EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009786 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5833 bases
Position: chrCCOE01001678.1:694986-700818
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012560	CPL	PF08144.11	3.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000012913	-	1737	-	ENSACIP00000012560	578 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009786	pum3	88	57.656	ENSG00000080608	PUM3	98	54.167	Homo_sapiens
ENSACIG00000009786	pum3	94	78.723	ENSAPOG00000020252	pum3	86	78.723	Acanthochromis_polyacanthus
ENSACIG00000009786	pum3	88	57.008	ENSAMEG00000012187	PUM3	86	56.071	Ailuropoda_melanoleuca
ENSACIG00000009786	pum3	94	78.546	ENSAOCG00000004439	pum3	86	78.546	Amphiprion_ocellaris
ENSACIG00000009786	pum3	94	78.546	ENSAPEG00000020523	pum3	86	78.546	Amphiprion_percula
ENSACIG00000009786	pum3	96	78.374	ENSATEG00000005799	pum3	89	78.893	Anabas_testudineus
ENSACIG00000009786	pum3	88	57.815	ENSAPLG00000002920	PUM3	86	57.649	Anas_platyrhynchos
ENSACIG00000009786	pum3	80	58.642	ENSACAG00000003174	PUM3	86	57.977	Anolis_carolinensis
ENSACIG00000009786	pum3	88	57.656	ENSANAG00000024520	PUM3	86	56.506	Aotus_nancymaae
ENSACIG00000009786	pum3	97	86.034	ENSACLG00000001017	pum3	89	86.034	Astatotilapia_calliptera
ENSACIG00000009786	pum3	89	64.299	ENSAMXG00000020911	pum3	85	64.486	Astyanax_mexicanus
ENSACIG00000009786	pum3	88	57.331	ENSBTAG00000013357	PUM3	86	55.793	Bos_taurus
ENSACIG00000009786	pum3	88	57.278	ENSCJAG00000010917	PUM3	86	56.150	Callithrix_jacchus
ENSACIG00000009786	pum3	88	56.629	ENSCAFG00000002035	PUM3	86	55.536	Canis_familiaris
ENSACIG00000009786	pum3	88	56.629	ENSCAFG00020026867	PUM3	86	55.536	Canis_lupus_dingo
ENSACIG00000009786	pum3	88	57.707	ENSCHIG00000021559	PUM3	86	56.150	Capra_hircus
ENSACIG00000009786	pum3	88	56.767	ENSTSYG00000007481	PUM3	86	55.258	Carlito_syrichta
ENSACIG00000009786	pum3	86	56.069	ENSCAPG00000010592	-	86	54.383	Cavia_aperea
ENSACIG00000009786	pum3	93	55.258	ENSCPOG00000008552	-	86	55.258	Cavia_porcellus
ENSACIG00000009786	pum3	88	57.467	ENSCCAG00000032650	PUM3	86	56.328	Cebus_capucinus
ENSACIG00000009786	pum3	93	56.506	ENSCATG00000024880	PUM3	86	56.506	Cercocebus_atys
ENSACIG00000009786	pum3	88	57.467	ENSCLAG00000011892	PUM3	86	56.328	Chinchilla_lanigera
ENSACIG00000009786	pum3	81	61.996	ENSCSAG00000008691	PUM3	86	55.793	Chlorocebus_sabaeus
ENSACIG00000009786	pum3	72	56.667	ENSCHOG00000002535	PUM3	62	56.667	Choloepus_hoffmanni
ENSACIG00000009786	pum3	86	58.269	ENSCPBG00000025470	PUM3	82	56.962	Chrysemys_picta_bellii
ENSACIG00000009786	pum3	88	36.735	ENSCING00000024199	-	95	36.735	Ciona_intestinalis
