EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000009747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 8643 bases
Position: chrCCOE01000334.1:4423648-4432290
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012499	zf-C2H2	PF00096.26	3.3e-14	1	3
ENSACIP00000012499	zf-C2H2	PF00096.26	3.3e-14	2	3
ENSACIP00000012499	zf-C2H2	PF00096.26	3.3e-14	3	3
ENSACIP00000012499	zf-met	PF12874.7	8.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012850	-	2349	-	ENSACIP00000012499	782 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000009747	-	78	37.054	ENSACIG00000014426	prdm1b	56	67.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009747	-	100	78.289	ENSAPOG00000014135	-	100	78.289	Acanthochromis_polyacanthus
ENSACIG00000009747	-	56	58.282	ENSAPEG00000019826	prdm1b	93	35.762	Amphiprion_percula
ENSACIG00000009747	-	94	45.912	ENSATEG00000021017	prdm1a	98	45.844	Anabas_testudineus
ENSACIG00000009747	-	98	72.927	ENSATEG00000014034	-	99	72.927	Anabas_testudineus
ENSACIG00000009747	-	50	61.379	WBGene00003847	blmp-1	52	61.379	Caenorhabditis_elegans
ENSACIG00000009747	-	99	41.778	ENSCSEG00000009707	prdm1a	99	44.431	Cynoglossus_semilaevis
ENSACIG00000009747	-	57	57.055	ENSCVAG00000016746	prdm1b	92	34.464	Cyprinodon_variegatus
ENSACIG00000009747	-	99	42.726	ENSCVAG00000019081	prdm1a	98	45.455	Cyprinodon_variegatus
ENSACIG00000009747	-	91	39.295	ENSGAFG00000016191	prdm1b	56	62.121	Gambusia_affinis
ENSACIG00000009747	-	99	68.702	ENSGAFG00000013012	-	99	68.880	Gambusia_affinis
ENSACIG00000009747	-	54	56.707	ENSGACG00000002716	prdm1b	61	56.707	Gasterosteus_aculeatus
ENSACIG00000009747	-	52	54.118	ENSIPUG00000013740	prdm1b	60	54.118	Ictalurus_punctatus
ENSACIG00000009747	-	99	70.865	ENSKMAG00000016247	-	99	70.865	Kryptolebias_marmoratus
ENSACIG00000009747	-	87	45.063	ENSKMAG00000017597	prdm1a	87	45.442	Kryptolebias_marmoratus
ENSACIG00000009747	-	64	51.515	ENSLBEG00000020955	prdm1b	64	58.025	Labrus_bergylta
ENSACIG00000009747	-	68	51.803	ENSLOCG00000004978	prdm1b	67	51.803	Lepisosteus_oculatus
ENSACIG00000009747	-	79	36.547	ENSMMOG00000013458	prdm1b	94	36.037	Mola_mola
ENSACIG00000009747	-	81	35.532	ENSMALG00000011410	prdm1b	62	61.972	Monopterus_albus
ENSACIG00000009747	-	98	73.800	ENSMALG00000000462	-	99	73.800	Monopterus_albus
ENSACIG00000009747	-	100	87.134	ENSONIG00000014709	-	100	87.134	Oreochromis_niloticus
ENSACIG00000009747	-	53	59.509	ENSONIG00000013583	prdm1b	59	59.509	Oreochromis_niloticus
ENSACIG00000009747	-	91	39.252	ENSPREG00000011327	prdm1b	56	60.563	Poecilia_reticulata
ENSACIG00000009747	-	93	42.717	ENSPVAG00000011732	PRDM1	96	42.787	Pteropus_vampyrus
ENSACIG00000009747	-	93	44.845	ENSPNAG00000028442	prdm1a	92	46.917	Pygocentrus_nattereri
ENSACIG00000009747	-	61	53.293	ENSSFOG00015021896	prdm1b	70	53.293	Scleropages_formosus
ENSACIG00000009747	-	100	72.785	ENSSMAG00000017518	-	100	72.785	Scophthalmus_maximus
ENSACIG00000009747	-	57	57.055	ENSSMAG00000020467	prdm1b	55	71.429	Scophthalmus_maximus
ENSACIG00000009747	-	100	77.722	ENSSDUG00000000524	-	100	77.722	Seriola_dumerili
ENSACIG00000009747	-	79	37.249	ENSSDUG00000020610	prdm1b	56	64.286	Seriola_dumerili
ENSACIG00000009747	-	79	37.481	ENSSLDG00000021973	prdm1b	58	64.286	Seriola_lalandi_dorsalis
ENSACIG00000009747	-	100	77.722	ENSSLDG00000001957	-	100	77.722	Seriola_lalandi_dorsalis
ENSACIG00000009747	-	100	77.707	ENSSPAG00000009830	-	100	77.707	Stegastes_partitus
ENSACIG00000009747	-	73	57.377	ENSSPAG00000000803	prdm1b	93	35.413	Stegastes_partitus
ENSACIG00000009747	-	91	38.995	ENSXMAG00000016765	prdm1b	59	62.500	Xiphophorus_maculatus