EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009604 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 64146 bases
Position: chrCCOE01000287.1:4468144-4532289
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	1	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	2	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	3	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	4	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	5	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	6	7
ENSACIP00000012395	PPR	PF01535.20	1.9e-38	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012743	-	4029	-	ENSACIP00000012395	1342 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009604	lrpprc	99	73.931	ENSAPOG00000016610	lrpprc	100	73.931	Acanthochromis_polyacanthus
ENSACIG00000009604	lrpprc	96	50.803	ENSAMEG00000005852	LRPPRC	99	50.803	Ailuropoda_melanoleuca
ENSACIG00000009604	lrpprc	99	74.685	ENSAOCG00000005886	lrpprc	100	74.685	Amphiprion_ocellaris
ENSACIG00000009604	lrpprc	99	72.881	ENSAPEG00000002937	lrpprc	99	72.881	Amphiprion_percula
ENSACIG00000009604	lrpprc	99	61.029	ENSATEG00000010555	lrpprc	95	75.899	Anabas_testudineus
ENSACIG00000009604	lrpprc	94	54.028	ENSACAG00000029278	LRPPRC	100	52.424	Anolis_carolinensis
ENSACIG00000009604	lrpprc	99	49.155	ENSANAG00000027440	LRPPRC	97	56.691	Aotus_nancymaae
ENSACIG00000009604	lrpprc	95	80.091	ENSACLG00000023712	lrpprc	92	89.006	Astatotilapia_calliptera
ENSACIG00000009604	lrpprc	95	49.596	ENSCJAG00000000794	LRPPRC	90	60.125	Callithrix_jacchus
ENSACIG00000009604	lrpprc	96	51.026	ENSCHIG00000020173	LRPPRC	99	51.111	Capra_hircus
ENSACIG00000009604	lrpprc	92	43.235	ENSCAPG00000013631	LRPPRC	97	43.235	Cavia_aperea
ENSACIG00000009604	lrpprc	84	48.216	ENSCPOG00000000204	LRPPRC	99	48.216	Cavia_porcellus
ENSACIG00000009604	lrpprc	99	49.259	ENSCCAG00000031900	LRPPRC	97	57.063	Cebus_capucinus
ENSACIG00000009604	lrpprc	99	49.400	ENSCATG00000014187	LRPPRC	98	56.215	Cercocebus_atys
ENSACIG00000009604	lrpprc	99	47.989	ENSCLAG00000005203	LRPPRC	99	47.989	Chinchilla_lanigera
ENSACIG00000009604	lrpprc	95	50.364	ENSCSAG00000013233	LRPPRC	100	49.578	Chlorocebus_sabaeus
ENSACIG00000009604	lrpprc	84	49.329	ENSCHOG00000003631	LRPPRC	84	49.329	Choloepus_hoffmanni
ENSACIG00000009604	lrpprc	94	48.657	ENSCANG00000034961	LRPPRC	99	58.689	Colobus_angolensis_palliatus
ENSACIG00000009604	lrpprc	99	48.547	ENSCGRG00001016261	Lrpprc	99	48.689	Cricetulus_griseus_chok1gshd
ENSACIG00000009604	lrpprc	99	48.547	ENSCGRG00000004072	Lrpprc	99	48.689	Cricetulus_griseus_crigri
ENSACIG00000009604	lrpprc	99	53.757	ENSCSEG00000003850	lrpprc	96	59.961	Cynoglossus_semilaevis
ENSACIG00000009604	lrpprc	99	74.332	ENSCVAG00000012967	lrpprc	100	74.332	Cyprinodon_variegatus