ENSACIG00000009786	pum3	90	36.738	ENSCSAVG00000006072	-	99	36.692	Ciona_savignyi
ENSACIG00000009786	pum3	88	57.467	ENSCANG00000006142	PUM3	86	56.328	Colobus_angolensis_palliatus
ENSACIG00000009786	pum3	88	56.711	ENSCGRG00001016402	Pum3	86	55.615	Cricetulus_griseus_chok1gshd
ENSACIG00000009786	pum3	88	56.711	ENSCGRG00000010207	Pum3	86	55.615	Cricetulus_griseus_crigri
ENSACIG00000009786	pum3	80	76.091	ENSCSEG00000001565	pum3	83	76.091	Cynoglossus_semilaevis
ENSACIG00000009786	pum3	65	74.170	ENSCVAG00000006550	pum3	87	74.170	Cyprinodon_variegatus
ENSACIG00000009786	pum3	96	61.446	ENSDARG00000087779	pum3	92	61.446	Danio_rerio
ENSACIG00000009786	pum3	88	47.932	ENSDNOG00000008157	PUM3	58	48.188	Dasypus_novemcinctus
ENSACIG00000009786	pum3	88	56.818	ENSETEG00000015331	PUM3	82	56.903	Echinops_telfairi
ENSACIG00000009786	pum3	89	36.929	ENSEBUG00000011586	pum3	81	36.929	Eptatretus_burgeri
ENSACIG00000009786	pum3	86	58.349	ENSEASG00005010350	PUM3	86	56.506	Equus_asinus_asinus
ENSACIG00000009786	pum3	86	58.349	ENSECAG00000017193	PUM3	86	56.506	Equus_caballus
ENSACIG00000009786	pum3	79	51.046	ENSEEUG00000010314	PUM3	84	50.097	Erinaceus_europaeus
ENSACIG00000009786	pum3	97	61.197	ENSELUG00000002215	pum3	91	61.197	Esox_lucius
ENSACIG00000009786	pum3	92	56.058	ENSFALG00000010509	PUM3	85	56.058	Ficedula_albicollis
ENSACIG00000009786	pum3	88	57.386	ENSFDAG00000021027	PUM3	84	56.909	Fukomys_damarensis
ENSACIG00000009786	pum3	65	77.749	ENSFHEG00000015576	pum3	73	77.749	Fundulus_heteroclitus
ENSACIG00000009786	pum3	89	65.918	ENSGMOG00000014217	pum3	99	65.918	Gadus_morhua
ENSACIG00000009786	pum3	88	57.576	ENSGALG00000010178	PUM3	84	57.649	Gallus_gallus
ENSACIG00000009786	pum3	62	75.342	ENSGAFG00000001930	pum3	62	75.342	Gambusia_affinis
ENSACIG00000009786	pum3	91	77.289	ENSGACG00000017878	pum3	99	77.289	Gasterosteus_aculeatus
ENSACIG00000009786	pum3	96	52.419	ENSGAGG00000018983	PUM3	99	52.581	Gopherus_agassizii
ENSACIG00000009786	pum3	88	57.278	ENSGGOG00000006143	PUM3	86	56.150	Gorilla_gorilla
ENSACIG00000009786	pum3	96	76.174	ENSHBUG00000012903	pum3	88	76.325	Haplochromis_burtoni
ENSACIG00000009786	pum3	88	57.386	ENSHGLG00000015868	-	86	56.250	Heterocephalus_glaber_female
ENSACIG00000009786	pum3	88	57.386	ENSHGLG00100018825	PUM3	86	56.250	Heterocephalus_glaber_male
ENSACIG00000009786	pum3	94	73.239	ENSHCOG00000010306	pum3	85	73.158	Hippocampus_comes
ENSACIG00000009786	pum3	89	64.179	ENSIPUG00000024801	pum3	95	60.100	Ictalurus_punctatus
ENSACIG00000009786	pum3	88	57.197	ENSSTOG00000009586	PUM3	86	56.071	Ictidomys_tridecemlineatus
