EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000009875 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 58132 bases
Position: chrCCOE01000287.1:4950240-5008371
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000012741	S1	PF00575.23	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000013095	-	2967	-	ENSACIP00000012741	988 (aa)	-	-

Gene Model

Click here to download ENSACIG00000009875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000009875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000009875	si:ch211-117n7.8	97	52.911	ENSG00000068784	SRBD1	94	52.899	Homo_sapiens
ENSACIG00000009875	si:ch211-117n7.8	100	82.947	ENSAPOG00000005103	si:ch211-117n7.8	97	82.947	Acanthochromis_polyacanthus
ENSACIG00000009875	si:ch211-117n7.8	87	57.241	ENSAMEG00000005993	SRBD1	83	58.095	Ailuropoda_melanoleuca
ENSACIG00000009875	si:ch211-117n7.8	100	81.616	ENSAOCG00000024718	si:ch211-117n7.8	97	81.515	Amphiprion_ocellaris
ENSACIG00000009875	si:ch211-117n7.8	100	80.707	ENSAPEG00000002645	si:ch211-117n7.8	99	80.808	Amphiprion_percula
ENSACIG00000009875	si:ch211-117n7.8	100	80.890	ENSATEG00000010844	si:ch211-117n7.8	97	80.586	Anabas_testudineus
ENSACIG00000009875	si:ch211-117n7.8	97	53.436	ENSAPLG00000006313	SRBD1	97	52.448	Anas_platyrhynchos
ENSACIG00000009875	si:ch211-117n7.8	97	52.707	ENSANAG00000025573	SRBD1	95	52.637	Aotus_nancymaae
ENSACIG00000009875	si:ch211-117n7.8	100	86.680	ENSACLG00000024219	si:ch211-117n7.8	97	87.790	Astatotilapia_calliptera
ENSACIG00000009875	si:ch211-117n7.8	100	65.327	ENSAMXG00000004294	SRBD1	97	66.333	Astyanax_mexicanus
ENSACIG00000009875	si:ch211-117n7.8	85	58.118	ENSBTAG00000007508	SRBD1	80	58.076	Bos_taurus
ENSACIG00000009875	si:ch211-117n7.8	97	52.454	ENSCJAG00000000727	SRBD1	83	57.432	Callithrix_jacchus
ENSACIG00000009875	si:ch211-117n7.8	91	55.531	ENSCAFG00000002554	SRBD1	90	55.263	Canis_familiaris
ENSACIG00000009875	si:ch211-117n7.8	97	50.668	ENSCAFG00020026284	SRBD1	96	58.243	Canis_lupus_dingo
ENSACIG00000009875	si:ch211-117n7.8	85	57.882	ENSCHIG00000016535	SRBD1	82	57.770	Capra_hircus
ENSACIG00000009875	si:ch211-117n7.8	99	52.282	ENSTSYG00000012797	SRBD1	97	52.083	Carlito_syrichta
ENSACIG00000009875	si:ch211-117n7.8	96	53.910	ENSCPOG00000004773	SRBD1	95	53.605	Cavia_porcellus
ENSACIG00000009875	si:ch211-117n7.8	97	52.935	ENSCCAG00000025589	SRBD1	83	57.669	Cebus_capucinus
ENSACIG00000009875	si:ch211-117n7.8	97	52.863	ENSCATG00000039530	SRBD1	83	57.788	Cercocebus_atys
ENSACIG00000009875	si:ch211-117n7.8	96	54.175	ENSCLAG00000008623	SRBD1	95	54.175	Chinchilla_lanigera
ENSACIG00000009875	si:ch211-117n7.8	85	57.746	ENSCSAG00000013350	SRBD1	83	57.669	Chlorocebus_sabaeus
ENSACIG00000009875	si:ch211-117n7.8	83	72.093	ENSCHOG00000003805	SRBD1	69	72.093	Choloepus_hoffmanni