ENSACIG00000009604	lrpprc	99	56.172	ENSDARG00000043970	lrpprc	99	56.172	Danio_rerio
ENSACIG00000009604	lrpprc	99	49.433	ENSDNOG00000012594	-	99	49.433	Dasypus_novemcinctus
ENSACIG00000009604	lrpprc	78	40.721	ENSDNOG00000032336	-	97	40.721	Dasypus_novemcinctus
ENSACIG00000009604	lrpprc	97	50.468	ENSDORG00000012233	Lrpprc	99	50.324	Dipodomys_ordii
ENSACIG00000009604	lrpprc	94	50.784	ENSETEG00000006657	LRPPRC	99	49.610	Echinops_telfairi
ENSACIG00000009604	lrpprc	74	55.231	ENSEEUG00000012340	LRPPRC	79	55.231	Erinaceus_europaeus
ENSACIG00000009604	lrpprc	94	61.253	ENSELUG00000012803	lrpprc	99	61.253	Esox_lucius
ENSACIG00000009604	lrpprc	99	50.779	ENSFCAG00000013468	LRPPRC	99	51.238	Felis_catus
ENSACIG00000009604	lrpprc	93	47.885	ENSFALG00000012738	LRPPRC	99	47.885	Ficedula_albicollis
ENSACIG00000009604	lrpprc	99	47.848	ENSFDAG00000015328	LRPPRC	99	47.848	Fukomys_damarensis
ENSACIG00000009604	lrpprc	99	73.366	ENSFHEG00000019604	lrpprc	100	73.366	Fundulus_heteroclitus
ENSACIG00000009604	lrpprc	99	62.617	ENSGMOG00000008337	lrpprc	99	62.617	Gadus_morhua
ENSACIG00000009604	lrpprc	99	71.036	ENSGAFG00000001455	lrpprc	100	71.036	Gambusia_affinis
ENSACIG00000009604	lrpprc	99	70.763	ENSGACG00000010679	lrpprc	99	71.566	Gasterosteus_aculeatus
ENSACIG00000009604	lrpprc	100	83.508	ENSHBUG00000000393	lrpprc	98	83.508	Haplochromis_burtoni
ENSACIG00000009604	lrpprc	99	47.917	ENSHGLG00000006123	LRPPRC	99	47.917	Heterocephalus_glaber_female
ENSACIG00000009604	lrpprc	56	45.241	ENSHGLG00100005960	-	97	45.241	Heterocephalus_glaber_male
ENSACIG00000009604	lrpprc	97	69.326	ENSHCOG00000002107	lrpprc	100	69.326	Hippocampus_comes
ENSACIG00000009604	lrpprc	99	60.724	ENSIPUG00000009406	lrpprc	99	60.724	Ictalurus_punctatus
ENSACIG00000009604	lrpprc	99	48.939	ENSSTOG00000011185	LRPPRC	99	49.117	Ictidomys_tridecemlineatus
ENSACIG00000009604	lrpprc	95	49.304	ENSJJAG00000020475	Lrpprc	99	48.882	Jaculus_jaculus
ENSACIG00000009604	lrpprc	98	61.823	ENSKMAG00000003287	lrpprc	85	61.823	Kryptolebias_marmoratus
ENSACIG00000009604	lrpprc	99	62.781	ENSLBEG00000023225	lrpprc	96	73.346	Labrus_bergylta
ENSACIG00000009604	lrpprc	99	54.888	ENSLACG00000014030	LRPPRC	99	54.888	Latimeria_chalumnae
ENSACIG00000009604	lrpprc	98	59.171	ENSLOCG00000016390	lrpprc	97	59.171	Lepisosteus_oculatus
ENSACIG00000009604	lrpprc	99	47.001	ENSLAFG00000008614	LRPPRC	99	47.001	Loxodonta_africana
ENSACIG00000009604	lrpprc	95	49.782	ENSMFAG00000041560	LRPPRC	99	58.553	Macaca_fascicularis
ENSACIG00000009604	lrpprc	95	49.741	ENSMMUG00000019841	LRPPRC	99	58.553	Macaca_mulatta
ENSACIG00000009604	lrpprc	99	49.157	ENSMNEG00000031613	LRPPRC	98	56.215	Macaca_nemestrina