ENSACIG00000009786	pum3	93	54.850	ENSJJAG00000012563	Pum3	87	54.850	Jaculus_jaculus
ENSACIG00000009786	pum3	94	78.407	ENSKMAG00000010277	pum3	88	78.407	Kryptolebias_marmoratus
ENSACIG00000009786	pum3	94	78.369	ENSLBEG00000012213	pum3	86	78.369	Labrus_bergylta
ENSACIG00000009786	pum3	88	56.121	ENSLACG00000008312	PUM3	87	54.690	Latimeria_chalumnae
ENSACIG00000009786	pum3	89	63.687	ENSLOCG00000012529	pum3	85	63.687	Lepisosteus_oculatus
ENSACIG00000009786	pum3	88	57.089	ENSLAFG00000017341	PUM3	86	55.971	Loxodonta_africana
ENSACIG00000009786	pum3	88	57.278	ENSMFAG00000001430	PUM3	86	56.150	Macaca_fascicularis
ENSACIG00000009786	pum3	88	57.278	ENSMMUG00000002362	PUM3	85	56.150	Macaca_mulatta
ENSACIG00000009786	pum3	88	57.278	ENSMNEG00000035288	PUM3	86	56.150	Macaca_nemestrina
ENSACIG00000009786	pum3	88	57.278	ENSMLEG00000034820	PUM3	86	56.150	Mandrillus_leucophaeus
ENSACIG00000009786	pum3	94	78.369	ENSMAMG00000022861	pum3	86	78.369	Mastacembelus_armatus
ENSACIG00000009786	pum3	94	87.257	ENSMZEG00005014205	pum3	85	87.257	Maylandia_zebra
ENSACIG00000009786	pum3	88	51.595	ENSMGAG00000002255	PUM3	86	51.417	Meleagris_gallopavo
ENSACIG00000009786	pum3	88	56.015	ENSMAUG00000009733	Pum3	86	54.965	Mesocricetus_auratus
ENSACIG00000009786	pum3	86	57.006	ENSMICG00000045916	PUM3	75	55.258	Microcebus_murinus
ENSACIG00000009786	pum3	92	54.204	ENSMOCG00000014830	-	88	54.204	Microtus_ochrogaster
ENSACIG00000009786	pum3	88	56.900	ENSMOCG00000019519	-	86	55.793	Microtus_ochrogaster
ENSACIG00000009786	pum3	93	71.147	ENSMMOG00000012184	pum3	89	71.147	Mola_mola
ENSACIG00000009786	pum3	88	55.871	ENSMODG00000015417	PUM3	76	55.676	Monodelphis_domestica
ENSACIG00000009786	pum3	94	80.000	ENSMALG00000022164	pum3	84	80.177	Monopterus_albus
ENSACIG00000009786	pum3	88	55.388	MGP_CAROLIEiJ_G0022845	Pum3	86	54.189	Mus_caroli
ENSACIG00000009786	pum3	88	55.388	ENSMUSG00000041360	Pum3	86	54.189	Mus_musculus
ENSACIG00000009786	pum3	88	55.577	MGP_PahariEiJ_G0014338	Pum3	86	54.367	Mus_pahari
ENSACIG00000009786	pum3	88	55.198	MGP_SPRETEiJ_G0023763	Pum3	86	54.011	Mus_spretus
ENSACIG00000009786	pum3	92	54.286	ENSMPUG00000005125	PUM3	86	54.286	Mustela_putorius_furo
ENSACIG00000009786	pum3	88	56.711	ENSMLUG00000002309	PUM3	86	55.615	Myotis_lucifugus
ENSACIG00000009786	pum3	86	55.086	ENSNGAG00000019468	Pum3	82	54.376	Nannospalax_galili
ENSACIG00000009786	pum3	96	80.870	ENSNBRG00000021370	pum3	88	80.870	Neolamprologus_brichardi
ENSACIG00000009786	pum3	88	57.278	ENSNLEG00000008712	PUM3	86	56.150	Nomascus_leucogenys
ENSACIG00000009786	pum3	81	41.273	ENSMEUG00000013606	-	99	41.502	Notamacropus_eugenii