ENSACIG00000009875	si:ch211-117n7.8	98	53.043	ENSCPBG00000005677	SRBD1	97	52.079	Chrysemys_picta_bellii
ENSACIG00000009875	si:ch211-117n7.8	80	39.900	ENSCING00000005950	-	99	39.776	Ciona_intestinalis
ENSACIG00000009875	si:ch211-117n7.8	80	42.045	ENSCSAVG00000000861	-	99	41.919	Ciona_savignyi
ENSACIG00000009875	si:ch211-117n7.8	99	51.844	ENSCANG00000016307	SRBD1	83	57.551	Colobus_angolensis_palliatus
ENSACIG00000009875	si:ch211-117n7.8	85	57.177	ENSCGRG00001000513	Srbd1	83	57.074	Cricetulus_griseus_chok1gshd
ENSACIG00000009875	si:ch211-117n7.8	85	57.177	ENSCGRG00000002283	Srbd1	83	57.074	Cricetulus_griseus_crigri
ENSACIG00000009875	si:ch211-117n7.8	100	73.058	ENSCSEG00000000856	si:ch211-117n7.8	97	72.599	Cynoglossus_semilaevis
ENSACIG00000009875	si:ch211-117n7.8	88	84.296	ENSCVAG00000020212	si:ch211-117n7.8	92	83.834	Cyprinodon_variegatus
ENSACIG00000009875	si:ch211-117n7.8	85	56.975	ENSDNOG00000018686	SRBD1	83	56.738	Dasypus_novemcinctus
ENSACIG00000009875	si:ch211-117n7.8	85	57.770	ENSDORG00000010468	Srbd1	83	57.706	Dipodomys_ordii
ENSACIG00000009875	si:ch211-117n7.8	80	35.768	FBgn0051156	CG31156	79	35.849	Drosophila_melanogaster
ENSACIG00000009875	si:ch211-117n7.8	75	57.923	ENSETEG00000000739	SRBD1	76	57.741	Echinops_telfairi
ENSACIG00000009875	si:ch211-117n7.8	73	48.153	ENSEBUG00000008902	si:ch211-117n7.8	95	47.880	Eptatretus_burgeri
ENSACIG00000009875	si:ch211-117n7.8	97	50.868	ENSEASG00005003132	SRBD1	97	56.688	Equus_asinus_asinus
ENSACIG00000009875	si:ch211-117n7.8	85	57.796	ENSECAG00000013865	SRBD1	81	57.770	Equus_caballus
ENSACIG00000009875	si:ch211-117n7.8	100	65.916	ENSELUG00000012592	si:ch211-117n7.8	97	65.524	Esox_lucius
ENSACIG00000009875	si:ch211-117n7.8	85	57.913	ENSFCAG00000005101	SRBD1	83	57.888	Felis_catus
ENSACIG00000009875	si:ch211-117n7.8	85	57.533	ENSFALG00000012966	SRBD1	84	57.401	Ficedula_albicollis
ENSACIG00000009875	si:ch211-117n7.8	96	53.935	ENSFDAG00000016670	SRBD1	97	53.725	Fukomys_damarensis
ENSACIG00000009875	si:ch211-117n7.8	100	79.293	ENSFHEG00000019480	si:ch211-117n7.8	97	79.293	Fundulus_heteroclitus
ENSACIG00000009875	si:ch211-117n7.8	51	71.831	ENSGMOG00000018010	-	100	71.831	Gadus_morhua
ENSACIG00000009875	si:ch211-117n7.8	98	52.579	ENSGALG00000009990	SRBD1	97	51.957	Gallus_gallus
ENSACIG00000009875	si:ch211-117n7.8	100	78.766	ENSGAFG00000019664	si:ch211-117n7.8	97	78.766	Gambusia_affinis
ENSACIG00000009875	si:ch211-117n7.8	63	82.171	ENSGACG00000010794	si:ch211-117n7.8	100	82.326	Gasterosteus_aculeatus
ENSACIG00000009875	si:ch211-117n7.8	85	57.477	ENSGAGG00000006166	SRBD1	99	57.788	Gopherus_agassizii
ENSACIG00000009875	si:ch211-117n7.8	97	53.115	ENSGGOG00000005910	SRBD1	97	53.106	Gorilla_gorilla
ENSACIG00000009875	si:ch211-117n7.8	100	72.553	ENSHBUG00000013207	si:ch211-117n7.8	99	72.553	Haplochromis_burtoni
