EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000009846 (Gene tree)
Gene ID
-
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
8203 bases
Position
chrCCOE01001782.1:54292-62494
Accession
ZDB-GENE-030131-3275
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000012641CPSF73-100_CPF11718.82.3e-4811
ENSACIP00000012641Beta-CaspPF10996.89.7e-3411
ENSACIP00000012641Lactamase_BPF00753.274.5e-0811
ENSACIP00000012641RMMBLPF07521.121.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000012995-1899-ENSACIP00000012641632 (aa)--
Gene Model
Click here to download ENSACIG00000009846's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009846's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000009846cpsf39985.535ENSACIG00000023663CPSF39985.535
ENSACIG00000009846cpsf36438.741ENSACIG00000016715ints116838.741
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000009846cpsf39982.803ENSG00000119203CPSF39782.803Homo_sapiens
ENSACIG00000009846cpsf39591.376ENSAPOG00000022087cpsf39991.376Acanthochromis_polyacanthus
ENSACIG00000009846cpsf37194.667ENSAPOG00000012241CPSF38594.667Acanthochromis_polyacanthus
ENSACIG00000009846cpsf39982.962ENSAMEG00000008493CPSF39282.962Ailuropoda_melanoleuca
ENSACIG00000009846cpsf39986.032ENSAOCG00000010077CPSF39986.032Amphiprion_ocellaris
ENSACIG00000009846cpsf310083.843ENSAOCG00000022056cpsf39190.415Amphiprion_ocellaris
ENSACIG00000009846cpsf39986.414ENSAPEG00000021167CPSF39986.414Amphiprion_percula
ENSACIG00000009846cpsf310091.930ENSAPEG00000019526cpsf310091.930Amphiprion_percula
ENSACIG00000009846cpsf39981.340ENSATEG00000014525CPSF39081.340Anabas_testudineus
ENSACIG00000009846cpsf39991.746ENSATEG00000003959cpsf39991.746Anabas_testudineus
ENSACIG00000009846cpsf39982.484ENSAPLG00000006941CPSF39282.484Anas_platyrhynchos
ENSACIG00000009846cpsf39981.081ENSACAG00000001759CPSF39981.081Anolis_carolinensis
ENSACIG00000009846cpsf39978.185ENSANAG00000031254CPSF39378.185Aotus_nancymaae
ENSACIG00000009846cpsf39985.692ENSACLG00000018846CPSF39985.692Astatotilapia_calliptera
ENSACIG00000009846cpsf310094.620ENSACLG00000014484cpsf310094.620Astatotilapia_calliptera
ENSACIG00000009846cpsf39985.016ENSAMXG00000004786cpsf39985.016Astyanax_mexicanus
ENSACIG00000009846cpsf39982.962ENSBTAG00000019735CPSF39282.962Bos_taurus
ENSACIG00000009846cpsf38458.899WBGene00013460cpsf-37758.899Caenorhabditis_elegans
ENSACIG00000009846cpsf39982.643ENSCJAG00000006276CPSF39282.643Callithrix_jacchus
ENSACIG00000009846cpsf39982.962ENSCAFG00000003375CPSF38782.962Canis_familiaris
ENSACIG00000009846cpsf38986.429ENSCAFG00020026799CPSF39086.429Canis_lupus_dingo
ENSACIG00000009846cpsf39982.962ENSCHIG00000013973CPSF39282.962Capra_hircus
ENSACIG00000009846cpsf39982.803ENSTSYG00000002967CPSF39282.803Carlito_syrichta
ENSACIG00000009846cpsf39983.599ENSCAPG00000013851CPSF39483.599Cavia_aperea
ENSACIG00000009846cpsf39983.599ENSCPOG00000011299CPSF39283.599Cavia_porcellus
ENSACIG00000009846cpsf39982.643ENSCCAG00000036730CPSF39382.643Cebus_capucinus
