENSACIG00000009475	msi2a	100	62.887	ENSCSEG00000003266	-	100	62.887	Cynoglossus_semilaevis
ENSACIG00000009475	msi2a	85	51.550	ENSCSEG00000013557	msi2a	83	51.550	Cynoglossus_semilaevis
ENSACIG00000009475	msi2a	100	94.643	ENSCVAG00000017075	msi2a	99	99.598	Cyprinodon_variegatus
ENSACIG00000009475	msi2a	100	84.949	ENSDARG00000033901	msi2a	100	84.949	Danio_rerio
ENSACIG00000009475	msi2a	100	83.495	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSACIG00000009475	msi2a	94	69.602	ENSDNOG00000014501	MSI2	100	69.318	Dasypus_novemcinctus
ENSACIG00000009475	msi2a	58	89.062	ENSDORG00000005394	Msi2	84	89.062	Dipodomys_ordii
ENSACIG00000009475	msi2a	97	51.194	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSACIG00000009475	msi2a	58	71.711	ENSETEG00000012450	-	64	71.711	Echinops_telfairi
ENSACIG00000009475	msi2a	94	56.461	ENSEBUG00000006732	msi2a	87	56.461	Eptatretus_burgeri
ENSACIG00000009475	msi2a	94	78.299	ENSEASG00005002965	MSI2	96	74.474	Equus_asinus_asinus
ENSACIG00000009475	msi2a	83	88.000	ENSECAG00000011435	MSI2	87	88.000	Equus_caballus
ENSACIG00000009475	msi2a	69	85.714	ENSEEUG00000007810	MSI2	81	77.723	Erinaceus_europaeus
ENSACIG00000009475	msi2a	100	87.218	ENSELUG00000001361	msi2b	100	87.218	Esox_lucius
ENSACIG00000009475	msi2a	97	90.489	ENSELUG00000011747	msi2a	97	91.033	Esox_lucius
ENSACIG00000009475	msi2a	100	67.857	ENSFCAG00000041686	MSI2	89	87.500	Felis_catus
ENSACIG00000009475	msi2a	97	75.749	ENSFDAG00000016118	MSI2	100	75.749	Fukomys_damarensis
ENSACIG00000009475	msi2a	100	90.024	ENSFHEG00000000084	msi2a	100	90.933	Fundulus_heteroclitus
ENSACIG00000009475	msi2a	100	73.980	ENSGALG00000005567	MSI2	100	73.980	Gallus_gallus
ENSACIG00000009475	msi2a	79	98.000	ENSGAFG00000006974	msi2a	90	90.066	Gambusia_affinis
ENSACIG00000009475	msi2a	100	81.127	ENSGAGG00000016542	MSI2	100	81.373	Gopherus_agassizii
ENSACIG00000009475	msi2a	97	75.749	ENSGGOG00000013182	MSI2	89	87.500	Gorilla_gorilla
ENSACIG00000009475	msi2a	100	90.511	ENSHBUG00000020800	msi2a	99	100.000	Haplochromis_burtoni
ENSACIG00000009475	msi2a	100	66.837	ENSHGLG00000012444	MSI2	100	66.837	Heterocephalus_glaber_female
ENSACIG00000009475	msi2a	82	70.356	ENSHGLG00100003744	MSI2	100	70.356	Heterocephalus_glaber_male
ENSACIG00000009475	msi2a	96	70.352	ENSHCOG00000017241	-	98	69.521	Hippocampus_comes
ENSACIG00000009475	msi2a	100	88.808	ENSHCOG00000000266	msi2a	100	88.808	Hippocampus_comes
ENSACIG00000009475	msi2a	100	82.683	ENSIPUG00000021097	msi2a	99	88.477	Ictalurus_punctatus
ENSACIG00000009475	msi2a	100	87.755	ENSIPUG00000003732	msi2b	100	87.755	Ictalurus_punctatus
ENSACIG00000009475	msi2a	94	63.977	ENSSTOG00000007884	MSI2	99	64.553	Ictidomys_tridecemlineatus
ENSACIG00000009475	msi2a	82	62.846	ENSJJAG00000006292	-	100	62.846	Jaculus_jaculus
ENSACIG00000009475	msi2a	100	98.674	ENSKMAG00000009494	msi2a	100	98.674	Kryptolebias_marmoratus
ENSACIG00000009475	msi2a	97	77.233	ENSLBEG00000026223	-	100	77.233	Labrus_bergylta
ENSACIG00000009475	msi2a	100	90.511	ENSLBEG00000007061	msi2a	100	90.511	Labrus_bergylta
ENSACIG00000009475	msi2a	100	89.541	ENSLOCG00000004675	msi2b	100	89.541	Lepisosteus_oculatus