ENSACIG00000009875	si:ch211-117n7.8	96	53.505	ENSHGLG00000018153	-	96	53.505	Heterocephalus_glaber_female
ENSACIG00000009875	si:ch211-117n7.8	96	53.505	ENSHGLG00100015183	-	96	53.505	Heterocephalus_glaber_male
ENSACIG00000009875	si:ch211-117n7.8	97	65.109	ENSIPUG00000009661	srbd1	97	64.516	Ictalurus_punctatus
ENSACIG00000009875	si:ch211-117n7.8	97	53.299	ENSSTOG00000005898	SRBD1	83	58.901	Ictidomys_tridecemlineatus
ENSACIG00000009875	si:ch211-117n7.8	98	50.304	ENSJJAG00000022244	Srbd1	94	50.938	Jaculus_jaculus
ENSACIG00000009875	si:ch211-117n7.8	100	81.616	ENSKMAG00000003473	si:ch211-117n7.8	97	80.972	Kryptolebias_marmoratus
ENSACIG00000009875	si:ch211-117n7.8	100	81.837	ENSLBEG00000027518	si:ch211-117n7.8	97	81.837	Labrus_bergylta
ENSACIG00000009875	si:ch211-117n7.8	85	58.061	ENSLACG00000009790	SRBD1	97	58.095	Latimeria_chalumnae
ENSACIG00000009875	si:ch211-117n7.8	99	60.983	ENSLOCG00000016360	si:ch211-117n7.8	96	59.248	Lepisosteus_oculatus
ENSACIG00000009875	si:ch211-117n7.8	97	53.013	ENSMFAG00000042026	SRBD1	83	57.669	Macaca_fascicularis
ENSACIG00000009875	si:ch211-117n7.8	85	57.746	ENSMMUG00000003490	SRBD1	83	57.669	Macaca_mulatta
ENSACIG00000009875	si:ch211-117n7.8	97	51.583	ENSMNEG00000034701	SRBD1	83	56.005	Macaca_nemestrina
ENSACIG00000009875	si:ch211-117n7.8	97	52.911	ENSMLEG00000000745	SRBD1	83	57.788	Mandrillus_leucophaeus
ENSACIG00000009875	si:ch211-117n7.8	100	79.980	ENSMAMG00000021921	si:ch211-117n7.8	97	80.303	Mastacembelus_armatus
ENSACIG00000009875	si:ch211-117n7.8	100	87.992	ENSMZEG00005027369	si:ch211-117n7.8	97	87.992	Maylandia_zebra
ENSACIG00000009875	si:ch211-117n7.8	81	55.665	ENSMGAG00000010273	SRBD1	99	55.734	Meleagris_gallopavo
ENSACIG00000009875	si:ch211-117n7.8	80	56.015	ENSMAUG00000013916	Srbd1	95	55.772	Mesocricetus_auratus
ENSACIG00000009875	si:ch211-117n7.8	97	53.783	ENSMICG00000007835	SRBD1	95	54.046	Microcebus_murinus
ENSACIG00000009875	si:ch211-117n7.8	85	56.532	ENSMOCG00000018716	Srbd1	83	56.527	Microtus_ochrogaster
ENSACIG00000009875	si:ch211-117n7.8	100	77.140	ENSMMOG00000007507	si:ch211-117n7.8	100	77.140	Mola_mola
ENSACIG00000009875	si:ch211-117n7.8	100	80.785	ENSMALG00000001562	si:ch211-117n7.8	97	80.986	Monopterus_albus
ENSACIG00000009875	si:ch211-117n7.8	91	54.984	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.224	Mus_caroli
ENSACIG00000009875	si:ch211-117n7.8	91	54.984	ENSMUSG00000024135	Srbd1	99	55.072	Mus_musculus
ENSACIG00000009875	si:ch211-117n7.8	91	54.015	MGP_PahariEiJ_G0020924	Srbd1	91	53.965	Mus_pahari
ENSACIG00000009875	si:ch211-117n7.8	91	54.874	MGP_SPRETEiJ_G0022850	Srbd1	91	54.515	Mus_spretus
ENSACIG00000009875	si:ch211-117n7.8	85	57.845	ENSMLUG00000007039	SRBD1	83	57.957	Myotis_lucifugus