ENSACIG00000009604	lrpprc	97	68.178	ENSMAMG00000021835	lrpprc	98	68.363	Mastacembelus_armatus
ENSACIG00000009604	lrpprc	100	83.298	ENSMZEG00005027379	lrpprc	100	83.298	Maylandia_zebra
ENSACIG00000009604	lrpprc	99	48.582	ENSMAUG00000012118	Lrpprc	99	50.604	Mesocricetus_auratus
ENSACIG00000009604	lrpprc	99	49.965	ENSMICG00000010486	LRPPRC	97	56.134	Microcebus_murinus
ENSACIG00000009604	lrpprc	99	49.322	ENSMOCG00000006048	Lrpprc	99	49.322	Microtus_ochrogaster
ENSACIG00000009604	lrpprc	99	71.686	ENSMMOG00000007830	lrpprc	94	79.061	Mola_mola
ENSACIG00000009604	lrpprc	93	50.075	ENSMODG00000000648	LRPPRC	99	50.075	Monodelphis_domestica
ENSACIG00000009604	lrpprc	100	69.118	ENSMALG00000001271	lrpprc	100	69.118	Monopterus_albus
ENSACIG00000009604	lrpprc	94	50.885	ENSMPUG00000011800	LRPPRC	99	52.063	Mustela_putorius_furo
ENSACIG00000009604	lrpprc	99	49.574	ENSMLUG00000010575	LRPPRC	99	49.645	Myotis_lucifugus
ENSACIG00000009604	lrpprc	99	48.860	ENSNGAG00000013069	Lrpprc	99	48.932	Nannospalax_galili
ENSACIG00000009604	lrpprc	93	77.527	ENSNBRG00000013202	lrpprc	100	78.264	Neolamprologus_brichardi
ENSACIG00000009604	lrpprc	99	49.393	ENSNLEG00000016782	LRPPRC	99	55.415	Nomascus_leucogenys
ENSACIG00000009604	lrpprc	87	47.222	ENSOPRG00000016774	LRPPRC	91	43.729	Ochotona_princeps
ENSACIG00000009604	lrpprc	99	48.862	ENSODEG00000011211	LRPPRC	99	48.791	Octodon_degus
ENSACIG00000009604	lrpprc	100	83.718	ENSONIG00000000917	lrpprc	100	82.320	Oreochromis_niloticus
ENSACIG00000009604	lrpprc	73	44.863	ENSOANG00000014670	-	100	44.661	Ornithorhynchus_anatinus
ENSACIG00000009604	lrpprc	99	49.753	ENSOCUG00000015046	LRPPRC	96	49.753	Oryctolagus_cuniculus
ENSACIG00000009604	lrpprc	100	70.701	ENSORLG00000004605	lrpprc	99	69.565	Oryzias_latipes
ENSACIG00000009604	lrpprc	90	71.880	ENSORLG00020012536	lrpprc	99	71.508	Oryzias_latipes_hni
ENSACIG00000009604	lrpprc	99	69.834	ENSORLG00015018270	lrpprc	92	78.373	Oryzias_latipes_hsok
ENSACIG00000009604	lrpprc	94	50.593	ENSOGAG00000012798	LRPPRC	99	49.646	Otolemur_garnettii
ENSACIG00000009604	lrpprc	94	51.481	ENSOARG00000006522	LRPPRC	99	50.283	Ovis_aries
ENSACIG00000009604	lrpprc	95	48.496	ENSPPAG00000040876	LRPPRC	97	55.970	Pan_paniscus
ENSACIG00000009604	lrpprc	95	51.920	ENSPPRG00000006578	LRPPRC	99	51.097	Panthera_pardus
ENSACIG00000009604	lrpprc	94	52.106	ENSPTIG00000000933	LRPPRC	97	52.106	Panthera_tigris_altaica
ENSACIG00000009604	lrpprc	99	48.906	ENSPTRG00000011880	LRPPRC	97	55.680	Pan_troglodytes
ENSACIG00000009604	lrpprc	99	49.228	ENSPANG00000020731	LRPPRC	98	56.111	Papio_anubis
ENSACIG00000009604	lrpprc	89	49.895	ENSPKIG00000022232	lrpprc	97	57.558	Paramormyrops_kingsleyae
ENSACIG00000009604	lrpprc	58	50.289	ENSPSIG00000006830	-	99	50.520	Pelodiscus_sinensis