ENSACIG00000009846cpsf39980.604ENSCATG00000014770CPSF39088.994Cercocebus_atys
ENSACIG00000009846cpsf39983.599ENSCLAG00000002727CPSF39283.599Chinchilla_lanigera
ENSACIG00000009846cpsf39974.363ENSCSAG00000007125CPSF39174.363Chlorocebus_sabaeus
ENSACIG00000009846cpsf38961.092ENSCHOG00000000180CPSF38561.092Choloepus_hoffmanni
ENSACIG00000009846cpsf39982.166ENSCPBG00000014074CPSF39182.166Chrysemys_picta_bellii
ENSACIG00000009846cpsf39766.560ENSCING00000007214-8966.560Ciona_intestinalis
ENSACIG00000009846cpsf39973.016ENSCANG00000034435CPSF39173.016Colobus_angolensis_palliatus
ENSACIG00000009846cpsf39982.484ENSCGRG00001013134Cpsf39282.484Cricetulus_griseus_chok1gshd
ENSACIG00000009846cpsf39982.484ENSCGRG00000018319Cpsf39282.484Cricetulus_griseus_crigri
ENSACIG00000009846cpsf39985.103ENSCSEG00000002021CPSF39985.103Cynoglossus_semilaevis
ENSACIG00000009846cpsf39978.810ENSCVAG00000015067CPSF39184.713Cyprinodon_variegatus
ENSACIG00000009846cpsf35081.646ENSCVAG00000022039-9481.646Cyprinodon_variegatus
ENSACIG00000009846cpsf310078.148ENSDARG00000027649cpsf39783.810Danio_rerio
ENSACIG00000009846cpsf39981.876ENSDNOG00000008940CPSF38781.876Dasypus_novemcinctus
ENSACIG00000009846cpsf39484.422ENSDORG00000014263Cpsf39184.422Dipodomys_ordii
ENSACIG00000009846cpsf39864.960FBgn0261065Cpsf739164.960Drosophila_melanogaster
ENSACIG00000009846cpsf39474.372ENSETEG00000003893CPSF39174.372Echinops_telfairi
ENSACIG00000009846cpsf39774.922ENSEBUG00000009018cpsf39074.922Eptatretus_burgeri
ENSACIG00000009846cpsf39982.962ENSEASG00005003970CPSF39282.962Equus_asinus_asinus
ENSACIG00000009846cpsf39982.962ENSECAG00000019911CPSF38987.774Equus_caballus
ENSACIG00000009846cpsf39863.382ENSEEUG00000015422CPSF39963.382Erinaceus_europaeus
ENSACIG00000009846cpsf39987.402ENSELUG00000013775cpsf39987.402Esox_lucius
ENSACIG00000009846cpsf39982.962ENSFCAG00000007852CPSF39782.962Felis_catus
ENSACIG00000009846cpsf39982.222ENSFALG00000006572CPSF39782.222Ficedula_albicollis
ENSACIG00000009846cpsf39982.962ENSFDAG00000006317CPSF39182.962Fukomys_damarensis
ENSACIG00000009846cpsf310082.533ENSFHEG00000014774cpsf39188.978Fundulus_heteroclitus
ENSACIG00000009846cpsf36365.693ENSFHEG00000012186CPSF310065.693Fundulus_heteroclitus
ENSACIG00000009846cpsf310081.304ENSGMOG00000003157cpsf39187.599Gadus_morhua
ENSACIG00000009846cpsf39982.222ENSGALG00000016424CPSF39982.222Gallus_gallus
ENSACIG00000009846cpsf310089.399ENSGAFG00000019449cpsf310089.399Gambusia_affinis
ENSACIG00000009846cpsf310079.016ENSGAFG00000008016CPSF39184.921Gambusia_affinis
ENSACIG00000009846cpsf37379.229ENSGAGG00000025583CPSF39379.229Gopherus_agassizii
ENSACIG00000009846cpsf39982.803ENSGGOG00000001757CPSF39982.803Gorilla_gorilla
ENSACIG00000009846cpsf36379.319ENSHBUG00000014332CPSF310079.319Haplochromis_burtoni
ENSACIG00000009846cpsf310094.620ENSHBUG00000001188cpsf310094.620Haplochromis_burtoni
ENSACIG00000009846cpsf39983.121ENSHGLG00000000666CPSF39183.121Heterocephalus_glaber_female
ENSACIG00000009846cpsf39983.121ENSHGLG00100007765CPSF39183.121Heterocephalus_glaber_male