ENSACIG00000009875	si:ch211-117n7.8	85	55.670	ENSNGAG00000011893	Srbd1	83	55.736	Nannospalax_galili
ENSACIG00000009875	si:ch211-117n7.8	100	82.779	ENSNBRG00000012873	si:ch211-117n7.8	99	82.779	Neolamprologus_brichardi
ENSACIG00000009875	si:ch211-117n7.8	97	52.809	ENSNLEG00000016877	SRBD1	94	52.795	Nomascus_leucogenys
ENSACIG00000009875	si:ch211-117n7.8	85	57.497	ENSODEG00000012095	SRBD1	86	57.497	Octodon_degus
ENSACIG00000009875	si:ch211-117n7.8	100	87.992	ENSONIG00000000945	si:ch211-117n7.8	99	88.005	Oreochromis_niloticus
ENSACIG00000009875	si:ch211-117n7.8	97	52.572	ENSOCUG00000015385	SRBD1	95	53.174	Oryctolagus_cuniculus
ENSACIG00000009875	si:ch211-117n7.8	100	73.690	ENSORLG00000004427	si:ch211-117n7.8	97	73.690	Oryzias_latipes
ENSACIG00000009875	si:ch211-117n7.8	100	76.838	ENSORLG00020012792	si:ch211-117n7.8	97	76.838	Oryzias_latipes_hni
ENSACIG00000009875	si:ch211-117n7.8	100	76.512	ENSORLG00015018598	si:ch211-117n7.8	97	76.512	Oryzias_latipes_hsok
ENSACIG00000009875	si:ch211-117n7.8	99	75.935	ENSOMEG00000012229	si:ch211-117n7.8	96	81.061	Oryzias_melastigma
ENSACIG00000009875	si:ch211-117n7.8	85	56.155	ENSOGAG00000001076	SRBD1	83	55.687	Otolemur_garnettii
ENSACIG00000009875	si:ch211-117n7.8	85	53.785	ENSOARG00000005958	SRBD1	84	53.645	Ovis_aries
ENSACIG00000009875	si:ch211-117n7.8	97	52.410	ENSPPAG00000038442	SRBD1	94	52.795	Pan_paniscus
ENSACIG00000009875	si:ch211-117n7.8	85	57.981	ENSPPRG00000003449	SRBD1	83	58.026	Panthera_pardus
ENSACIG00000009875	si:ch211-117n7.8	85	57.981	ENSPTIG00000012495	SRBD1	83	58.026	Panthera_tigris_altaica
ENSACIG00000009875	si:ch211-117n7.8	97	52.615	ENSPTRG00000011889	SRBD1	94	53.002	Pan_troglodytes
ENSACIG00000009875	si:ch211-117n7.8	85	57.746	ENSPANG00000008063	SRBD1	83	57.669	Papio_anubis
ENSACIG00000009875	si:ch211-117n7.8	99	61.842	ENSPKIG00000021973	si:ch211-117n7.8	97	60.636	Paramormyrops_kingsleyae
ENSACIG00000009875	si:ch211-117n7.8	85	57.379	ENSPSIG00000008992	SRBD1	84	57.227	Pelodiscus_sinensis
ENSACIG00000009875	si:ch211-117n7.8	93	75.515	ENSPMGG00000013348	si:ch211-117n7.8	98	73.077	Periophthalmus_magnuspinnatus
ENSACIG00000009875	si:ch211-117n7.8	85	55.787	ENSPEMG00000020684	Srbd1	83	55.673	Peromyscus_maniculatus_bairdii
ENSACIG00000009875	si:ch211-117n7.8	100	79.738	ENSPFOG00000010650	si:ch211-117n7.8	97	79.617	Poecilia_formosa
ENSACIG00000009875	si:ch211-117n7.8	100	79.717	ENSPLAG00000002141	si:ch211-117n7.8	97	79.596	Poecilia_latipinna
ENSACIG00000009875	si:ch211-117n7.8	100	79.637	ENSPMEG00000018537	si:ch211-117n7.8	97	79.717	Poecilia_mexicana
ENSACIG00000009875	si:ch211-117n7.8	100	77.117	ENSPREG00000003258	si:ch211-117n7.8	97	77.071	Poecilia_reticulata
ENSACIG00000009875	si:ch211-117n7.8	97	49.567	ENSPPYG00000012444	SRBD1	83	53.274	Pongo_abelii