ENSACIG00000009475	msi2a	97	75.749	ENSMFAG00000003775	MSI2	89	87.500	Macaca_fascicularis
ENSACIG00000009475	msi2a	97	75.749	ENSMMUG00000002069	MSI2	89	87.500	Macaca_mulatta
ENSACIG00000009475	msi2a	100	67.857	ENSMNEG00000045275	MSI2	89	87.500	Macaca_nemestrina
ENSACIG00000009475	msi2a	97	75.749	ENSMLEG00000033888	MSI2	89	87.500	Mandrillus_leucophaeus
ENSACIG00000009475	msi2a	100	90.291	ENSMAMG00000010503	msi2a	100	100.000	Mastacembelus_armatus
ENSACIG00000009475	msi2a	100	78.469	ENSMAMG00000002488	-	95	94.378	Mastacembelus_armatus
ENSACIG00000009475	msi2a	100	90.511	ENSMZEG00005007676	msi2a	95	100.000	Maylandia_zebra
ENSACIG00000009475	msi2a	100	74.300	ENSMAUG00000003862	Msi2	100	74.300	Mesocricetus_auratus
ENSACIG00000009475	msi2a	77	86.885	ENSMICG00000032913	-	100	54.040	Microcebus_murinus
ENSACIG00000009475	msi2a	100	67.857	ENSMICG00000013598	-	89	87.500	Microcebus_murinus
ENSACIG00000009475	msi2a	100	74.490	ENSMOCG00000005820	Msi2	100	74.490	Microtus_ochrogaster
ENSACIG00000009475	msi2a	72	98.113	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSACIG00000009475	msi2a	82	69.960	ENSMODG00000014790	MSI2	100	69.960	Monodelphis_domestica
ENSACIG00000009475	msi2a	100	89.542	ENSMALG00000000071	msi2a	99	100.000	Monopterus_albus
ENSACIG00000009475	msi2a	100	74.490	MGP_CAROLIEiJ_G0016948	Msi2	100	88.182	Mus_caroli
ENSACIG00000009475	msi2a	100	74.490	ENSMUSG00000069769	Msi2	100	88.182	Mus_musculus
ENSACIG00000009475	msi2a	100	74.490	MGP_PahariEiJ_G0018079	Msi2	100	88.182	Mus_pahari
ENSACIG00000009475	msi2a	100	74.490	MGP_SPRETEiJ_G0017795	Msi2	100	88.182	Mus_spretus
ENSACIG00000009475	msi2a	99	67.473	ENSMPUG00000015377	MSI2	95	67.473	Mustela_putorius_furo
ENSACIG00000009475	msi2a	99	67.473	ENSMLUG00000007865	MSI2	95	67.473	Myotis_lucifugus
ENSACIG00000009475	msi2a	100	74.490	ENSNGAG00000017807	Msi2	100	74.490	Nannospalax_galili
ENSACIG00000009475	msi2a	100	94.898	ENSNBRG00000014596	msi2a	100	94.898	Neolamprologus_brichardi
ENSACIG00000009475	msi2a	94	77.528	ENSNLEG00000008059	MSI2	95	92.788	Nomascus_leucogenys
ENSACIG00000009475	msi2a	57	82.895	ENSOPRG00000000872	-	64	82.895	Ochotona_princeps
ENSACIG00000009475	msi2a	100	74.745	ENSODEG00000011974	MSI2	100	74.745	Octodon_degus
ENSACIG00000009475	msi2a	97	71.990	ENSOANG00000005667	MSI2	97	74.693	Ornithorhynchus_anatinus
ENSACIG00000009475	msi2a	99	67.473	ENSOCUG00000010440	MSI2	95	67.473	Oryctolagus_cuniculus
ENSACIG00000009475	msi2a	100	94.643	ENSORLG00000009671	msi2a	95	100.000	Oryzias_latipes
ENSACIG00000009475	msi2a	100	90.268	ENSORLG00020021556	msi2a	99	100.000	Oryzias_latipes_hni
ENSACIG00000009475	msi2a	100	94.643	ENSORLG00015004592	msi2a	95	100.000	Oryzias_latipes_hsok
ENSACIG00000009475	msi2a	100	94.643	ENSOMEG00000000146	msi2a	99	100.000	Oryzias_melastigma
ENSACIG00000009475	msi2a	99	64.516	ENSOGAG00000005621	MSI2	100	64.516	Otolemur_garnettii
ENSACIG00000009475	msi2a	97	75.749	ENSPPAG00000037697	MSI2	89	87.500	Pan_paniscus
ENSACIG00000009475	msi2a	97	68.392	ENSPPRG00000001848	MSI2	89	87.500	Panthera_pardus
ENSACIG00000009475	msi2a	94	77.528	ENSPTIG00000021678	MSI2	83	92.788	Panthera_tigris_altaica