ENSACIG00000009846cpsf39977.939ENSHCOG00000015957CPSF39083.917Hippocampus_comes
ENSACIG00000009846cpsf39981.606ENSHCOG00000007251cpsf39188.141Hippocampus_comes
ENSACIG00000009846cpsf39984.858ENSIPUG00000023488cpsf39985.331Ictalurus_punctatus
ENSACIG00000009846cpsf39982.484ENSSTOG00000004476CPSF39282.484Ictidomys_tridecemlineatus
ENSACIG00000009846cpsf39981.905ENSJJAG00000023415Cpsf39281.905Jaculus_jaculus
ENSACIG00000009846cpsf310082.969ENSKMAG00000002806cpsf39189.617Kryptolebias_marmoratus
ENSACIG00000009846cpsf39978.520ENSKMAG00000007317CPSF39184.236Kryptolebias_marmoratus
ENSACIG00000009846cpsf35987.097ENSLBEG00000015018-9987.097Labrus_bergylta
ENSACIG00000009846cpsf39977.047ENSLBEG00000020569cpsf38682.986Labrus_bergylta
ENSACIG00000009846cpsf39485.595ENSLBEG00000013492CPSF39085.595Labrus_bergylta
ENSACIG00000009846cpsf39977.021ENSLACG00000008308CPSF39177.021Latimeria_chalumnae
ENSACIG00000009846cpsf310077.633ENSLOCG00000016823cpsf39183.544Lepisosteus_oculatus
ENSACIG00000009846cpsf39982.803ENSLAFG00000009467CPSF39282.803Loxodonta_africana
ENSACIG00000009846cpsf39982.643ENSMFAG00000001339CPSF39782.643Macaca_fascicularis
ENSACIG00000009846cpsf39982.643ENSMMUG00000018038CPSF39782.643Macaca_mulatta
ENSACIG00000009846cpsf38991.960ENSMNEG00000039447CPSF39191.960Macaca_nemestrina
ENSACIG00000009846cpsf39982.803ENSMLEG00000026825CPSF38293.976Mandrillus_leucophaeus
ENSACIG00000009846cpsf310086.234ENSMAMG00000003076cpsf310086.234Mastacembelus_armatus
ENSACIG00000009846cpsf39985.827ENSMAMG00000008835CPSF39985.827Mastacembelus_armatus
ENSACIG00000009846cpsf39985.692ENSMZEG00005006258CPSF39985.692Maylandia_zebra
ENSACIG00000009846cpsf310094.620ENSMZEG00005014358cpsf310094.620Maylandia_zebra
ENSACIG00000009846cpsf39982.222ENSMGAG00000013995CPSF39482.222Meleagris_gallopavo
ENSACIG00000009846cpsf35874.599ENSMAUG00000000166Cpsf39974.599Mesocricetus_auratus
ENSACIG00000009846cpsf39977.971ENSMICG00000002363CPSF39877.971Microcebus_murinus
ENSACIG00000009846cpsf39980.096ENSMOCG00000020067Cpsf39180.096Microtus_ochrogaster
ENSACIG00000009846cpsf39984.455ENSMMOG00000018212CPSF39584.455Mola_mola
ENSACIG00000009846cpsf37879.078ENSMMOG00000011923CPSF38579.078Mola_mola
ENSACIG00000009846cpsf39980.691ENSMODG00000014703CPSF39280.691Monodelphis_domestica
ENSACIG00000009846cpsf310091.772ENSMALG00000016416cpsf310091.772Monopterus_albus
ENSACIG00000009846cpsf39683.744ENSMALG00000011474CPSF39583.744Monopterus_albus
ENSACIG00000009846cpsf39982.803MGP_CAROLIEiJ_G0017640Cpsf39282.803Mus_caroli
ENSACIG00000009846cpsf39982.803ENSMUSG00000054309Cpsf39192.760Mus_musculus
ENSACIG00000009846cpsf39982.643MGP_PahariEiJ_G0029397Cpsf39282.643Mus_pahari
ENSACIG00000009846cpsf39982.803MGP_SPRETEiJ_G0018481Cpsf39282.803Mus_spretus
ENSACIG00000009846cpsf39982.989ENSMPUG00000013213CPSF39282.989Mustela_putorius_furo
ENSACIG00000009846cpsf39982.671ENSMLUG00000010636CPSF39282.671Myotis_lucifugus
ENSACIG00000009846cpsf39982.484ENSNGAG00000019836Cpsf39282.484Nannospalax_galili