ENSACIG00000009786	pum3	56	47.384	ENSOPRG00000004225	-	60	45.293	Ochotona_princeps
ENSACIG00000009786	pum3	88	57.467	ENSODEG00000003625	-	86	56.328	Octodon_degus
ENSACIG00000009786	pum3	92	51.510	ENSODEG00000016477	-	86	51.510	Octodon_degus
ENSACIG00000009786	pum3	94	88.475	ENSONIG00000012733	pum3	87	88.475	Oreochromis_niloticus
ENSACIG00000009786	pum3	87	54.563	ENSOANG00000014995	PUM3	98	55.204	Ornithorhynchus_anatinus
ENSACIG00000009786	pum3	86	57.582	ENSOCUG00000004189	-	86	55.793	Oryctolagus_cuniculus
ENSACIG00000009786	pum3	86	57.582	ENSOCUG00000026104	-	87	55.793	Oryctolagus_cuniculus
ENSACIG00000009786	pum3	97	70.000	ENSORLG00000014935	pum3	91	70.000	Oryzias_latipes
ENSACIG00000009786	pum3	97	69.831	ENSORLG00020002841	pum3	91	69.831	Oryzias_latipes_hni
ENSACIG00000009786	pum3	97	70.169	ENSORLG00015015906	pum3	91	70.169	Oryzias_latipes_hsok
ENSACIG00000009786	pum3	94	72.340	ENSOMEG00000009427	pum3	86	72.340	Oryzias_melastigma
ENSACIG00000009786	pum3	88	57.089	ENSOGAG00000008125	-	87	55.732	Otolemur_garnettii
ENSACIG00000009786	pum3	80	46.186	ENSOGAG00000033481	-	84	43.203	Otolemur_garnettii
ENSACIG00000009786	pum3	88	57.519	ENSOARG00000013337	PUM3	84	56.987	Ovis_aries
ENSACIG00000009786	pum3	88	57.278	ENSPPAG00000041337	PUM3	86	56.150	Pan_paniscus
ENSACIG00000009786	pum3	88	56.629	ENSPPRG00000000809	PUM3	86	55.536	Panthera_pardus
ENSACIG00000009786	pum3	88	57.008	ENSPTIG00000021934	PUM3	86	55.893	Panthera_tigris_altaica
ENSACIG00000009786	pum3	88	57.467	ENSPTRG00000020735	PUM3	86	56.328	Pan_troglodytes
ENSACIG00000009786	pum3	88	57.467	ENSPANG00000025118	PUM3	86	56.328	Papio_anubis
ENSACIG00000009786	pum3	94	61.702	ENSPKIG00000022249	pum3	91	59.358	Paramormyrops_kingsleyae
ENSACIG00000009786	pum3	86	58.462	ENSPSIG00000016272	PUM3	86	57.297	Pelodiscus_sinensis
ENSACIG00000009786	pum3	80	73.176	ENSPMGG00000021261	pum3	93	73.176	Periophthalmus_magnuspinnatus
ENSACIG00000009786	pum3	92	44.385	ENSPEMG00000019340	-	84	53.846	Peromyscus_maniculatus_bairdii
ENSACIG00000009786	pum3	92	56.498	ENSPCIG00000030598	PUM3	74	56.498	Phascolarctos_cinereus
ENSACIG00000009786	pum3	88	73.106	ENSPFOG00000001719	pum3	87	73.106	Poecilia_formosa
ENSACIG00000009786	pum3	88	73.295	ENSPLAG00000020010	pum3	88	71.681	Poecilia_latipinna
ENSACIG00000009786	pum3	88	72.917	ENSPMEG00000017451	pum3	88	71.327	Poecilia_mexicana
ENSACIG00000009786	pum3	65	67.500	ENSPREG00000019478	-	66	54.830	Poecilia_reticulata
ENSACIG00000009786	pum3	88	57.656	ENSPPYG00000019255	PUM3	86	56.506	Pongo_abelii
ENSACIG00000009786	pum3	72	61.429	ENSPCAG00000005797	PUM3	62	61.429	Procavia_capensis