ENSACIG00000009475	msi2a	59	74.026	ENSPTIG00000021873	-	90	74.026	Panthera_tigris_altaica
ENSACIG00000009475	msi2a	97	75.749	ENSPTRG00000009437	MSI2	89	87.500	Pan_troglodytes
ENSACIG00000009475	msi2a	100	67.857	ENSPANG00000022319	MSI2	89	87.500	Papio_anubis
ENSACIG00000009475	msi2a	100	77.551	ENSPKIG00000007038	-	96	86.420	Paramormyrops_kingsleyae
ENSACIG00000009475	msi2a	100	82.512	ENSPSIG00000008618	MSI2	100	82.512	Pelodiscus_sinensis
ENSACIG00000009475	msi2a	100	75.862	ENSPMGG00000005888	msi2a	100	75.862	Periophthalmus_magnuspinnatus
ENSACIG00000009475	msi2a	96	76.517	ENSPCIG00000006063	MSI2	100	73.500	Phascolarctos_cinereus
ENSACIG00000009475	msi2a	100	90.268	ENSPREG00000000881	msi2a	100	90.268	Poecilia_reticulata
ENSACIG00000009475	msi2a	94	63.245	ENSPPYG00000008244	-	100	62.914	Pongo_abelii
ENSACIG00000009475	msi2a	75	89.062	ENSPCAG00000010552	MSI2	100	46.512	Procavia_capensis
ENSACIG00000009475	msi2a	65	95.028	ENSPVAG00000017053	MSI2	99	87.500	Pteropus_vampyrus
ENSACIG00000009475	msi2a	100	90.511	ENSPNYG00000018393	msi2a	99	100.000	Pundamilia_nyererei
ENSACIG00000009475	msi2a	100	89.567	ENSPNAG00000014957	msi2a	100	94.800	Pygocentrus_nattereri
ENSACIG00000009475	msi2a	100	88.041	ENSPNAG00000000844	msi2b	100	95.200	Pygocentrus_nattereri
ENSACIG00000009475	msi2a	94	68.713	ENSRNOG00000025338	Msi2	100	68.421	Rattus_norvegicus
ENSACIG00000009475	msi2a	97	75.749	ENSSBOG00000026425	MSI2	89	87.500	Saimiri_boliviensis_boliviensis
ENSACIG00000009475	msi2a	97	75.749	ENSSHAG00000008672	MSI2	100	75.749	Sarcophilus_harrisii
ENSACIG00000009475	msi2a	99	67.204	ENSSFOG00015021687	-	97	87.892	Scleropages_formosus
ENSACIG00000009475	msi2a	100	71.852	ENSSFOG00015012168	msi2b	100	71.852	Scleropages_formosus
ENSACIG00000009475	msi2a	100	90.268	ENSSMAG00000018484	msi2a	99	100.000	Scophthalmus_maximus
ENSACIG00000009475	msi2a	100	90.511	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSACIG00000009475	msi2a	82	87.645	ENSSDUG00000021968	-	99	84.106	Seriola_dumerili
ENSACIG00000009475	msi2a	100	90.511	ENSSLDG00000017172	msi2a	95	100.000	Seriola_lalandi_dorsalis
ENSACIG00000009475	msi2a	100	90.511	ENSSPAG00000017793	msi2a	97	100.000	Stegastes_partitus
ENSACIG00000009475	msi2a	99	75.000	ENSSSCG00000038505	MSI2	95	88.000	Sus_scrofa
ENSACIG00000009475	msi2a	82	70.356	ENSTGUG00000008452	MSI2	100	70.356	Taeniopygia_guttata
ENSACIG00000009475	msi2a	97	88.693	ENSTRUG00000021248	msi2a	95	88.693	Takifugu_rubripes
ENSACIG00000009475	msi2a	60	73.529	ENSTBEG00000001241	MSI2	73	73.529	Tupaia_belangeri
ENSACIG00000009475	msi2a	72	94.079	ENSTTRG00000002189	MSI2	91	94.079	Tursiops_truncatus
ENSACIG00000009475	msi2a	90	89.062	ENSUAMG00000000700	MSI2	95	89.062	Ursus_americanus
ENSACIG00000009475	msi2a	78	88.000	ENSUMAG00000000505	MSI2	95	88.000	Ursus_maritimus
ENSACIG00000009475	msi2a	100	74.745	ENSVVUG00000011783	MSI2	100	74.745	Vulpes_vulpes
ENSACIG00000009475	msi2a	99	96.277	ENSXCOG00000006113	msi2a	98	96.277	Xiphophorus_couchianus
ENSACIG00000009475	msi2a	100	90.024	ENSXMAG00000000608	msi2a	99	98.413	Xiphophorus_maculatus