ENSACIG00000009604	lrpprc	64	63.447	ENSPMGG00000016597	lrpprc	97	63.447	Periophthalmus_magnuspinnatus
ENSACIG00000009604	lrpprc	92	44.251	ENSPMAG00000002147	lrpprc	100	44.251	Petromyzon_marinus
ENSACIG00000009604	lrpprc	99	70.341	ENSPFOG00000011227	lrpprc	99	70.341	Poecilia_formosa
ENSACIG00000009604	lrpprc	99	70.270	ENSPLAG00000004018	lrpprc	99	70.270	Poecilia_latipinna
ENSACIG00000009604	lrpprc	99	70.270	ENSPMEG00000016425	lrpprc	99	70.270	Poecilia_mexicana
ENSACIG00000009604	lrpprc	99	70.349	ENSPREG00000003662	lrpprc	99	70.349	Poecilia_reticulata
ENSACIG00000009604	lrpprc	55	45.455	ENSPPYG00000029532	-	100	45.455	Pongo_abelii
ENSACIG00000009604	lrpprc	73	55.866	ENSPCAG00000001430	LRPPRC	72	55.861	Procavia_capensis
ENSACIG00000009604	lrpprc	99	48.300	ENSPVAG00000002007	LRPPRC	99	48.300	Pteropus_vampyrus
ENSACIG00000009604	lrpprc	99	76.688	ENSPNYG00000000756	lrpprc	100	76.688	Pundamilia_nyererei
ENSACIG00000009604	lrpprc	99	62.177	ENSPNAG00000002895	lrpprc	99	62.177	Pygocentrus_nattereri
ENSACIG00000009604	lrpprc	94	49.440	ENSRNOG00000005877	Lrpprc	99	48.269	Rattus_norvegicus
ENSACIG00000009604	lrpprc	99	48.034	ENSRBIG00000031552	LRPPRC	100	47.963	Rhinopithecus_bieti
ENSACIG00000009604	lrpprc	99	48.977	ENSSBOG00000011807	LRPPRC	97	56.320	Saimiri_boliviensis_boliviensis
ENSACIG00000009604	lrpprc	93	49.775	ENSSHAG00000018725	LRPPRC	99	49.775	Sarcophilus_harrisii
ENSACIG00000009604	lrpprc	99	53.214	ENSSFOG00015001042	lrpprc	99	53.214	Scleropages_formosus
ENSACIG00000009604	lrpprc	100	70.970	ENSSDUG00000019062	lrpprc	100	70.970	Seriola_dumerili
ENSACIG00000009604	lrpprc	99	56.888	ENSSLDG00000023028	lrpprc	100	62.582	Seriola_lalandi_dorsalis
ENSACIG00000009604	lrpprc	85	49.501	ENSSARG00000000426	LRPPRC	99	49.501	Sorex_araneus
ENSACIG00000009604	lrpprc	99	64.449	ENSSPAG00000000162	lrpprc	100	64.449	Stegastes_partitus
ENSACIG00000009604	lrpprc	99	50.287	ENSSSCG00000008452	LRPPRC	99	50.287	Sus_scrofa
ENSACIG00000009604	lrpprc	92	47.368	ENSTGUG00000003759	LRPPRC	100	47.368	Taeniopygia_guttata
ENSACIG00000009604	lrpprc	92	69.130	ENSTRUG00000008409	lrpprc	97	69.130	Takifugu_rubripes
ENSACIG00000009604	lrpprc	99	67.045	ENSTNIG00000007470	lrpprc	99	67.383	Tetraodon_nigroviridis
ENSACIG00000009604	lrpprc	94	49.925	ENSTTRG00000006403	LRPPRC	99	48.513	Tursiops_truncatus
ENSACIG00000009604	lrpprc	94	48.242	ENSVPAG00000008993	LRPPRC	99	48.242	Vicugna_pacos
ENSACIG00000009604	lrpprc	94	54.667	ENSXETG00000009296	lrpprc	97	54.593	Xenopus_tropicalis
ENSACIG00000009604	lrpprc	98	67.634	ENSXCOG00000013343	lrpprc	95	71.680	Xiphophorus_couchianus
ENSACIG00000009604	lrpprc	99	70.049	ENSXMAG00000018108	lrpprc	100	70.049	Xiphophorus_maculatus