ENSACIG00000009786	pum3	88	56.333	ENSPCOG00000027325	PUM3	86	55.258	Propithecus_coquereli
ENSACIG00000009786	pum3	88	57.707	ENSPVAG00000016135	PUM3	78	57.649	Pteropus_vampyrus
ENSACIG00000009786	pum3	97	86.207	ENSPNYG00000016124	pum3	90	86.207	Pundamilia_nyererei
ENSACIG00000009786	pum3	91	60.000	ENSPNAG00000026524	pum3	87	61.818	Pygocentrus_nattereri
ENSACIG00000009786	pum3	88	56.522	ENSRNOG00000012574	Pum3	86	55.437	Rattus_norvegicus
ENSACIG00000009786	pum3	88	56.144	ENSRNOG00000048356	RGD1308750	86	55.080	Rattus_norvegicus
ENSACIG00000009786	pum3	88	57.089	ENSRBIG00000036924	PUM3	86	55.971	Rhinopithecus_bieti
ENSACIG00000009786	pum3	88	57.278	ENSRROG00000041089	PUM3	86	56.150	Rhinopithecus_roxellana
ENSACIG00000009786	pum3	88	57.467	ENSSBOG00000028066	PUM3	86	56.328	Saimiri_boliviensis_boliviensis
ENSACIG00000009786	pum3	88	56.792	ENSSHAG00000003730	PUM3	84	56.284	Sarcophilus_harrisii
ENSACIG00000009786	pum3	92	62.837	ENSSFOG00015018778	pum3	86	62.837	Scleropages_formosus
ENSACIG00000009786	pum3	93	77.639	ENSSMAG00000013236	pum3	87	77.660	Scophthalmus_maximus
ENSACIG00000009786	pum3	94	80.389	ENSSDUG00000001887	pum3	85	80.389	Seriola_dumerili
ENSACIG00000009786	pum3	94	80.389	ENSSLDG00000015766	pum3	86	80.389	Seriola_lalandi_dorsalis
ENSACIG00000009786	pum3	88	53.788	ENSSARG00000000579	PUM3	91	52.398	Sorex_araneus
ENSACIG00000009786	pum3	92	56.443	ENSSPUG00000001707	PUM3	86	56.443	Sphenodon_punctatus
ENSACIG00000009786	pum3	94	77.660	ENSSPAG00000003976	pum3	86	77.660	Stegastes_partitus
ENSACIG00000009786	pum3	88	57.815	ENSSSCG00000005227	PUM3	84	57.273	Sus_scrofa
ENSACIG00000009786	pum3	86	58.269	ENSTGUG00000005339	PUM3	84	57.649	Taeniopygia_guttata
ENSACIG00000009786	pum3	94	78.584	ENSTRUG00000004074	pum3	85	78.584	Takifugu_rubripes
ENSACIG00000009786	pum3	89	78.439	ENSTNIG00000010325	pum3	86	78.439	Tetraodon_nigroviridis
ENSACIG00000009786	pum3	86	41.954	ENSTBEG00000013058	PUM3	82	41.822	Tupaia_belangeri
ENSACIG00000009786	pum3	72	62.857	ENSTTRG00000001062	PUM3	62	62.708	Tursiops_truncatus
ENSACIG00000009786	pum3	88	54.475	ENSUMAG00000018443	PUM3	99	54.475	Ursus_maritimus
ENSACIG00000009786	pum3	88	57.439	ENSVPAG00000010766	PUM3	83	56.909	Vicugna_pacos
ENSACIG00000009786	pum3	88	56.629	ENSVVUG00000006527	PUM3	86	55.536	Vulpes_vulpes
ENSACIG00000009786	pum3	88	47.628	ENSXETG00000011707	pum3	89	46.760	Xenopus_tropicalis
ENSACIG00000009786	pum3	94	67.611	ENSXCOG00000006725	pum3	93	67.611	Xiphophorus_couchianus
ENSACIG00000009786	pum3	94	70.265	ENSXMAG00000002926	pum3	88	70.265	Xiphophorus_maculatus