ENSACIG00000009846cpsf39985.692ENSNBRG00000010525CPSF39985.692Neolamprologus_brichardi
ENSACIG00000009846cpsf310094.146ENSNBRG00000004770cpsf310094.146Neolamprologus_brichardi
ENSACIG00000009846cpsf39982.643ENSNLEG00000013359CPSF39782.643Nomascus_leucogenys
ENSACIG00000009846cpsf39953.025ENSMEUG00000013117-9253.025Notamacropus_eugenii
ENSACIG00000009846cpsf39973.768ENSOPRG00000008902CPSF39273.768Ochotona_princeps
ENSACIG00000009846cpsf39983.758ENSODEG00000003129CPSF39283.758Octodon_degus
ENSACIG00000009846cpsf310086.754ENSONIG00000018812cpsf39193.610Oreochromis_niloticus
ENSACIG00000009846cpsf38882.028ENSOANG00000008577CPSF39982.028Ornithorhynchus_anatinus
ENSACIG00000009846cpsf39982.962ENSOCUG00000003728CPSF39282.962Oryctolagus_cuniculus
ENSACIG00000009846cpsf310081.214ENSORLG00000018854cpsf39187.639Oryzias_latipes
ENSACIG00000009846cpsf310088.924ENSORLG00020013331cpsf310088.924Oryzias_latipes_hni
ENSACIG00000009846cpsf310088.766ENSORLG00015011017cpsf310088.766Oryzias_latipes_hsok
ENSACIG00000009846cpsf310081.214ENSOMEG00000010647cpsf38787.639Oryzias_melastigma
ENSACIG00000009846cpsf39972.452ENSOGAG00000001680CPSF39172.452Otolemur_garnettii
ENSACIG00000009846cpsf39982.962ENSOARG00000015073CPSF39282.962Ovis_aries
ENSACIG00000009846cpsf39982.803ENSPPAG00000042457CPSF39282.803Pan_paniscus
ENSACIG00000009846cpsf39982.962ENSPPRG00000016790CPSF39783.121Panthera_pardus
ENSACIG00000009846cpsf39982.962ENSPTIG00000003920CPSF39983.121Panthera_tigris_altaica
ENSACIG00000009846cpsf39982.803ENSPTRG00000011638CPSF39282.803Pan_troglodytes
ENSACIG00000009846cpsf39982.803ENSPANG00000016798CPSF38491.142Papio_anubis
ENSACIG00000009846cpsf310085.871ENSPKIG00000023646cpsf310085.871Paramormyrops_kingsleyae
ENSACIG00000009846cpsf39981.905ENSPSIG00000016144CPSF39281.905Pelodiscus_sinensis
ENSACIG00000009846cpsf310086.076ENSPMGG00000006141-10086.076Periophthalmus_magnuspinnatus
ENSACIG00000009846cpsf36377.778ENSPMGG00000015311CPSF310077.778Periophthalmus_magnuspinnatus
ENSACIG00000009846cpsf39982.484ENSPEMG00000017668Cpsf39282.643Peromyscus_maniculatus_bairdii
ENSACIG00000009846cpsf37687.397ENSPMAG00000004841cpsf38987.397Petromyzon_marinus
ENSACIG00000009846cpsf39982.166ENSPCIG00000009823CPSF39282.927Phascolarctos_cinereus
ENSACIG00000009846cpsf310082.070ENSPFOG00000015922cpsf39188.480Poecilia_formosa
ENSACIG00000009846cpsf310078.582ENSPFOG00000010418-9184.603Poecilia_formosa
ENSACIG00000009846cpsf36379.064ENSPLAG00000021300-10079.064Poecilia_latipinna
ENSACIG00000009846cpsf310082.070ENSPLAG00000000882cpsf39188.480Poecilia_latipinna
ENSACIG00000009846cpsf310082.216ENSPMEG00000018309cpsf39188.640Poecilia_mexicana
ENSACIG00000009846cpsf310089.399ENSPREG00000014875cpsf310089.399Poecilia_reticulata
ENSACIG00000009846cpsf310073.478ENSPREG00000004482CPSF39078.855Poecilia_reticulata
ENSACIG00000009846cpsf39978.185ENSPPYG00000012666CPSF39178.185Pongo_abelii
ENSACIG00000009846cpsf37664.301ENSPCAG00000015042CPSF37364.301Procavia_capensis