ENSACIG00000009875	si:ch211-117n7.8	77	52.431	ENSPCAG00000005629	SRBD1	80	52.431	Procavia_capensis
ENSACIG00000009875	si:ch211-117n7.8	97	45.427	ENSPCOG00000017669	SRBD1	94	45.473	Propithecus_coquereli
ENSACIG00000009875	si:ch211-117n7.8	85	50.352	ENSPVAG00000001782	SRBD1	83	50.475	Pteropus_vampyrus
ENSACIG00000009875	si:ch211-117n7.8	100	80.020	ENSPNYG00000000508	si:ch211-117n7.8	99	80.020	Pundamilia_nyererei
ENSACIG00000009875	si:ch211-117n7.8	96	66.285	ENSPNAG00000013492	SRBD1	97	64.688	Pygocentrus_nattereri
ENSACIG00000009875	si:ch211-117n7.8	84	56.287	ENSRNOG00000014720	Srbd1	83	56.490	Rattus_norvegicus
ENSACIG00000009875	si:ch211-117n7.8	97	52.929	ENSRBIG00000033486	SRBD1	83	57.432	Rhinopithecus_bieti
ENSACIG00000009875	si:ch211-117n7.8	97	52.929	ENSRROG00000041599	SRBD1	83	57.432	Rhinopithecus_roxellana
ENSACIG00000009875	si:ch211-117n7.8	97	52.400	ENSSBOG00000024982	SRBD1	83	57.194	Saimiri_boliviensis_boliviensis
ENSACIG00000009875	si:ch211-117n7.8	88	66.207	ENSSFOG00015001128	si:ch211-117n7.8	94	66.053	Scleropages_formosus
ENSACIG00000009875	si:ch211-117n7.8	100	81.087	ENSSMAG00000018256	si:ch211-117n7.8	97	81.087	Scophthalmus_maximus
ENSACIG00000009875	si:ch211-117n7.8	96	83.368	ENSSLDG00000023189	si:ch211-117n7.8	99	83.019	Seriola_lalandi_dorsalis
ENSACIG00000009875	si:ch211-117n7.8	95	50.000	ENSSARG00000009740	SRBD1	84	53.341	Sorex_araneus
ENSACIG00000009875	si:ch211-117n7.8	85	59.193	ENSSPUG00000010475	SRBD1	92	58.753	Sphenodon_punctatus
ENSACIG00000009875	si:ch211-117n7.8	95	80.085	ENSSPAG00000008092	-	99	77.362	Stegastes_partitus
ENSACIG00000009875	si:ch211-117n7.8	85	58.314	ENSSSCG00000008445	SRBD1	81	57.533	Sus_scrofa
ENSACIG00000009875	si:ch211-117n7.8	85	57.547	ENSTGUG00000003878	SRBD1	99	57.313	Taeniopygia_guttata
ENSACIG00000009875	si:ch211-117n7.8	100	73.568	ENSTRUG00000007080	si:ch211-117n7.8	98	78.231	Takifugu_rubripes
ENSACIG00000009875	si:ch211-117n7.8	99	72.393	ENSTNIG00000007464	si:ch211-117n7.8	97	72.195	Tetraodon_nigroviridis
ENSACIG00000009875	si:ch211-117n7.8	68	79.787	ENSTBEG00000004556	SRBD1	53	79.787	Tupaia_belangeri
ENSACIG00000009875	si:ch211-117n7.8	77	59.788	ENSTTRG00000011871	SRBD1	74	59.783	Tursiops_truncatus
ENSACIG00000009875	si:ch211-117n7.8	85	58.235	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSACIG00000009875	si:ch211-117n7.8	85	58.235	ENSUMAG00000012902	SRBD1	82	58.126	Ursus_maritimus
ENSACIG00000009875	si:ch211-117n7.8	86	56.895	ENSVPAG00000006825	SRBD1	91	57.075	Vicugna_pacos
ENSACIG00000009875	si:ch211-117n7.8	90	55.850	ENSVVUG00000005389	SRBD1	89	55.580	Vulpes_vulpes
ENSACIG00000009875	si:ch211-117n7.8	99	45.043	ENSXETG00000002760	srbd1	96	44.402	Xenopus_tropicalis
ENSACIG00000009875	si:ch211-117n7.8	100	79.112	ENSXMAG00000016861	si:ch211-117n7.8	97	78.969	Xiphophorus_maculatus