ENSACIG00000009846cpsf38779.832ENSPCOG00000023016CPSF38979.832Propithecus_coquereli
ENSACIG00000009846cpsf39982.830ENSPVAG00000005324CPSF39282.830Pteropus_vampyrus
ENSACIG00000009846cpsf38791.971ENSPNYG00000021047CPSF39191.971Pundamilia_nyererei
ENSACIG00000009846cpsf310094.620ENSPNYG00000004405cpsf310094.620Pundamilia_nyererei
ENSACIG00000009846cpsf39985.669ENSPNAG00000023060cpsf39985.669Pygocentrus_nattereri
ENSACIG00000009846cpsf39982.803ENSRNOG00000052418Cpsf39182.803Rattus_norvegicus
ENSACIG00000009846cpsf39978.981ENSRBIG00000041615CPSF39678.981Rhinopithecus_bieti
ENSACIG00000009846cpsf39982.803ENSRROG00000033792CPSF39282.803Rhinopithecus_roxellana
ENSACIG00000009846cpsf38341.544YLR277CYSH17841.544Saccharomyces_cerevisiae
ENSACIG00000009846cpsf39978.639ENSSBOG00000027263CPSF39178.639Saimiri_boliviensis_boliviensis
ENSACIG00000009846cpsf39982.325ENSSHAG00000007024CPSF39282.325Sarcophilus_harrisii
ENSACIG00000009846cpsf310085.377ENSSFOG00015002108cpsf310085.377Scleropages_formosus
ENSACIG00000009846cpsf39579.756ENSSMAG00000020534CPSF38786.242Scophthalmus_maximus
ENSACIG00000009846cpsf39986.120ENSSDUG00000018498CPSF39986.120Seriola_dumerili
ENSACIG00000009846cpsf310084.279ENSSDUG00000002828cpsf38890.735Seriola_dumerili
ENSACIG00000009846cpsf39986.667ENSSLDG00000005234CPSF39986.667Seriola_lalandi_dorsalis
ENSACIG00000009846cpsf310083.988ENSSLDG00000008469cpsf38890.415Seriola_lalandi_dorsalis
ENSACIG00000009846cpsf39967.516ENSSARG00000005186CPSF39267.516Sorex_araneus
ENSACIG00000009846cpsf39981.329ENSSPUG00000015525CPSF39181.329Sphenodon_punctatus
ENSACIG00000009846cpsf39986.349ENSSPAG00000002906CPSF39986.349Stegastes_partitus
ENSACIG00000009846cpsf310083.552ENSSPAG00000018579cpsf39190.415Stegastes_partitus
ENSACIG00000009846cpsf39884.160ENSSSCG00000020799CPSF39984.160Sus_scrofa
ENSACIG00000009846cpsf39981.905ENSTGUG00000013016CPSF39281.905Taeniopygia_guttata
ENSACIG00000009846cpsf36370.936ENSTRUG00000013905CPSF39970.936Takifugu_rubripes
ENSACIG00000009846cpsf39981.050ENSTRUG00000007030cpsf39783.750Takifugu_rubripes
ENSACIG00000009846cpsf36686.495ENSTBEG00000002707CPSF36386.495Tupaia_belangeri
ENSACIG00000009846cpsf38567.222ENSTTRG00000000861CPSF37967.222Tursiops_truncatus
ENSACIG00000009846cpsf39583.940ENSUAMG00000007535CPSF38683.940Ursus_americanus
ENSACIG00000009846cpsf39982.962ENSUMAG00000003676CPSF39782.962Ursus_maritimus
ENSACIG00000009846cpsf39483.752ENSVPAG00000008041CPSF39483.752Vicugna_pacos
ENSACIG00000009846cpsf39982.962ENSVVUG00000002194CPSF39282.962Vulpes_vulpes
ENSACIG00000009846cpsf39981.558ENSXETG00000008263cpsf39181.558Xenopus_tropicalis
ENSACIG00000009846cpsf35877.480ENSXCOG00000000957-8777.480Xiphophorus_couchianus
ENSACIG00000009846cpsf310081.778ENSXCOG00000019695cpsf39188.160Xiphophorus_couchianus
ENSACIG00000009846cpsf310078.726ENSXMAG00000027291CPSF39184.603Xiphophorus_maculatus
ENSACIG00000009846cpsf39988.179ENSXMAG00000009784cpsf39788.179Xiphophorus_maculatus

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